Protein–RNA interactions for Protein: Q9BRP4

PAAF1, Proteasomal ATPase-associated factor 1, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1Q9BRP4 AC022483.1-201ENST00000514020 567 ntBASIC3.95□□□□□ -1.78
PAAF1Q9BRP4 AP004371.1-201ENST00000525240 214 ntBASIC3.95□□□□□ -1.78
PAAF1Q9BRP4 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC3.95□□□□□ -1.78
PAAF1Q9BRP4 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC3.95□□□□□ -1.78
PAAF1Q9BRP4 AC027807.1-201ENST00000559921 996 ntBASIC3.95□□□□□ -1.78
PAAF1Q9BRP4 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC3.95□□□□□ -1.78
PAAF1Q9BRP4 SRGNP1-201ENST00000603392 451 ntBASIC3.95□□□□□ -1.78
PAAF1Q9BRP4 AC008277.2-201ENST00000605196 797 ntBASIC3.95□□□□□ -1.78
PAAF1Q9BRP4 U6atac.1-201ENST00000616025 117 ntBASIC3.95□□□□□ -1.78
PAAF1Q9BRP4 AC084757.4-201ENST00000616350 526 ntBASIC3.95□□□□□ -1.78
PAAF1Q9BRP4 OR5H6-203ENST00000642105 978 ntBASIC3.95□□□□□ -1.78
PAAF1Q9BRP4 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC3.95□□□□□ -1.78
PAAF1Q9BRP4 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
PAAF1Q9BRP4 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
PAAF1Q9BRP4 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
PAAF1Q9BRP4 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
PAAF1Q9BRP4 MTCO1P12-201ENST00000414273 1543 ntBASIC3.95□□□□□ -1.78
PAAF1Q9BRP4 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.95□□□□□ -1.78
PAAF1Q9BRP4 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
PAAF1Q9BRP4 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
PAAF1Q9BRP4 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.94□□□□□ -1.78
PAAF1Q9BRP4 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
PAAF1Q9BRP4 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
PAAF1Q9BRP4 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
PAAF1Q9BRP4 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
PAAF1Q9BRP4 AC007685.1-201ENST00000329806 452 ntBASIC3.94□□□□□ -1.78
PAAF1Q9BRP4 RNA5SP235-201ENST00000365411 114 ntBASIC3.94□□□□□ -1.78
PAAF1Q9BRP4 SNORA20.2-201ENST00000383922 131 ntBASIC3.94□□□□□ -1.78
PAAF1Q9BRP4 RNU6-1074P-201ENST00000383995 104 ntBASIC3.94□□□□□ -1.78
PAAF1Q9BRP4 DBIP2-201ENST00000419076 262 ntBASIC3.94□□□□□ -1.78
PAAF1Q9BRP4 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.94□□□□□ -1.78
PAAF1Q9BRP4 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC3.94□□□□□ -1.78
PAAF1Q9BRP4 TRIM60P10Y-201ENST00000425589 751 ntBASIC3.94□□□□□ -1.78
PAAF1Q9BRP4 AL159987.2-201ENST00000432754 307 ntBASIC3.94□□□□□ -1.78
PAAF1Q9BRP4 TRIM60P8Y-201ENST00000436338 762 ntBASIC3.94□□□□□ -1.78
PAAF1Q9BRP4 MTATP6P13-201ENST00000438531 667 ntBASIC3.94□□□□□ -1.78
PAAF1Q9BRP4 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.94□□□□□ -1.78
PAAF1Q9BRP4 PRSS3P4-201ENST00000453323 162 ntBASIC3.94□□□□□ -1.78
PAAF1Q9BRP4 AC007967.1-201ENST00000455422 1159 ntBASIC3.94□□□□□ -1.78
PAAF1Q9BRP4 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC3.94□□□□□ -1.78
PAAF1Q9BRP4 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.94□□□□□ -1.78
PAAF1Q9BRP4 AC020893.1-201ENST00000502452 580 ntBASIC3.94□□□□□ -1.78
PAAF1Q9BRP4 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC3.94□□□□□ -1.78
PAAF1Q9BRP4 MTND1P5-201ENST00000517906 940 ntBASIC3.94□□□□□ -1.78
PAAF1Q9BRP4 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.94□□□□□ -1.78
PAAF1Q9BRP4 OR5G4P-201ENST00000525251 760 ntBASIC3.94□□□□□ -1.78
PAAF1Q9BRP4 AP000857.1-201ENST00000532151 543 ntBASIC3.94□□□□□ -1.78
PAAF1Q9BRP4 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.94□□□□□ -1.78
PAAF1Q9BRP4 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC3.94□□□□□ -1.78
PAAF1Q9BRP4 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.94□□□□□ -1.78
PAAF1Q9BRP4 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.94□□□□□ -1.78
PAAF1Q9BRP4 OR4T1P-201ENST00000554933 911 ntBASIC3.94□□□□□ -1.78
PAAF1Q9BRP4 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.94□□□□□ -1.78
PAAF1Q9BRP4 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.94□□□□□ -1.78
PAAF1Q9BRP4 AP001429.1-201ENST00000602568 530 ntBASIC3.94□□□□□ -1.78
PAAF1Q9BRP4 AC007179.3-201ENST00000604976 235 ntBASIC3.94□□□□□ -1.78
PAAF1Q9BRP4 AP000860.1-201ENST00000605250 559 ntBASIC3.94□□□□□ -1.78
PAAF1Q9BRP4 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.94□□□□□ -1.78
PAAF1Q9BRP4 AC092794.1-201ENST00000612734 582 ntBASIC3.94□□□□□ -1.78
PAAF1Q9BRP4 AC006338.1-201ENST00000618453 749 ntBASIC3.94□□□□□ -1.78
PAAF1Q9BRP4 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.94□□□□□ -1.78
PAAF1Q9BRP4 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC3.94□□□□□ -1.78
PAAF1Q9BRP4 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC3.94□□□□□ -1.78
PAAF1Q9BRP4 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
PAAF1Q9BRP4 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.94□□□□□ -1.78
PAAF1Q9BRP4 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
PAAF1Q9BRP4 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.94□□□□□ -1.78
PAAF1Q9BRP4 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
PAAF1Q9BRP4 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
PAAF1Q9BRP4 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
PAAF1Q9BRP4 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
PAAF1Q9BRP4 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.93□□□□□ -1.78
PAAF1Q9BRP4 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC3.93□□□□□ -1.78
PAAF1Q9BRP4 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
PAAF1Q9BRP4 RNU6-1155P-201ENST00000363554 107 ntBASIC3.93□□□□□ -1.78
PAAF1Q9BRP4 RNY3P13-201ENST00000365542 102 ntBASIC3.93□□□□□ -1.78
PAAF1Q9BRP4 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC3.93□□□□□ -1.78
PAAF1Q9BRP4 MIR218-2-201ENST00000385006 110 ntBASIC3.93□□□□□ -1.78
PAAF1Q9BRP4 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
PAAF1Q9BRP4 HSPD1P16-201ENST00000402302 394 ntBASIC3.93□□□□□ -1.78
PAAF1Q9BRP4 SNORA11.1-201ENST00000408133 129 ntBASIC3.93□□□□□ -1.78
PAAF1Q9BRP4 RAD23BP2-201ENST00000416003 1207 ntBASIC3.93□□□□□ -1.78
PAAF1Q9BRP4 AC099677.1-201ENST00000420575 175 ntBASIC3.93□□□□□ -1.78
PAAF1Q9BRP4 AP000907.1-201ENST00000428428 510 ntBASIC3.93□□□□□ -1.78
PAAF1Q9BRP4 AL451074.3-201ENST00000437709 472 ntBASIC3.93□□□□□ -1.78
PAAF1Q9BRP4 AC093156.1-201ENST00000440382 670 ntBASIC3.93□□□□□ -1.78
PAAF1Q9BRP4 RPL21P23-201ENST00000446654 460 ntBASIC3.93□□□□□ -1.78
PAAF1Q9BRP4 C1DP4-201ENST00000455429 424 ntBASIC3.93□□□□□ -1.78
PAAF1Q9BRP4 RPL7P23-201ENST00000493874 747 ntBASIC3.93□□□□□ -1.78
PAAF1Q9BRP4 AC091133.4-201ENST00000511142 308 ntBASIC3.93□□□□□ -1.78
PAAF1Q9BRP4 SUMO2P20-201ENST00000520803 283 ntBASIC3.93□□□□□ -1.78
PAAF1Q9BRP4 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.93□□□□□ -1.78
PAAF1Q9BRP4 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.93□□□□□ -1.78
PAAF1Q9BRP4 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC3.93□□□□□ -1.78
PAAF1Q9BRP4 AL845331.3-202ENST00000562856 261 ntBASIC3.93□□□□□ -1.78
PAAF1Q9BRP4 AP001094.1-201ENST00000579805 193 ntBASIC3.93□□□□□ -1.78
PAAF1Q9BRP4 MTATP6P3-201ENST00000581686 676 ntBASIC3.93□□□□□ -1.78
PAAF1Q9BRP4 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.93□□□□□ -1.78
PAAF1Q9BRP4 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.93□□□□□ -1.78
PAAF1Q9BRP4 SNRPGP15-201ENST00000600149 222 ntBASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms