Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 RAC1P8-201ENST00000427086 527 ntBASIC2.52□□□□□ -2.01
TREX1Q9NSU2 Z93242.1-201ENST00000427102 353 ntBASIC2.52□□□□□ -2.01
TREX1Q9NSU2 AC092427.1-202ENST00000430569 476 ntBASIC2.52□□□□□ -2.01
TREX1Q9NSU2 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC2.52□□□□□ -2.01
TREX1Q9NSU2 AL512637.2-201ENST00000431287 1256 ntBASIC2.52□□□□□ -2.01
TREX1Q9NSU2 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC2.52□□□□□ -2.01
TREX1Q9NSU2 AC004866.2-201ENST00000438285 481 ntBASIC2.52□□□□□ -2.01
TREX1Q9NSU2 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC2.52□□□□□ -2.01
TREX1Q9NSU2 RFC5P1-201ENST00000454419 874 ntBASIC2.52□□□□□ -2.01
TREX1Q9NSU2 AL359385.1-201ENST00000456509 365 ntBASIC2.52□□□□□ -2.01
TREX1Q9NSU2 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC2.52□□□□□ -2.01
TREX1Q9NSU2 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.52□□□□□ -2.01
TREX1Q9NSU2 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.52□□□□□ -2.01
TREX1Q9NSU2 AC010625.1-201ENST00000511296 403 ntBASIC2.52□□□□□ -2.01
TREX1Q9NSU2 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
TREX1Q9NSU2 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.52□□□□□ -2.01
TREX1Q9NSU2 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
TREX1Q9NSU2 MTCYBP27-201ENST00000555160 670 ntBASIC2.52□□□□□ -2.01
TREX1Q9NSU2 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC2.52□□□□□ -2.01
TREX1Q9NSU2 AC103810.1-201ENST00000579873 453 ntBASIC2.52□□□□□ -2.01
TREX1Q9NSU2 LARP7P3-201ENST00000579888 337 ntBASIC2.52□□□□□ -2.01
TREX1Q9NSU2 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.52□□□□□ -2.01
TREX1Q9NSU2 AC060766.3-201ENST00000591442 263 ntBASIC2.52□□□□□ -2.01
TREX1Q9NSU2 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC2.52□□□□□ -2.01
TREX1Q9NSU2 AL035413.2-201ENST00000604801 525 ntBASIC2.52□□□□□ -2.01
TREX1Q9NSU2 AP002826.1-201ENST00000608835 315 ntBASIC2.52□□□□□ -2.01
TREX1Q9NSU2 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC2.52□□□□□ -2.01
TREX1Q9NSU2 AC006386.2-201ENST00000624491 75 ntBASIC2.52□□□□□ -2.01
TREX1Q9NSU2 AC012005.1-201ENST00000624575 75 ntBASIC2.52□□□□□ -2.01
TREX1Q9NSU2 AC009487.2-201ENST00000420969 6821 ntBASIC2.52□□□□□ -2.01
TREX1Q9NSU2 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
TREX1Q9NSU2 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
TREX1Q9NSU2 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.51□□□□□ -2.01
TREX1Q9NSU2 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
TREX1Q9NSU2 DEFA7P-201ENST00000382676 285 ntBASIC2.51□□□□□ -2.01
TREX1Q9NSU2 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
TREX1Q9NSU2 RNU2-72P-201ENST00000411175 163 ntBASIC2.51□□□□□ -2.01
TREX1Q9NSU2 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC2.51□□□□□ -2.01
TREX1Q9NSU2 AL096701.2-201ENST00000416920 238 ntBASIC2.51□□□□□ -2.01
TREX1Q9NSU2 AL356320.2-201ENST00000417263 507 ntBASIC2.51□□□□□ -2.01
TREX1Q9NSU2 RPL27AP8-201ENST00000424277 446 ntBASIC2.51□□□□□ -2.01
TREX1Q9NSU2 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC2.51□□□□□ -2.01
TREX1Q9NSU2 PSMA6P3-201ENST00000428242 164 ntBASIC2.51□□□□□ -2.01
TREX1Q9NSU2 ARL5AP4-201ENST00000430731 512 ntBASIC2.51□□□□□ -2.01
TREX1Q9NSU2 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC2.51□□□□□ -2.01
TREX1Q9NSU2 VN1R10P-201ENST00000447106 875 ntBASIC2.51□□□□□ -2.01
TREX1Q9NSU2 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC2.51□□□□□ -2.01
TREX1Q9NSU2 AC009961.3-201ENST00000449832 765 ntBASIC2.51□□□□□ -2.01
TREX1Q9NSU2 AC010099.1-201ENST00000455434 375 ntBASIC2.51□□□□□ -2.01
TREX1Q9NSU2 AC092757.1-201ENST00000467293 467 ntBASIC2.51□□□□□ -2.01
TREX1Q9NSU2 AP000852.1-201ENST00000472460 573 ntBASIC2.51□□□□□ -2.01
TREX1Q9NSU2 AC096576.1-201ENST00000489014 359 ntBASIC2.51□□□□□ -2.01
TREX1Q9NSU2 VN1R104P-201ENST00000505115 1009 ntBASIC2.51□□□□□ -2.01
TREX1Q9NSU2 BOLA3P3-201ENST00000505182 232 ntBASIC2.51□□□□□ -2.01
TREX1Q9NSU2 AP003168.1-201ENST00000530091 307 ntBASIC2.51□□□□□ -2.01
TREX1Q9NSU2 OR5BN1P-201ENST00000532955 829 ntBASIC2.51□□□□□ -2.01
TREX1Q9NSU2 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.51□□□□□ -2.01
TREX1Q9NSU2 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC2.51□□□□□ -2.01
TREX1Q9NSU2 AC122134.1-202ENST00000569111 1201 ntBASIC2.51□□□□□ -2.01
TREX1Q9NSU2 LARP7P2-201ENST00000575306 125 ntBASIC2.51□□□□□ -2.01
TREX1Q9NSU2 MIR4319-201ENST00000577285 85 ntBASIC2.51□□□□□ -2.01
TREX1Q9NSU2 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC2.51□□□□□ -2.01
TREX1Q9NSU2 AL356575.1-201ENST00000603008 283 ntBASIC2.51□□□□□ -2.01
TREX1Q9NSU2 AC245517.5-201ENST00000611529 162 ntBASIC2.51□□□□□ -2.01
TREX1Q9NSU2 SNHG22-203ENST00000617833 660 ntBASIC2.51□□□□□ -2.01
TREX1Q9NSU2 AC093875.1-201ENST00000623688 504 ntBASIC2.51□□□□□ -2.01
TREX1Q9NSU2 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC2.51□□□□□ -2.01
TREX1Q9NSU2 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC2.51□□□□□ -2.01
TREX1Q9NSU2 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.51□□□□□ -2.01
TREX1Q9NSU2 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.51□□□□□ -2.01
TREX1Q9NSU2 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
TREX1Q9NSU2 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.5□□□□□ -2.01
TREX1Q9NSU2 AC135776.4-201ENST00000624300 1904 ntBASIC2.5□□□□□ -2.01
TREX1Q9NSU2 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.5□□□□□ -2.01
TREX1Q9NSU2 AC008669.1-201ENST00000565823 2178 ntBASIC2.5□□□□□ -2.01
TREX1Q9NSU2 SUCLA2P2-201ENST00000417269 1309 ntBASIC2.5□□□□□ -2.01
TREX1Q9NSU2 MIR6073-201ENST00000352083 89 ntBASIC2.5□□□□□ -2.01
TREX1Q9NSU2 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
TREX1Q9NSU2 RNU6-878P-201ENST00000384578 110 ntBASIC2.5□□□□□ -2.01
TREX1Q9NSU2 MIR27B-201ENST00000385129 97 ntBASIC2.5□□□□□ -2.01
TREX1Q9NSU2 RNA5SP354-201ENST00000391247 136 ntBASIC2.5□□□□□ -2.01
TREX1Q9NSU2 RNU2-47P-201ENST00000410649 186 ntBASIC2.5□□□□□ -2.01
TREX1Q9NSU2 RNU6-193P-201ENST00000410977 107 ntBASIC2.5□□□□□ -2.01
TREX1Q9NSU2 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.5□□□□□ -2.01
TREX1Q9NSU2 RPL7P37-201ENST00000425095 738 ntBASIC2.5□□□□□ -2.01
TREX1Q9NSU2 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC2.5□□□□□ -2.01
TREX1Q9NSU2 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC2.5□□□□□ -2.01
TREX1Q9NSU2 AC108938.1-201ENST00000451204 136 ntBASIC2.5□□□□□ -2.01
TREX1Q9NSU2 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC2.5□□□□□ -2.01
TREX1Q9NSU2 MRPL42P4-201ENST00000453267 443 ntBASIC2.5□□□□□ -2.01
TREX1Q9NSU2 AC008571.1-201ENST00000467232 300 ntBASIC2.5□□□□□ -2.01
TREX1Q9NSU2 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.5□□□□□ -2.01
TREX1Q9NSU2 OR4G11P-201ENST00000492842 939 ntBASIC2.5□□□□□ -2.01
TREX1Q9NSU2 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC2.5□□□□□ -2.01
TREX1Q9NSU2 AC008716.1-201ENST00000511084 513 ntBASIC2.5□□□□□ -2.01
TREX1Q9NSU2 OR5BM1P-201ENST00000512021 366 ntBASIC2.5□□□□□ -2.01
TREX1Q9NSU2 RNA5SP356-201ENST00000515972 94 ntBASIC2.5□□□□□ -2.01
TREX1Q9NSU2 RNU5A-7P-201ENST00000515979 116 ntBASIC2.5□□□□□ -2.01
TREX1Q9NSU2 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC2.5□□□□□ -2.01
TREX1Q9NSU2 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 139.1 ms