Protein–RNA interactions for Protein: Q9GZZ0

HOXD1, Homeobox protein Hox-D1, humanhuman

Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD1Q9GZZ0 MIR548AB-201ENST00000584917 84 ntBASIC3.17□□□□□ -1.9
HOXD1Q9GZZ0 AL353997.4-201ENST00000586196 166 ntBASIC3.17□□□□□ -1.9
HOXD1Q9GZZ0 XIAPP1-201ENST00000603162 600 ntBASIC3.17□□□□□ -1.9
HOXD1Q9GZZ0 AP000403.1-201ENST00000603349 851 ntBASIC3.17□□□□□ -1.9
HOXD1Q9GZZ0 AC011468.4-201ENST00000603942 409 ntBASIC3.17□□□□□ -1.9
HOXD1Q9GZZ0 PRELID3BP8-201ENST00000604148 295 ntBASIC3.17□□□□□ -1.9
HOXD1Q9GZZ0 AC239868.4-201ENST00000608318 671 ntBASIC3.17□□□□□ -1.9
HOXD1Q9GZZ0 AC009090.3-201ENST00000616553 565 ntBASIC3.17□□□□□ -1.9
HOXD1Q9GZZ0 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
HOXD1Q9GZZ0 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC3.17□□□□□ -1.9
HOXD1Q9GZZ0 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.17□□□□□ -1.9
HOXD1Q9GZZ0 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
HOXD1Q9GZZ0 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
HOXD1Q9GZZ0 AL353746.1-201ENST00000566293 6881 ntBASIC3.17□□□□□ -1.9
HOXD1Q9GZZ0 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
HOXD1Q9GZZ0 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.16□□□□□ -1.9
HOXD1Q9GZZ0 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
HOXD1Q9GZZ0 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
HOXD1Q9GZZ0 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.16□□□□□ -1.9
HOXD1Q9GZZ0 RNU6-837P-201ENST00000391056 108 ntBASIC3.16□□□□□ -1.9
HOXD1Q9GZZ0 RPS3AP26-201ENST00000398259 784 ntBASIC3.16□□□□□ -1.9
HOXD1Q9GZZ0 MIR1305-201ENST00000408300 86 ntBASIC3.16□□□□□ -1.9
HOXD1Q9GZZ0 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.16□□□□□ -1.9
HOXD1Q9GZZ0 RNU6-712P-201ENST00000410558 100 ntBASIC3.16□□□□□ -1.9
HOXD1Q9GZZ0 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC3.16□□□□□ -1.9
HOXD1Q9GZZ0 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC3.16□□□□□ -1.9
HOXD1Q9GZZ0 TOMM22P1-201ENST00000418578 312 ntBASIC3.16□□□□□ -1.9
HOXD1Q9GZZ0 AL389915.1-201ENST00000422463 466 ntBASIC3.16□□□□□ -1.9
HOXD1Q9GZZ0 RPS27AP14-201ENST00000422868 454 ntBASIC3.16□□□□□ -1.9
HOXD1Q9GZZ0 CYCSP46-201ENST00000423569 204 ntBASIC3.16□□□□□ -1.9
HOXD1Q9GZZ0 EZH2P1-201ENST00000431167 291 ntBASIC3.16□□□□□ -1.9
HOXD1Q9GZZ0 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
HOXD1Q9GZZ0 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC3.16□□□□□ -1.9
HOXD1Q9GZZ0 TAF9P1-201ENST00000445421 515 ntBASIC3.16□□□□□ -1.9
HOXD1Q9GZZ0 BMI1P1-201ENST00000445879 941 ntBASIC3.16□□□□□ -1.9
HOXD1Q9GZZ0 HMGN2P21-201ENST00000447764 270 ntBASIC3.16□□□□□ -1.9
HOXD1Q9GZZ0 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.16□□□□□ -1.9
HOXD1Q9GZZ0 TAF9P2-201ENST00000454958 515 ntBASIC3.16□□□□□ -1.9
HOXD1Q9GZZ0 snoU109.4-201ENST00000458953 143 ntBASIC3.16□□□□□ -1.9
HOXD1Q9GZZ0 AC021678.1-201ENST00000505195 936 ntBASIC3.16□□□□□ -1.9
HOXD1Q9GZZ0 AC022447.3-201ENST00000506865 495 ntBASIC3.16□□□□□ -1.9
HOXD1Q9GZZ0 AC002456.2-201ENST00000509356 380 ntBASIC3.16□□□□□ -1.9
HOXD1Q9GZZ0 AC091965.2-201ENST00000512324 613 ntBASIC3.16□□□□□ -1.9
HOXD1Q9GZZ0 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
HOXD1Q9GZZ0 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.16□□□□□ -1.9
HOXD1Q9GZZ0 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.16□□□□□ -1.9
HOXD1Q9GZZ0 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC3.16□□□□□ -1.9
HOXD1Q9GZZ0 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.16□□□□□ -1.9
HOXD1Q9GZZ0 AC091489.2-201ENST00000566263 604 ntBASIC3.16□□□□□ -1.9
HOXD1Q9GZZ0 AC012414.6-201ENST00000568241 401 ntBASIC3.16□□□□□ -1.9
HOXD1Q9GZZ0 AC034268.2-201ENST00000571784 482 ntBASIC3.16□□□□□ -1.9
HOXD1Q9GZZ0 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
HOXD1Q9GZZ0 AC055876.5-201ENST00000605667 259 ntBASIC3.16□□□□□ -1.9
HOXD1Q9GZZ0 AL158063.1-201ENST00000615349 536 ntBASIC3.16□□□□□ -1.9
HOXD1Q9GZZ0 AC027807.2-201ENST00000616099 408 ntBASIC3.16□□□□□ -1.9
HOXD1Q9GZZ0 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
HOXD1Q9GZZ0 AC039056.2-201ENST00000622261 511 ntBASIC3.16□□□□□ -1.9
HOXD1Q9GZZ0 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.16□□□□□ -1.9
HOXD1Q9GZZ0 AC012442.3-202ENST00000636742 206 ntBASIC3.16□□□□□ -1.9
HOXD1Q9GZZ0 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
HOXD1Q9GZZ0 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
HOXD1Q9GZZ0 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.16□□□□□ -1.9
HOXD1Q9GZZ0 AL049780.3-201ENST00000624612 1583 ntBASIC3.16□□□□□ -1.9
HOXD1Q9GZZ0 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.15□□□□□ -1.9
HOXD1Q9GZZ0 AC006378.2-201ENST00000623178 2476 ntBASIC3.15□□□□□ -1.9
HOXD1Q9GZZ0 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.15□□□□□ -1.9
HOXD1Q9GZZ0 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.15□□□□□ -1.9
HOXD1Q9GZZ0 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.9
HOXD1Q9GZZ0 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.15□□□□□ -1.9
HOXD1Q9GZZ0 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
HOXD1Q9GZZ0 SNORA62.3-201ENST00000365110 153 ntBASIC3.15□□□□□ -1.91
HOXD1Q9GZZ0 RPL21P3-201ENST00000395517 478 ntBASIC3.15□□□□□ -1.91
HOXD1Q9GZZ0 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.15□□□□□ -1.91
HOXD1Q9GZZ0 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.15□□□□□ -1.91
HOXD1Q9GZZ0 RPS29P4-201ENST00000414733 161 ntBASIC3.15□□□□□ -1.91
HOXD1Q9GZZ0 CRYBB2P1-203ENST00000415709 538 ntBASIC3.15□□□□□ -1.91
HOXD1Q9GZZ0 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.15□□□□□ -1.91
HOXD1Q9GZZ0 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.15□□□□□ -1.91
HOXD1Q9GZZ0 RPL23AP82-202ENST00000427528 469 ntBASIC3.15□□□□□ -1.91
HOXD1Q9GZZ0 AC092017.2-201ENST00000427600 362 ntBASIC3.15□□□□□ -1.91
HOXD1Q9GZZ0 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC3.15□□□□□ -1.91
HOXD1Q9GZZ0 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.15□□□□□ -1.91
HOXD1Q9GZZ0 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC3.15□□□□□ -1.91
HOXD1Q9GZZ0 MTND4LP10-201ENST00000435146 291 ntBASIC3.15□□□□□ -1.91
HOXD1Q9GZZ0 RPL37P21-201ENST00000435890 276 ntBASIC3.15□□□□□ -1.91
HOXD1Q9GZZ0 RPL7P36-201ENST00000444633 681 ntBASIC3.15□□□□□ -1.91
HOXD1Q9GZZ0 GAPDHP27-201ENST00000447427 1020 ntBASIC3.15□□□□□ -1.91
HOXD1Q9GZZ0 AC146507.2-201ENST00000460608 476 ntBASIC3.15□□□□□ -1.91
HOXD1Q9GZZ0 CENPBD1P1-201ENST00000464061 469 ntBASIC3.15□□□□□ -1.91
HOXD1Q9GZZ0 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC3.15□□□□□ -1.91
HOXD1Q9GZZ0 MTND4LP22-201ENST00000508209 276 ntBASIC3.15□□□□□ -1.91
HOXD1Q9GZZ0 AC025881.1-201ENST00000518851 512 ntBASIC3.15□□□□□ -1.91
HOXD1Q9GZZ0 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC3.15□□□□□ -1.91
HOXD1Q9GZZ0 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
HOXD1Q9GZZ0 OR5B10P-201ENST00000532869 642 ntBASIC3.15□□□□□ -1.91
HOXD1Q9GZZ0 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.15□□□□□ -1.91
HOXD1Q9GZZ0 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
HOXD1Q9GZZ0 SETP7-201ENST00000552169 453 ntBASIC3.15□□□□□ -1.91
HOXD1Q9GZZ0 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.15□□□□□ -1.91
HOXD1Q9GZZ0 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms