Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 MIR493-201ENST00000385254 89 ntBASIC2.18□□□□□ -2.06
CISHQ9NSE2 MTND4LP20-201ENST00000402379 270 ntBASIC2.18□□□□□ -2.06
CISHQ9NSE2 RNU6-712P-201ENST00000410558 100 ntBASIC2.18□□□□□ -2.06
CISHQ9NSE2 RPS15AP38-201ENST00000413110 372 ntBASIC2.18□□□□□ -2.06
CISHQ9NSE2 AC027124.2-201ENST00000428249 105 ntBASIC2.18□□□□□ -2.06
CISHQ9NSE2 AL445646.1-201ENST00000431784 216 ntBASIC2.18□□□□□ -2.06
CISHQ9NSE2 AC010881.1-201ENST00000433830 235 ntBASIC2.18□□□□□ -2.06
CISHQ9NSE2 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC2.18□□□□□ -2.06
CISHQ9NSE2 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC2.18□□□□□ -2.06
CISHQ9NSE2 USP9YP8-201ENST00000441913 500 ntBASIC2.18□□□□□ -2.06
CISHQ9NSE2 RPL32P28-201ENST00000443577 397 ntBASIC2.18□□□□□ -2.06
CISHQ9NSE2 MTND1P33-201ENST00000446251 917 ntBASIC2.18□□□□□ -2.06
CISHQ9NSE2 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC2.18□□□□□ -2.06
CISHQ9NSE2 AL021397.1-201ENST00000451806 248 ntBASIC2.18□□□□□ -2.06
CISHQ9NSE2 AC010099.1-201ENST00000455434 375 ntBASIC2.18□□□□□ -2.06
CISHQ9NSE2 RPS29P21-201ENST00000496272 170 ntBASIC2.18□□□□□ -2.06
CISHQ9NSE2 NAMPTP2-201ENST00000505629 1115 ntBASIC2.18□□□□□ -2.06
CISHQ9NSE2 RNU1-41P-201ENST00000516161 162 ntBASIC2.18□□□□□ -2.06
CISHQ9NSE2 RNU1-48P-201ENST00000516400 162 ntBASIC2.18□□□□□ -2.06
CISHQ9NSE2 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
CISHQ9NSE2 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
CISHQ9NSE2 AC126177.3-201ENST00000551839 688 ntBASIC2.18□□□□□ -2.06
CISHQ9NSE2 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC2.18□□□□□ -2.06
CISHQ9NSE2 AC103710.1-201ENST00000610003 901 ntBASIC2.18□□□□□ -2.06
CISHQ9NSE2 AC013412.1-201ENST00000610687 192 ntBASIC2.18□□□□□ -2.06
CISHQ9NSE2 Y_RNA.783-201ENST00000613546 102 ntBASIC2.18□□□□□ -2.06
CISHQ9NSE2 AP003400.6-201ENST00000624698 740 ntBASIC2.18□□□□□ -2.06
CISHQ9NSE2 MTND2P41-201ENST00000637599 773 ntBASIC2.18□□□□□ -2.06
CISHQ9NSE2 MTCO1P6-201ENST00000481192 1384 ntBASIC2.18□□□□□ -2.06
CISHQ9NSE2 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.17□□□□□ -2.06
CISHQ9NSE2 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
CISHQ9NSE2 RNU6-40P-201ENST00000384254 107 ntBASIC2.17□□□□□ -2.06
CISHQ9NSE2 RNU6-441P-201ENST00000384545 106 ntBASIC2.17□□□□□ -2.06
CISHQ9NSE2 CYCSP45-201ENST00000402289 315 ntBASIC2.17□□□□□ -2.06
CISHQ9NSE2 ATP5F1P6-201ENST00000402768 767 ntBASIC2.17□□□□□ -2.06
CISHQ9NSE2 RNU2-2P-201ENST00000410396 191 ntBASIC2.17□□□□□ -2.06
CISHQ9NSE2 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC2.17□□□□□ -2.06
CISHQ9NSE2 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.17□□□□□ -2.06
CISHQ9NSE2 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC2.17□□□□□ -2.06
CISHQ9NSE2 AL590762.3-201ENST00000436372 640 ntBASIC2.17□□□□□ -2.06
CISHQ9NSE2 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.17□□□□□ -2.06
CISHQ9NSE2 RPL23AP7-203ENST00000449021 469 ntBASIC2.17□□□□□ -2.06
CISHQ9NSE2 AC025033.1-201ENST00000463883 194 ntBASIC2.17□□□□□ -2.06
CISHQ9NSE2 RPL30P9-201ENST00000465586 330 ntBASIC2.17□□□□□ -2.06
CISHQ9NSE2 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC2.17□□□□□ -2.06
CISHQ9NSE2 RPL23AP70-201ENST00000483361 460 ntBASIC2.17□□□□□ -2.06
CISHQ9NSE2 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC2.17□□□□□ -2.06
CISHQ9NSE2 MLLT10P2-201ENST00000506434 249 ntBASIC2.17□□□□□ -2.06
CISHQ9NSE2 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC2.17□□□□□ -2.06
CISHQ9NSE2 OR8K4P-201ENST00000534608 872 ntBASIC2.17□□□□□ -2.06
CISHQ9NSE2 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC2.17□□□□□ -2.06
CISHQ9NSE2 U2.15-201ENST00000611544 191 ntBASIC2.17□□□□□ -2.06
CISHQ9NSE2 U2.16-201ENST00000613119 191 ntBASIC2.17□□□□□ -2.06
CISHQ9NSE2 U2.12-201ENST00000613778 191 ntBASIC2.17□□□□□ -2.06
CISHQ9NSE2 U2.20-201ENST00000613956 192 ntBASIC2.17□□□□□ -2.06
CISHQ9NSE2 U2.9-201ENST00000615427 191 ntBASIC2.17□□□□□ -2.06
CISHQ9NSE2 U2.11-201ENST00000616345 191 ntBASIC2.17□□□□□ -2.06
CISHQ9NSE2 U2.2-201ENST00000616535 191 ntBASIC2.17□□□□□ -2.06
CISHQ9NSE2 U2.3-201ENST00000617785 191 ntBASIC2.17□□□□□ -2.06
CISHQ9NSE2 U2.19-201ENST00000618602 191 ntBASIC2.17□□□□□ -2.06
CISHQ9NSE2 RNU2-1-201ENST00000618664 191 ntBASIC2.17□□□□□ -2.06
CISHQ9NSE2 U2.6-201ENST00000619225 191 ntBASIC2.17□□□□□ -2.06
CISHQ9NSE2 U2.5-201ENST00000619465 191 ntBASIC2.17□□□□□ -2.06
CISHQ9NSE2 U2.10-201ENST00000620268 191 ntBASIC2.17□□□□□ -2.06
CISHQ9NSE2 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.17□□□□□ -2.06
CISHQ9NSE2 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
CISHQ9NSE2 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
CISHQ9NSE2 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
CISHQ9NSE2 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
CISHQ9NSE2 RNU6-1074P-201ENST00000383995 104 ntBASIC2.16□□□□□ -2.06
CISHQ9NSE2 CASP3-203ENST00000393588 677 ntTSL 4 BASIC2.16□□□□□ -2.06
CISHQ9NSE2 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
CISHQ9NSE2 HMGB3P31-201ENST00000413333 595 ntBASIC2.16□□□□□ -2.06
CISHQ9NSE2 TMEM167AP1-201ENST00000423409 219 ntBASIC2.16□□□□□ -2.06
CISHQ9NSE2 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.16□□□□□ -2.06
CISHQ9NSE2 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC2.16□□□□□ -2.06
CISHQ9NSE2 RAB11AP1-201ENST00000442978 646 ntBASIC2.16□□□□□ -2.06
CISHQ9NSE2 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.16□□□□□ -2.06
CISHQ9NSE2 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC2.16□□□□□ -2.06
CISHQ9NSE2 HMGN3P1-201ENST00000453847 193 ntBASIC2.16□□□□□ -2.06
CISHQ9NSE2 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC2.16□□□□□ -2.06
CISHQ9NSE2 RPS27P23-201ENST00000487608 251 ntBASIC2.16□□□□□ -2.06
CISHQ9NSE2 AC106872.3-201ENST00000495104 446 ntBASIC2.16□□□□□ -2.06
CISHQ9NSE2 GTF2IP9-201ENST00000502460 301 ntBASIC2.16□□□□□ -2.06
CISHQ9NSE2 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
CISHQ9NSE2 RPL37P25-201ENST00000507308 276 ntBASIC2.16□□□□□ -2.06
CISHQ9NSE2 CBX3P3-201ENST00000508108 532 ntBASIC2.16□□□□□ -2.06
CISHQ9NSE2 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC2.16□□□□□ -2.06
CISHQ9NSE2 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.16□□□□□ -2.06
CISHQ9NSE2 AC087272.1-201ENST00000523624 533 ntBASIC2.16□□□□□ -2.06
CISHQ9NSE2 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
CISHQ9NSE2 AKIRIN1P1-201ENST00000547384 544 ntBASIC2.16□□□□□ -2.06
CISHQ9NSE2 OR4K7P-201ENST00000580232 945 ntBASIC2.16□□□□□ -2.06
CISHQ9NSE2 AC012254.4-201ENST00000588843 273 ntBASIC2.16□□□□□ -2.06
CISHQ9NSE2 AC009314.1-201ENST00000603871 304 ntBASIC2.16□□□□□ -2.06
CISHQ9NSE2 AC106028.5-201ENST00000610332 395 ntBASIC2.16□□□□□ -2.06
CISHQ9NSE2 AC034102.8-201ENST00000615146 484 ntBASIC2.16□□□□□ -2.06
CISHQ9NSE2 AC068880.5-201ENST00000624331 290 ntBASIC2.16□□□□□ -2.06
CISHQ9NSE2 AC010680.1-201ENST00000590024 3590 ntBASIC2.16□□□□□ -2.06
CISHQ9NSE2 AC104454.1-201ENST00000421341 1401 ntBASIC2.16□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms