Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 SNORD109B-201ENST00000458961 67 ntBASIC3.18□□□□□ -1.9
RNF41Q9H4P4 SNORD109A-201ENST00000459128 67 ntBASIC3.18□□□□□ -1.9
RNF41Q9H4P4 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC3.18□□□□□ -1.9
RNF41Q9H4P4 AL049873.1-201ENST00000480540 376 ntBASIC3.18□□□□□ -1.9
RNF41Q9H4P4 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC3.18□□□□□ -1.9
RNF41Q9H4P4 TMEM251P1-201ENST00000503717 318 ntBASIC3.18□□□□□ -1.9
RNF41Q9H4P4 HMGB1P22-201ENST00000505315 124 ntBASIC3.18□□□□□ -1.9
RNF41Q9H4P4 AC109445.1-201ENST00000512356 383 ntBASIC3.18□□□□□ -1.9
RNF41Q9H4P4 RNU5A-4P-201ENST00000516588 111 ntBASIC3.18□□□□□ -1.9
RNF41Q9H4P4 EEF1A1P37-201ENST00000522748 715 ntBASIC3.18□□□□□ -1.9
RNF41Q9H4P4 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
RNF41Q9H4P4 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC3.18□□□□□ -1.9
RNF41Q9H4P4 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC3.18□□□□□ -1.9
RNF41Q9H4P4 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC3.18□□□□□ -1.9
RNF41Q9H4P4 MTATP6P24-201ENST00000576835 677 ntBASIC3.18□□□□□ -1.9
RNF41Q9H4P4 BNIP3P24-201ENST00000593398 557 ntBASIC3.18□□□□□ -1.9
RNF41Q9H4P4 VN1R90P-201ENST00000595717 726 ntBASIC3.18□□□□□ -1.9
RNF41Q9H4P4 AC234772.3-201ENST00000602277 528 ntBASIC3.18□□□□□ -1.9
RNF41Q9H4P4 AL355812.1-201ENST00000603215 216 ntBASIC3.18□□□□□ -1.9
RNF41Q9H4P4 AC025588.2-201ENST00000604851 466 ntBASIC3.18□□□□□ -1.9
RNF41Q9H4P4 AL355816.2-201ENST00000610049 647 ntBASIC3.18□□□□□ -1.9
RNF41Q9H4P4 AC097478.2-201ENST00000610572 514 ntBASIC3.18□□□□□ -1.9
RNF41Q9H4P4 CR381653.2-201ENST00000624041 768 ntBASIC3.18□□□□□ -1.9
RNF41Q9H4P4 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC3.18□□□□□ -1.9
RNF41Q9H4P4 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.18□□□□□ -1.9
RNF41Q9H4P4 PAPPA-AS1-201ENST00000445861 2450 ntBASIC3.17□□□□□ -1.9
RNF41Q9H4P4 MIR181B1-201ENST00000385240 110 ntBASIC3.17□□□□□ -1.9
RNF41Q9H4P4 MIR607-201ENST00000385241 96 ntBASIC3.17□□□□□ -1.9
RNF41Q9H4P4 DHFRP6-201ENST00000401776 268 ntBASIC3.17□□□□□ -1.9
RNF41Q9H4P4 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
RNF41Q9H4P4 AL008987.1-201ENST00000415528 237 ntBASIC3.17□□□□□ -1.9
RNF41Q9H4P4 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC3.17□□□□□ -1.9
RNF41Q9H4P4 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC3.17□□□□□ -1.9
RNF41Q9H4P4 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC3.17□□□□□ -1.9
RNF41Q9H4P4 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC3.17□□□□□ -1.9
RNF41Q9H4P4 OFD1P12Y-201ENST00000427963 1207 ntBASIC3.17□□□□□ -1.9
RNF41Q9H4P4 EZH2P1-201ENST00000431167 291 ntBASIC3.17□□□□□ -1.9
RNF41Q9H4P4 OFD1P13Y-201ENST00000431179 1232 ntBASIC3.17□□□□□ -1.9
RNF41Q9H4P4 MTND1P32-201ENST00000433043 938 ntBASIC3.17□□□□□ -1.9
RNF41Q9H4P4 AL662791.1-201ENST00000441992 928 ntBASIC3.17□□□□□ -1.9
RNF41Q9H4P4 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC3.17□□□□□ -1.9
RNF41Q9H4P4 RPL23AP31-201ENST00000456160 467 ntBASIC3.17□□□□□ -1.9
RNF41Q9H4P4 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.17□□□□□ -1.9
RNF41Q9H4P4 AC026410.2-201ENST00000460281 156 ntBASIC3.17□□□□□ -1.9
RNF41Q9H4P4 AC004924.1-201ENST00000480160 781 ntBASIC3.17□□□□□ -1.9
RNF41Q9H4P4 RPL31P13-201ENST00000484151 370 ntBASIC3.17□□□□□ -1.9
RNF41Q9H4P4 AC006445.2-201ENST00000510061 472 ntBASIC3.17□□□□□ -1.9
RNF41Q9H4P4 AC112673.1-201ENST00000513168 575 ntBASIC3.17□□□□□ -1.9
RNF41Q9H4P4 HSPA8P13-201ENST00000523715 472 ntBASIC3.17□□□□□ -1.9
RNF41Q9H4P4 AL133271.1-201ENST00000538229 291 ntBASIC3.17□□□□□ -1.9
RNF41Q9H4P4 AC010198.2-201ENST00000550612 259 ntBASIC3.17□□□□□ -1.9
RNF41Q9H4P4 AL355836.1-201ENST00000555951 870 ntBASIC3.17□□□□□ -1.9
RNF41Q9H4P4 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC3.17□□□□□ -1.9
RNF41Q9H4P4 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.17□□□□□ -1.9
RNF41Q9H4P4 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.17□□□□□ -1.9
RNF41Q9H4P4 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC3.17□□□□□ -1.9
RNF41Q9H4P4 RPL23AP92-201ENST00000603609 255 ntBASIC3.17□□□□□ -1.9
RNF41Q9H4P4 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.17□□□□□ -1.9
RNF41Q9H4P4 AC243773.3-201ENST00000613270 256 ntBASIC3.17□□□□□ -1.9
RNF41Q9H4P4 AP000484.1-201ENST00000620067 1252 ntBASIC3.17□□□□□ -1.9
RNF41Q9H4P4 AC040168.1-201ENST00000623594 991 ntBASIC3.17□□□□□ -1.9
RNF41Q9H4P4 AC091925.2-201ENST00000625059 256 ntBASIC3.17□□□□□ -1.9
RNF41Q9H4P4 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC3.17□□□□□ -1.9
RNF41Q9H4P4 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.17□□□□□ -1.9
RNF41Q9H4P4 AP002907.1-201ENST00000606361 1430 ntBASIC3.17□□□□□ -1.9
RNF41Q9H4P4 AC110774.1-201ENST00000623567 2018 ntBASIC3.17□□□□□ -1.9
RNF41Q9H4P4 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
RNF41Q9H4P4 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.16□□□□□ -1.9
RNF41Q9H4P4 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.16□□□□□ -1.9
RNF41Q9H4P4 RNA5SP258-201ENST00000362750 119 ntBASIC3.16□□□□□ -1.9
RNF41Q9H4P4 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
RNF41Q9H4P4 RPL23AP29-201ENST00000397284 453 ntBASIC3.16□□□□□ -1.9
RNF41Q9H4P4 HMGB1P17-201ENST00000403495 628 ntBASIC3.16□□□□□ -1.9
RNF41Q9H4P4 AL590004.2-201ENST00000404787 371 ntBASIC3.16□□□□□ -1.9
RNF41Q9H4P4 RNA5SP129-201ENST00000410276 118 ntBASIC3.16□□□□□ -1.9
RNF41Q9H4P4 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.16□□□□□ -1.9
RNF41Q9H4P4 AL139421.1-201ENST00000423010 169 ntBASIC3.16□□□□□ -1.9
RNF41Q9H4P4 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC3.16□□□□□ -1.9
RNF41Q9H4P4 PSMA6P3-201ENST00000428242 164 ntBASIC3.16□□□□□ -1.9
RNF41Q9H4P4 RPL21P112-201ENST00000434403 463 ntBASIC3.16□□□□□ -1.9
RNF41Q9H4P4 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC3.16□□□□□ -1.9
RNF41Q9H4P4 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC3.16□□□□□ -1.9
RNF41Q9H4P4 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC3.16□□□□□ -1.9
RNF41Q9H4P4 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC3.16□□□□□ -1.9
RNF41Q9H4P4 AC090453.1-201ENST00000495560 436 ntBASIC3.16□□□□□ -1.9
RNF41Q9H4P4 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC3.16□□□□□ -1.9
RNF41Q9H4P4 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC3.16□□□□□ -1.9
RNF41Q9H4P4 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC3.16□□□□□ -1.9
RNF41Q9H4P4 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC3.16□□□□□ -1.9
RNF41Q9H4P4 AL158211.1-201ENST00000566763 763 ntBASIC3.16□□□□□ -1.9
RNF41Q9H4P4 MIR4319-201ENST00000577285 85 ntBASIC3.16□□□□□ -1.9
RNF41Q9H4P4 MIR4506-201ENST00000584693 77 ntBASIC3.16□□□□□ -1.9
RNF41Q9H4P4 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC3.16□□□□□ -1.9
RNF41Q9H4P4 OR2AS2P-201ENST00000606902 342 ntBASIC3.16□□□□□ -1.9
RNF41Q9H4P4 AC006329.2-201ENST00000611491 394 ntBASIC3.16□□□□□ -1.9
RNF41Q9H4P4 AC025588.4-201ENST00000615802 908 ntBASIC3.16□□□□□ -1.9
RNF41Q9H4P4 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
RNF41Q9H4P4 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
RNF41Q9H4P4 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
RNF41Q9H4P4 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms