Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
UPK3BQ9BT76 AC026241.1-201ENST00000517873 2142 ntBASIC1.93□□□□□ -2.1
UPK3BQ9BT76 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC1.92□□□□□ -2.1
UPK3BQ9BT76 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
UPK3BQ9BT76 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
UPK3BQ9BT76 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
UPK3BQ9BT76 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
UPK3BQ9BT76 RNA5SP354-201ENST00000391247 136 ntBASIC1.92□□□□□ -2.1
UPK3BQ9BT76 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC1.92□□□□□ -2.1
UPK3BQ9BT76 RNA5SP184-201ENST00000411071 108 ntBASIC1.92□□□□□ -2.1
UPK3BQ9BT76 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC1.92□□□□□ -2.1
UPK3BQ9BT76 AL451074.5-201ENST00000415894 435 ntBASIC1.92□□□□□ -2.1
UPK3BQ9BT76 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC1.92□□□□□ -2.1
UPK3BQ9BT76 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC1.92□□□□□ -2.1
UPK3BQ9BT76 AC063976.3-201ENST00000426849 329 ntBASIC1.92□□□□□ -2.1
UPK3BQ9BT76 AL512637.2-201ENST00000431287 1256 ntBASIC1.92□□□□□ -2.1
UPK3BQ9BT76 ARPC3P1-201ENST00000437218 533 ntBASIC1.92□□□□□ -2.1
UPK3BQ9BT76 RPL23AP74-201ENST00000437246 471 ntBASIC1.92□□□□□ -2.1
UPK3BQ9BT76 AC000041.1-201ENST00000439655 175 ntBASIC1.92□□□□□ -2.1
UPK3BQ9BT76 BTBD7P2-201ENST00000441962 620 ntBASIC1.92□□□□□ -2.1
UPK3BQ9BT76 USP9YP34-201ENST00000453983 808 ntBASIC1.92□□□□□ -2.1
UPK3BQ9BT76 snoU13.28-201ENST00000459235 104 ntBASIC1.92□□□□□ -2.1
UPK3BQ9BT76 RPL21P41-201ENST00000459863 264 ntBASIC1.92□□□□□ -2.1
UPK3BQ9BT76 RPL30P5-201ENST00000494923 336 ntBASIC1.92□□□□□ -2.1
UPK3BQ9BT76 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC1.92□□□□□ -2.1
UPK3BQ9BT76 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC1.92□□□□□ -2.1
UPK3BQ9BT76 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC1.92□□□□□ -2.1
UPK3BQ9BT76 AC010460.2-201ENST00000509054 677 ntBASIC1.92□□□□□ -2.1
UPK3BQ9BT76 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC1.92□□□□□ -2.1
UPK3BQ9BT76 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC1.92□□□□□ -2.1
UPK3BQ9BT76 SNORA31.21-201ENST00000517180 77 ntBASIC1.92□□□□□ -2.1
UPK3BQ9BT76 AC023632.1-201ENST00000518463 375 ntBASIC1.92□□□□□ -2.1
UPK3BQ9BT76 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC1.92□□□□□ -2.1
UPK3BQ9BT76 AC090136.1-201ENST00000520009 240 ntBASIC1.92□□□□□ -2.1
UPK3BQ9BT76 AC027309.2-201ENST00000520566 192 ntBASIC1.92□□□□□ -2.1
UPK3BQ9BT76 MTCO1P47-201ENST00000523889 1271 ntBASIC1.92□□□□□ -2.1
UPK3BQ9BT76 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
UPK3BQ9BT76 AP000889.1-201ENST00000530968 660 ntBASIC1.92□□□□□ -2.1
UPK3BQ9BT76 AP000857.1-201ENST00000532151 543 ntBASIC1.92□□□□□ -2.1
UPK3BQ9BT76 AC024224.1-201ENST00000538284 609 ntBASIC1.92□□□□□ -2.1
UPK3BQ9BT76 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
UPK3BQ9BT76 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC1.92□□□□□ -2.1
UPK3BQ9BT76 SNRPGP1-201ENST00000553864 222 ntBASIC1.92□□□□□ -2.1
UPK3BQ9BT76 AC044913.1-201ENST00000557200 430 ntBASIC1.92□□□□□ -2.1
UPK3BQ9BT76 OR4K8P-201ENST00000578842 1048 ntBASIC1.92□□□□□ -2.1
UPK3BQ9BT76 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC1.92□□□□□ -2.1
UPK3BQ9BT76 AC105224.1-201ENST00000587055 421 ntBASIC1.92□□□□□ -2.1
UPK3BQ9BT76 AC090330.1-201ENST00000588646 764 ntBASIC1.92□□□□□ -2.1
UPK3BQ9BT76 AC008277.2-201ENST00000605196 797 ntBASIC1.92□□□□□ -2.1
UPK3BQ9BT76 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC1.92□□□□□ -2.1
UPK3BQ9BT76 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC1.92□□□□□ -2.1
UPK3BQ9BT76 DUXAP10-204ENST00000612052 616 ntBASIC1.92□□□□□ -2.1
UPK3BQ9BT76 VN1R7P-201ENST00000619242 903 ntBASIC1.92□□□□□ -2.1
UPK3BQ9BT76 AC090772.4-201ENST00000623599 362 ntBASIC1.92□□□□□ -2.1
UPK3BQ9BT76 AP003485.2-201ENST00000623636 610 ntBASIC1.92□□□□□ -2.1
UPK3BQ9BT76 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC1.92□□□□□ -2.1
UPK3BQ9BT76 AC009039.2-201ENST00000624524 529 ntBASIC1.92□□□□□ -2.1
UPK3BQ9BT76 U6.101-201ENST00000637707 76 ntBASIC1.92□□□□□ -2.1
UPK3BQ9BT76 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC1.92□□□□□ -2.1
UPK3BQ9BT76 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC1.92□□□□□ -2.1
UPK3BQ9BT76 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
UPK3BQ9BT76 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC1.91□□□□□ -2.1
UPK3BQ9BT76 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC1.91□□□□□ -2.1
UPK3BQ9BT76 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
UPK3BQ9BT76 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
UPK3BQ9BT76 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC1.91□□□□□ -2.1
UPK3BQ9BT76 SNORA18.3-201ENST00000384122 132 ntBASIC1.91□□□□□ -2.1
UPK3BQ9BT76 RNU6-1300P-201ENST00000391046 108 ntBASIC1.91□□□□□ -2.1
UPK3BQ9BT76 AC019178.2-201ENST00000423595 505 ntBASIC1.91□□□□□ -2.1
UPK3BQ9BT76 BLOC1S2P1-201ENST00000428431 301 ntBASIC1.91□□□□□ -2.1
UPK3BQ9BT76 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC1.91□□□□□ -2.1
UPK3BQ9BT76 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC1.91□□□□□ -2.1
UPK3BQ9BT76 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC1.91□□□□□ -2.1
UPK3BQ9BT76 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC1.91□□□□□ -2.1
UPK3BQ9BT76 SUMO2P2-201ENST00000456482 255 ntBASIC1.91□□□□□ -2.1
UPK3BQ9BT76 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC1.91□□□□□ -2.1
UPK3BQ9BT76 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC1.91□□□□□ -2.1
UPK3BQ9BT76 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
UPK3BQ9BT76 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC1.91□□□□□ -2.1
UPK3BQ9BT76 AC147055.4-201ENST00000504399 745 ntBASIC1.91□□□□□ -2.1
UPK3BQ9BT76 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC1.91□□□□□ -2.1
UPK3BQ9BT76 AC113420.1-201ENST00000507903 571 ntBASIC1.91□□□□□ -2.1
UPK3BQ9BT76 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC1.91□□□□□ -2.1
UPK3BQ9BT76 MEPE-206ENST00000511670 550 ntTSL 4 BASIC1.91□□□□□ -2.1
UPK3BQ9BT76 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC1.91□□□□□ -2.1
UPK3BQ9BT76 RNU4ATAC17P-201ENST00000517272 120 ntBASIC1.91□□□□□ -2.1
UPK3BQ9BT76 COX6CP8-201ENST00000522620 226 ntBASIC1.91□□□□□ -2.1
UPK3BQ9BT76 RGS4-209ENST00000531057 544 ntTSL 4 BASIC1.91□□□□□ -2.1
UPK3BQ9BT76 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
UPK3BQ9BT76 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC1.91□□□□□ -2.1
UPK3BQ9BT76 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC1.91□□□□□ -2.1
UPK3BQ9BT76 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC1.91□□□□□ -2.1
UPK3BQ9BT76 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC1.91□□□□□ -2.1
UPK3BQ9BT76 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC1.91□□□□□ -2.1
UPK3BQ9BT76 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC1.91□□□□□ -2.1
UPK3BQ9BT76 MIR3162-201ENST00000581818 82 ntBASIC1.91□□□□□ -2.1
UPK3BQ9BT76 MIR5194-201ENST00000582634 120 ntBASIC1.91□□□□□ -2.1
UPK3BQ9BT76 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC1.91□□□□□ -2.1
UPK3BQ9BT76 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
UPK3BQ9BT76 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 171.9 ms