Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 AL353691.1-201ENST00000451332 387 ntBASIC2.54□□□□□ -2
FOXC2Q99958 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC2.54□□□□□ -2
FOXC2Q99958 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC2.54□□□□□ -2
FOXC2Q99958 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC2.54□□□□□ -2
FOXC2Q99958 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC2.54□□□□□ -2
FOXC2Q99958 RN7SKP282-201ENST00000516824 299 ntBASIC2.54□□□□□ -2
FOXC2Q99958 MIR2276-201ENST00000516886 89 ntBASIC2.54□□□□□ -2
FOXC2Q99958 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC2.54□□□□□ -2
FOXC2Q99958 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC2.54□□□□□ -2
FOXC2Q99958 OR7K1P-201ENST00000546439 926 ntBASIC2.54□□□□□ -2
FOXC2Q99958 TRAV37-201ENST00000553906 342 ntBASIC2.54□□□□□ -2
FOXC2Q99958 HSPE1P3-201ENST00000559254 309 ntBASIC2.54□□□□□ -2
FOXC2Q99958 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC2.54□□□□□ -2
FOXC2Q99958 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC2.54□□□□□ -2
FOXC2Q99958 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC2.54□□□□□ -2
FOXC2Q99958 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.54□□□□□ -2
FOXC2Q99958 AC138915.2-201ENST00000569776 97 ntBASIC2.54□□□□□ -2
FOXC2Q99958 MIR3921-201ENST00000577308 85 ntBASIC2.54□□□□□ -2
FOXC2Q99958 MIR4769-201ENST00000584126 77 ntBASIC2.54□□□□□ -2
FOXC2Q99958 AL445435.1-201ENST00000604232 665 ntBASIC2.54□□□□□ -2
FOXC2Q99958 AC144521.1-201ENST00000607148 956 ntBASIC2.54□□□□□ -2
FOXC2Q99958 AC011330.2-201ENST00000621680 635 ntBASIC2.54□□□□□ -2
FOXC2Q99958 AC027309.3-201ENST00000623419 351 ntBASIC2.54□□□□□ -2
FOXC2Q99958 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.54□□□□□ -2
FOXC2Q99958 AC008568.2-201ENST00000623862 2313 ntBASIC2.54□□□□□ -2
FOXC2Q99958 AC087359.1-201ENST00000508335 1740 ntBASIC2.54□□□□□ -2
FOXC2Q99958 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.53□□□□□ -2
FOXC2Q99958 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC2.53□□□□□ -2
FOXC2Q99958 RNU6-216P-201ENST00000363282 104 ntBASIC2.53□□□□□ -2
FOXC2Q99958 NFIB-202ENST00000380924 840 ntTSL 5 BASIC2.53□□□□□ -2
FOXC2Q99958 SNORD67-201ENST00000390833 111 ntBASIC2.53□□□□□ -2
FOXC2Q99958 AL592310.1-201ENST00000414330 671 ntBASIC2.53□□□□□ -2
FOXC2Q99958 AC013410.2-201ENST00000422627 201 ntBASIC2.53□□□□□ -2
FOXC2Q99958 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC2.53□□□□□ -2
FOXC2Q99958 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC2.53□□□□□ -2
FOXC2Q99958 AC007742.1-201ENST00000425789 329 ntBASIC2.53□□□□□ -2
FOXC2Q99958 MTCO1P3-201ENST00000429327 192 ntBASIC2.53□□□□□ -2
FOXC2Q99958 AL590233.1-201ENST00000430017 456 ntBASIC2.53□□□□□ -2
FOXC2Q99958 MYL8P-204ENST00000431574 518 ntBASIC2.53□□□□□ -2
FOXC2Q99958 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC2.53□□□□□ -2
FOXC2Q99958 RPS20P5-201ENST00000434808 360 ntBASIC2.53□□□□□ -2
FOXC2Q99958 ELOCP26-201ENST00000436067 329 ntBASIC2.53□□□□□ -2
FOXC2Q99958 RPL23AP58-201ENST00000440453 469 ntBASIC2.53□□□□□ -2
FOXC2Q99958 RNF2P1-201ENST00000442955 1010 ntBASIC2.53□□□□□ -2
FOXC2Q99958 MTCYBP42-201ENST00000444653 1130 ntBASIC2.53□□□□□ -2
FOXC2Q99958 RPL39P6-201ENST00000448289 150 ntBASIC2.53□□□□□ -2
FOXC2Q99958 PNPLA4P1-201ENST00000458328 305 ntBASIC2.53□□□□□ -2
FOXC2Q99958 snoU13.26-201ENST00000459452 105 ntBASIC2.53□□□□□ -2
FOXC2Q99958 AC117440.1-201ENST00000474107 571 ntBASIC2.53□□□□□ -2
FOXC2Q99958 RPS26P21-201ENST00000475397 348 ntBASIC2.53□□□□□ -2
FOXC2Q99958 AC092185.1-201ENST00000491371 97 ntBASIC2.53□□□□□ -2
FOXC2Q99958 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.53□□□□□ -2
FOXC2Q99958 OR4G11P-201ENST00000492842 939 ntBASIC2.53□□□□□ -2
FOXC2Q99958 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC2.53□□□□□ -2
FOXC2Q99958 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC2.53□□□□□ -2
FOXC2Q99958 AC119751.4-201ENST00000507498 357 ntBASIC2.53□□□□□ -2
FOXC2Q99958 AL359273.1-201ENST00000510918 627 ntBASIC2.53□□□□□ -2
FOXC2Q99958 RNU6-1028P-201ENST00000517164 93 ntBASIC2.53□□□□□ -2
FOXC2Q99958 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC2.53□□□□□ -2
FOXC2Q99958 AC104027.1-201ENST00000521887 300 ntBASIC2.53□□□□□ -2
FOXC2Q99958 EEF1A1P37-201ENST00000522748 715 ntBASIC2.53□□□□□ -2
FOXC2Q99958 HSPA8P13-201ENST00000523715 472 ntBASIC2.53□□□□□ -2
FOXC2Q99958 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC2.53□□□□□ -2
FOXC2Q99958 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC2.53□□□□□ -2
FOXC2Q99958 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC2.53□□□□□ -2
FOXC2Q99958 MIR3609-201ENST00000582661 80 ntBASIC2.53□□□□□ -2
FOXC2Q99958 BNIP3P39-201ENST00000601077 554 ntBASIC2.53□□□□□ -2
FOXC2Q99958 AL022067.1-201ENST00000602426 454 ntBASIC2.53□□□□□ -2
FOXC2Q99958 DUXAP4-201ENST00000603046 613 ntBASIC2.53□□□□□ -2
FOXC2Q99958 AP000254.1-201ENST00000609934 520 ntBASIC2.53□□□□□ -2
FOXC2Q99958 RNU6-1192P-201ENST00000612197 107 ntBASIC2.53□□□□□ -2
FOXC2Q99958 AC005332.6-201ENST00000613178 446 ntBASIC2.53□□□□□ -2
FOXC2Q99958 RNU6-489P-201ENST00000618289 107 ntBASIC2.53□□□□□ -2
FOXC2Q99958 AC104985.3-201ENST00000623479 597 ntBASIC2.53□□□□□ -2
FOXC2Q99958 AC099654.8-201ENST00000637757 681 ntBASIC2.53□□□□□ -2
FOXC2Q99958 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.53□□□□□ -2
FOXC2Q99958 AC097714.1-201ENST00000511272 1647 ntBASIC2.53□□□□□ -2
FOXC2Q99958 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC2.52□□□□□ -2.01
FOXC2Q99958 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
FOXC2Q99958 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC2.52□□□□□ -2.01
FOXC2Q99958 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
FOXC2Q99958 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
FOXC2Q99958 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
FOXC2Q99958 MIR620-201ENST00000385232 95 ntBASIC2.52□□□□□ -2.01
FOXC2Q99958 RNU6-1197P-201ENST00000391183 107 ntBASIC2.52□□□□□ -2.01
FOXC2Q99958 SNRPEP2-201ENST00000397592 279 ntBASIC2.52□□□□□ -2.01
FOXC2Q99958 RNU2-43P-201ENST00000410306 190 ntBASIC2.52□□□□□ -2.01
FOXC2Q99958 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC2.52□□□□□ -2.01
FOXC2Q99958 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC2.52□□□□□ -2.01
FOXC2Q99958 TOMM20P4-201ENST00000427861 435 ntBASIC2.52□□□□□ -2.01
FOXC2Q99958 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.52□□□□□ -2.01
FOXC2Q99958 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC2.52□□□□□ -2.01
FOXC2Q99958 AL513328.1-201ENST00000446460 224 ntBASIC2.52□□□□□ -2.01
FOXC2Q99958 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC2.52□□□□□ -2.01
FOXC2Q99958 OFD1P3Y-201ENST00000453312 783 ntBASIC2.52□□□□□ -2.01
FOXC2Q99958 AC026410.2-201ENST00000460281 156 ntBASIC2.52□□□□□ -2.01
FOXC2Q99958 AC128713.1-201ENST00000471495 306 ntBASIC2.52□□□□□ -2.01
FOXC2Q99958 RPL31P60-201ENST00000478450 367 ntBASIC2.52□□□□□ -2.01
FOXC2Q99958 AC090453.1-201ENST00000495560 436 ntBASIC2.52□□□□□ -2.01
FOXC2Q99958 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms