Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 RPL19P1-201ENST00000411635 428 ntBASIC3.1□□□□□ -1.91
RPAP1Q9BWH6 BTF3P8-201ENST00000414577 526 ntBASIC3.1□□□□□ -1.91
RPAP1Q9BWH6 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC3.1□□□□□ -1.91
RPAP1Q9BWH6 MTCO3P1-205ENST00000422088 832 ntBASIC3.1□□□□□ -1.91
RPAP1Q9BWH6 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC3.1□□□□□ -1.91
RPAP1Q9BWH6 TOMM20P4-201ENST00000427861 435 ntBASIC3.1□□□□□ -1.91
RPAP1Q9BWH6 HMGN1P5-201ENST00000448591 263 ntBASIC3.1□□□□□ -1.91
RPAP1Q9BWH6 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC3.1□□□□□ -1.91
RPAP1Q9BWH6 AC015908.1-201ENST00000478739 476 ntBASIC3.1□□□□□ -1.91
RPAP1Q9BWH6 AC013828.1-201ENST00000481845 158 ntBASIC3.1□□□□□ -1.91
RPAP1Q9BWH6 SRIP1-201ENST00000489235 288 ntBASIC3.1□□□□□ -1.91
RPAP1Q9BWH6 AC112198.4-201ENST00000515450 351 ntBASIC3.1□□□□□ -1.91
RPAP1Q9BWH6 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC3.1□□□□□ -1.91
RPAP1Q9BWH6 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.1□□□□□ -1.91
RPAP1Q9BWH6 AC004486.1-201ENST00000546846 233 ntBASIC3.1□□□□□ -1.91
RPAP1Q9BWH6 MTCYBP27-201ENST00000555160 670 ntBASIC3.1□□□□□ -1.91
RPAP1Q9BWH6 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
RPAP1Q9BWH6 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC3.1□□□□□ -1.91
RPAP1Q9BWH6 AC124016.2-201ENST00000610058 665 ntBASIC3.1□□□□□ -1.91
RPAP1Q9BWH6 ZNF663P-202ENST00000641770 1131 ntBASIC3.1□□□□□ -1.91
RPAP1Q9BWH6 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
RPAP1Q9BWH6 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.09□□□□□ -1.91
RPAP1Q9BWH6 ZNF658B-202ENST00000615961 3375 ntBASIC3.09□□□□□ -1.91
RPAP1Q9BWH6 RNU6-1300P-201ENST00000391046 108 ntBASIC3.09□□□□□ -1.92
RPAP1Q9BWH6 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
RPAP1Q9BWH6 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC3.09□□□□□ -1.92
RPAP1Q9BWH6 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC3.09□□□□□ -1.92
RPAP1Q9BWH6 RABEPKP1-201ENST00000440529 1026 ntBASIC3.09□□□□□ -1.92
RPAP1Q9BWH6 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC3.09□□□□□ -1.92
RPAP1Q9BWH6 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.09□□□□□ -1.92
RPAP1Q9BWH6 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC3.09□□□□□ -1.92
RPAP1Q9BWH6 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
RPAP1Q9BWH6 RNU1-61P-201ENST00000516107 151 ntBASIC3.09□□□□□ -1.92
RPAP1Q9BWH6 RPL7P20-201ENST00000520308 745 ntBASIC3.09□□□□□ -1.92
RPAP1Q9BWH6 MTND1P36-201ENST00000522384 936 ntBASIC3.09□□□□□ -1.92
RPAP1Q9BWH6 SETP2-201ENST00000553886 926 ntBASIC3.09□□□□□ -1.92
RPAP1Q9BWH6 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.92
RPAP1Q9BWH6 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.09□□□□□ -1.92
RPAP1Q9BWH6 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC3.09□□□□□ -1.92
RPAP1Q9BWH6 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC3.09□□□□□ -1.92
RPAP1Q9BWH6 MIR3670-2-201ENST00000582974 65 ntBASIC3.09□□□□□ -1.92
RPAP1Q9BWH6 MIR3670-1-201ENST00000584160 65 ntBASIC3.09□□□□□ -1.92
RPAP1Q9BWH6 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC3.09□□□□□ -1.92
RPAP1Q9BWH6 MIR3670-3-201ENST00000584855 65 ntBASIC3.09□□□□□ -1.92
RPAP1Q9BWH6 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC3.09□□□□□ -1.92
RPAP1Q9BWH6 AC012669.1-201ENST00000603209 283 ntBASIC3.09□□□□□ -1.92
RPAP1Q9BWH6 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.09□□□□□ -1.92
RPAP1Q9BWH6 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.92
RPAP1Q9BWH6 MIR3670-4-201ENST00000612260 65 ntBASIC3.09□□□□□ -1.92
RPAP1Q9BWH6 AC087821.2-201ENST00000637086 450 ntBASIC3.09□□□□□ -1.92
RPAP1Q9BWH6 GDI2P1-201ENST00000429312 1336 ntBASIC3.09□□□□□ -1.92
RPAP1Q9BWH6 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
RPAP1Q9BWH6 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC3.09□□□□□ -1.92
RPAP1Q9BWH6 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
RPAP1Q9BWH6 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.08□□□□□ -1.92
RPAP1Q9BWH6 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
RPAP1Q9BWH6 SNORA3.2-201ENST00000408221 125 ntBASIC3.08□□□□□ -1.92
RPAP1Q9BWH6 AC092447.6-201ENST00000414578 210 ntBASIC3.08□□□□□ -1.92
RPAP1Q9BWH6 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.08□□□□□ -1.92
RPAP1Q9BWH6 ZNF736P7Y-201ENST00000425158 820 ntBASIC3.08□□□□□ -1.92
RPAP1Q9BWH6 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.08□□□□□ -1.92
RPAP1Q9BWH6 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC3.08□□□□□ -1.92
RPAP1Q9BWH6 AC012497.1-201ENST00000429392 575 ntBASIC3.08□□□□□ -1.92
RPAP1Q9BWH6 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.08□□□□□ -1.92
RPAP1Q9BWH6 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC3.08□□□□□ -1.92
RPAP1Q9BWH6 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC3.08□□□□□ -1.92
RPAP1Q9BWH6 AC092393.1-201ENST00000439625 742 ntBASIC3.08□□□□□ -1.92
RPAP1Q9BWH6 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.08□□□□□ -1.92
RPAP1Q9BWH6 snoU13.15-201ENST00000459407 104 ntBASIC3.08□□□□□ -1.92
RPAP1Q9BWH6 KLRA1P-201ENST00000503499 986 ntBASIC3.08□□□□□ -1.92
RPAP1Q9BWH6 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC3.08□□□□□ -1.92
RPAP1Q9BWH6 ANXA2P1-201ENST00000505539 926 ntBASIC3.08□□□□□ -1.92
RPAP1Q9BWH6 AC008837.1-201ENST00000511513 412 ntBASIC3.08□□□□□ -1.92
RPAP1Q9BWH6 TBCAP3-201ENST00000512475 312 ntBASIC3.08□□□□□ -1.92
RPAP1Q9BWH6 RNU6-27P-201ENST00000516146 107 ntBASIC3.08□□□□□ -1.92
RPAP1Q9BWH6 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC3.08□□□□□ -1.92
RPAP1Q9BWH6 EEF1A1P37-201ENST00000522748 715 ntBASIC3.08□□□□□ -1.92
RPAP1Q9BWH6 MTCO3P15-201ENST00000526563 574 ntBASIC3.08□□□□□ -1.92
RPAP1Q9BWH6 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC3.08□□□□□ -1.92
RPAP1Q9BWH6 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC3.08□□□□□ -1.92
RPAP1Q9BWH6 MIR5092-201ENST00000583139 88 ntBASIC3.08□□□□□ -1.92
RPAP1Q9BWH6 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
RPAP1Q9BWH6 RPL23AP88-201ENST00000605759 454 ntBASIC3.08□□□□□ -1.92
RPAP1Q9BWH6 AP002802.2-201ENST00000605877 235 ntBASIC3.08□□□□□ -1.92
RPAP1Q9BWH6 AL592148.2-201ENST00000612210 372 ntBASIC3.08□□□□□ -1.92
RPAP1Q9BWH6 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.08□□□□□ -1.92
RPAP1Q9BWH6 WARS-244ENST00000627608 123 ntTSL 5 BASIC3.08□□□□□ -1.92
RPAP1Q9BWH6 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC3.08□□□□□ -1.92
RPAP1Q9BWH6 ANKRD62P1-201ENST00000434304 1623 ntBASIC3.08□□□□□ -1.92
RPAP1Q9BWH6 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.08□□□□□ -1.92
RPAP1Q9BWH6 AC103988.1-201ENST00000566382 2177 ntBASIC3.07□□□□□ -1.92
RPAP1Q9BWH6 VTRNA1-1-201ENST00000363120 99 ntBASIC3.07□□□□□ -1.92
RPAP1Q9BWH6 U8.2-201ENST00000363156 134 ntBASIC3.07□□□□□ -1.92
RPAP1Q9BWH6 DEFA7P-201ENST00000382676 285 ntBASIC3.07□□□□□ -1.92
RPAP1Q9BWH6 RNU6-657P-201ENST00000383904 107 ntBASIC3.07□□□□□ -1.92
RPAP1Q9BWH6 SNORA36C-201ENST00000384289 132 ntBASIC3.07□□□□□ -1.92
RPAP1Q9BWH6 MIR27B-201ENST00000385129 97 ntBASIC3.07□□□□□ -1.92
RPAP1Q9BWH6 CD3D-202ENST00000392884 476 ntTSL 2 BASIC3.07□□□□□ -1.92
RPAP1Q9BWH6 RNU2-28P-201ENST00000410457 189 ntBASIC3.07□□□□□ -1.92
RPAP1Q9BWH6 AC069282.1-201ENST00000411911 526 ntBASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms