Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 UQCRFS1P3-201ENST00000407697 385 ntBASIC2.95□□□□□ -1.94
TM9SF3Q9HD45 RNA5SP80-201ENST00000410475 111 ntBASIC2.95□□□□□ -1.94
TM9SF3Q9HD45 RNU2-25P-201ENST00000411041 191 ntBASIC2.95□□□□□ -1.94
TM9SF3Q9HD45 RPL19P1-201ENST00000411635 428 ntBASIC2.95□□□□□ -1.94
TM9SF3Q9HD45 BX682237.1-201ENST00000415016 335 ntBASIC2.95□□□□□ -1.94
TM9SF3Q9HD45 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC2.95□□□□□ -1.94
TM9SF3Q9HD45 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC2.95□□□□□ -1.94
TM9SF3Q9HD45 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
TM9SF3Q9HD45 RPS24P13-201ENST00000442520 397 ntBASIC2.95□□□□□ -1.94
TM9SF3Q9HD45 COX6CP18-201ENST00000448769 222 ntBASIC2.95□□□□□ -1.94
TM9SF3Q9HD45 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC2.95□□□□□ -1.94
TM9SF3Q9HD45 PRELID3BP6-201ENST00000503839 571 ntBASIC2.95□□□□□ -1.94
TM9SF3Q9HD45 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC2.95□□□□□ -1.94
TM9SF3Q9HD45 AC112206.4-201ENST00000515142 405 ntBASIC2.95□□□□□ -1.94
TM9SF3Q9HD45 RN7SKP132-201ENST00000516001 208 ntBASIC2.95□□□□□ -1.94
TM9SF3Q9HD45 RNU6-798P-201ENST00000516912 103 ntBASIC2.95□□□□□ -1.94
TM9SF3Q9HD45 COX6CP8-201ENST00000522620 226 ntBASIC2.95□□□□□ -1.94
TM9SF3Q9HD45 OR5G4P-201ENST00000525251 760 ntBASIC2.95□□□□□ -1.94
TM9SF3Q9HD45 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC2.95□□□□□ -1.94
TM9SF3Q9HD45 CD69-203ENST00000536709 1020 ntTSL 2 BASIC2.95□□□□□ -1.94
TM9SF3Q9HD45 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC2.95□□□□□ -1.94
TM9SF3Q9HD45 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC2.95□□□□□ -1.94
TM9SF3Q9HD45 AC122134.1-202ENST00000569111 1201 ntBASIC2.95□□□□□ -1.94
TM9SF3Q9HD45 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC2.95□□□□□ -1.94
TM9SF3Q9HD45 ANKRD36BP2-206ENST00000575193 1245 ntBASIC2.95□□□□□ -1.94
TM9SF3Q9HD45 AC090330.1-201ENST00000588646 764 ntBASIC2.95□□□□□ -1.94
TM9SF3Q9HD45 DUXAP11-201ENST00000603858 526 ntBASIC2.95□□□□□ -1.94
TM9SF3Q9HD45 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.95□□□□□ -1.94
TM9SF3Q9HD45 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC2.95□□□□□ -1.94
TM9SF3Q9HD45 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.95□□□□□ -1.94
TM9SF3Q9HD45 AC010680.1-201ENST00000590024 3590 ntBASIC2.95□□□□□ -1.94
TM9SF3Q9HD45 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC2.95□□□□□ -1.94
TM9SF3Q9HD45 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
TM9SF3Q9HD45 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
TM9SF3Q9HD45 AC004944.1-201ENST00000517807 3059 ntBASIC2.94□□□□□ -1.94
TM9SF3Q9HD45 RNU6-851P-201ENST00000384565 107 ntBASIC2.94□□□□□ -1.94
TM9SF3Q9HD45 BTF3P8-201ENST00000414577 526 ntBASIC2.94□□□□□ -1.94
TM9SF3Q9HD45 CCDC58P2-201ENST00000417131 366 ntBASIC2.94□□□□□ -1.94
TM9SF3Q9HD45 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC2.94□□□□□ -1.94
TM9SF3Q9HD45 THAP5P1-201ENST00000439089 262 ntBASIC2.94□□□□□ -1.94
TM9SF3Q9HD45 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.94□□□□□ -1.94
TM9SF3Q9HD45 AC009237.8-201ENST00000445492 379 ntBASIC2.94□□□□□ -1.94
TM9SF3Q9HD45 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC2.94□□□□□ -1.94
TM9SF3Q9HD45 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC2.94□□□□□ -1.94
TM9SF3Q9HD45 AC244505.3-201ENST00000454598 187 ntBASIC2.94□□□□□ -1.94
TM9SF3Q9HD45 OR6K1P-201ENST00000456766 971 ntBASIC2.94□□□□□ -1.94
TM9SF3Q9HD45 RPL31P50-201ENST00000471002 296 ntBASIC2.94□□□□□ -1.94
TM9SF3Q9HD45 RN7SL429P-201ENST00000479090 223 ntBASIC2.94□□□□□ -1.94
TM9SF3Q9HD45 RN7SL499P-201ENST00000481141 276 ntBASIC2.94□□□□□ -1.94
TM9SF3Q9HD45 RN7SL489P-201ENST00000486185 223 ntBASIC2.94□□□□□ -1.94
TM9SF3Q9HD45 RN7SL327P-201ENST00000488659 223 ntBASIC2.94□□□□□ -1.94
TM9SF3Q9HD45 AC147055.4-201ENST00000504399 745 ntBASIC2.94□□□□□ -1.94
TM9SF3Q9HD45 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC2.94□□□□□ -1.94
TM9SF3Q9HD45 HIGD1AP13-201ENST00000509878 289 ntBASIC2.94□□□□□ -1.94
TM9SF3Q9HD45 snoZ278.1-201ENST00000517059 112 ntBASIC2.94□□□□□ -1.94
TM9SF3Q9HD45 AC104986.1-201ENST00000517978 436 ntBASIC2.94□□□□□ -1.94
TM9SF3Q9HD45 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC2.94□□□□□ -1.94
TM9SF3Q9HD45 HMGB1P6-201ENST00000569046 646 ntBASIC2.94□□□□□ -1.94
TM9SF3Q9HD45 LARP7P2-201ENST00000575306 125 ntBASIC2.94□□□□□ -1.94
TM9SF3Q9HD45 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
TM9SF3Q9HD45 VN1R90P-201ENST00000595717 726 ntBASIC2.94□□□□□ -1.94
TM9SF3Q9HD45 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC2.94□□□□□ -1.94
TM9SF3Q9HD45 AC008759.3-201ENST00000613300 508 ntBASIC2.94□□□□□ -1.94
TM9SF3Q9HD45 RN7SL853P-201ENST00000617250 223 ntBASIC2.94□□□□□ -1.94
TM9SF3Q9HD45 AC103798.2-201ENST00000624292 632 ntBASIC2.94□□□□□ -1.94
TM9SF3Q9HD45 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
TM9SF3Q9HD45 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
TM9SF3Q9HD45 RNU5A-1-201ENST00000362698 116 ntBASIC2.93□□□□□ -1.94
TM9SF3Q9HD45 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC2.93□□□□□ -1.94
TM9SF3Q9HD45 SNORA18.3-201ENST00000384122 132 ntBASIC2.93□□□□□ -1.94
TM9SF3Q9HD45 RNU6-301P-201ENST00000384277 107 ntBASIC2.93□□□□□ -1.94
TM9SF3Q9HD45 MIR627-201ENST00000384979 97 ntBASIC2.93□□□□□ -1.94
TM9SF3Q9HD45 AL355143.1-201ENST00000407101 841 ntBASIC2.93□□□□□ -1.94
TM9SF3Q9HD45 AC027644.1-201ENST00000419595 298 ntBASIC2.93□□□□□ -1.94
TM9SF3Q9HD45 C1DP1-201ENST00000426049 402 ntBASIC2.93□□□□□ -1.94
TM9SF3Q9HD45 AL390023.1-201ENST00000428836 262 ntBASIC2.93□□□□□ -1.94
TM9SF3Q9HD45 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC2.93□□□□□ -1.94
TM9SF3Q9HD45 MRPL42P4-201ENST00000453267 443 ntBASIC2.93□□□□□ -1.94
TM9SF3Q9HD45 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.93□□□□□ -1.94
TM9SF3Q9HD45 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.93□□□□□ -1.94
TM9SF3Q9HD45 SUMO2P5-201ENST00000506790 245 ntBASIC2.93□□□□□ -1.94
TM9SF3Q9HD45 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
TM9SF3Q9HD45 OR5BM1P-201ENST00000512021 366 ntBASIC2.93□□□□□ -1.94
TM9SF3Q9HD45 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC2.93□□□□□ -1.94
TM9SF3Q9HD45 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.93□□□□□ -1.94
TM9SF3Q9HD45 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC2.93□□□□□ -1.94
TM9SF3Q9HD45 AC107016.2-201ENST00000547968 190 ntBASIC2.93□□□□□ -1.94
TM9SF3Q9HD45 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.93□□□□□ -1.94
TM9SF3Q9HD45 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.93□□□□□ -1.94
TM9SF3Q9HD45 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC2.93□□□□□ -1.94
TM9SF3Q9HD45 MIR4319-201ENST00000577285 85 ntBASIC2.93□□□□□ -1.94
TM9SF3Q9HD45 OR4K8P-201ENST00000578842 1048 ntBASIC2.93□□□□□ -1.94
TM9SF3Q9HD45 AC012119.1-201ENST00000603184 222 ntBASIC2.93□□□□□ -1.94
TM9SF3Q9HD45 ATP1B3P1-201ENST00000605365 821 ntBASIC2.93□□□□□ -1.94
TM9SF3Q9HD45 AP001521.1-201ENST00000609150 300 ntBASIC2.93□□□□□ -1.94
TM9SF3Q9HD45 AC004009.2-201ENST00000623016 728 ntBASIC2.93□□□□□ -1.94
TM9SF3Q9HD45 AC073308.1-201ENST00000623696 305 ntBASIC2.93□□□□□ -1.94
TM9SF3Q9HD45 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC2.93□□□□□ -1.94
TM9SF3Q9HD45 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.93□□□□□ -1.94
TM9SF3Q9HD45 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 143.2 ms