Protein–RNA interactions for Protein: Q96RL7

VPS13A, Vacuolar protein sorting-associated protein 13A, humanhuman

Predictions only

Length 3,174 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13AQ96RL7 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC1.45□□□□□ -2.18
VPS13AQ96RL7 PRELID2P1-201ENST00000552837 301 ntBASIC1.45□□□□□ -2.18
VPS13AQ96RL7 MIR4448-201ENST00000584360 86 ntBASIC1.45□□□□□ -2.18
VPS13AQ96RL7 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
VPS13AQ96RL7 BNIP3P4-201ENST00000604946 565 ntBASIC1.45□□□□□ -2.18
VPS13AQ96RL7 AC096772.1-201ENST00000609146 564 ntBASIC1.45□□□□□ -2.18
VPS13AQ96RL7 MTCO1P6-201ENST00000481192 1384 ntBASIC1.45□□□□□ -2.18
VPS13AQ96RL7 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.45□□□□□ -2.18
VPS13AQ96RL7 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.45□□□□□ -2.18
VPS13AQ96RL7 RSL24D1P2-201ENST00000445584 366 ntBASIC1.45□□□□□ -2.18
VPS13AQ96RL7 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
VPS13AQ96RL7 RFC5P1-201ENST00000454419 874 ntBASIC1.45□□□□□ -2.18
VPS13AQ96RL7 AC090453.1-201ENST00000495560 436 ntBASIC1.45□□□□□ -2.18
VPS13AQ96RL7 AC021146.7-201ENST00000509604 775 ntBASIC1.45□□□□□ -2.18
VPS13AQ96RL7 MTCYBP19-201ENST00000517463 1124 ntBASIC1.45□□□□□ -2.18
VPS13AQ96RL7 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC1.45□□□□□ -2.18
VPS13AQ96RL7 CYP3A137P-201ENST00000562436 69 ntBASIC1.45□□□□□ -2.18
VPS13AQ96RL7 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC1.45□□□□□ -2.18
VPS13AQ96RL7 AC012640.5-201ENST00000623897 319 ntBASIC1.45□□□□□ -2.18
VPS13AQ96RL7 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
VPS13AQ96RL7 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
VPS13AQ96RL7 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
VPS13AQ96RL7 SGO1P2-201ENST00000429458 1589 ntBASIC1.45□□□□□ -2.18
VPS13AQ96RL7 THAP5P1-201ENST00000439089 262 ntBASIC1.45□□□□□ -2.18
VPS13AQ96RL7 CALM1P1-201ENST00000442082 433 ntBASIC1.45□□□□□ -2.18
VPS13AQ96RL7 RPL7P5-201ENST00000471472 736 ntBASIC1.45□□□□□ -2.18
VPS13AQ96RL7 AC008885.2-201ENST00000509506 930 ntBASIC1.45□□□□□ -2.18
VPS13AQ96RL7 AC023813.2-201ENST00000564321 469 ntBASIC1.45□□□□□ -2.18
VPS13AQ96RL7 AL049779.4-201ENST00000604500 156 ntBASIC1.45□□□□□ -2.18
VPS13AQ96RL7 AC083806.3-201ENST00000614016 455 ntBASIC1.45□□□□□ -2.18
VPS13AQ96RL7 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.44□□□□□ -2.18
VPS13AQ96RL7 SNORD48-201ENST00000364953 64 ntBASIC1.44□□□□□ -2.18
VPS13AQ96RL7 AC005534.2-201ENST00000431047 433 ntBASIC1.44□□□□□ -2.18
VPS13AQ96RL7 MTCYBP12-201ENST00000440559 1134 ntBASIC1.44□□□□□ -2.18
VPS13AQ96RL7 MTCO3P44-201ENST00000510977 541 ntBASIC1.44□□□□□ -2.18
VPS13AQ96RL7 RPL23AP78-201ENST00000599928 470 ntBASIC1.44□□□□□ -2.18
VPS13AQ96RL7 AL592494.3-201ENST00000609485 464 ntBASIC1.44□□□□□ -2.18
VPS13AQ96RL7 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
VPS13AQ96RL7 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC1.44□□□□□ -2.18
VPS13AQ96RL7 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC1.44□□□□□ -2.18
VPS13AQ96RL7 OFD1P12Y-201ENST00000427963 1207 ntBASIC1.44□□□□□ -2.18
VPS13AQ96RL7 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC1.44□□□□□ -2.18
VPS13AQ96RL7 FABP5P6-201ENST00000510588 409 ntBASIC1.44□□□□□ -2.18
VPS13AQ96RL7 CA1-215ENST00000522389 551 ntTSL 3 BASIC1.44□□□□□ -2.18
VPS13AQ96RL7 RFC1-217ENST00000639695 867 ntTSL 5 BASIC1.44□□□□□ -2.18
VPS13AQ96RL7 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC1.44□□□□□ -2.18
VPS13AQ96RL7 AC092881.1-201ENST00000638218 2733 ntBASIC1.44□□□□□ -2.18
VPS13AQ96RL7 MCTS2P-201ENST00000394552 546 ntBASIC1.43□□□□□ -2.18
VPS13AQ96RL7 AL157827.1-201ENST00000447622 132 ntBASIC1.43□□□□□ -2.18
VPS13AQ96RL7 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
VPS13AQ96RL7 AC091152.2-201ENST00000591628 2569 ntBASIC1.43□□□□□ -2.18
VPS13AQ96RL7 SNORA67.6-201ENST00000391093 99 ntBASIC1.43□□□□□ -2.18
VPS13AQ96RL7 AL445669.1-201ENST00000426743 755 ntBASIC1.43□□□□□ -2.18
VPS13AQ96RL7 RPL31P41-201ENST00000477967 372 ntBASIC1.43□□□□□ -2.18
VPS13AQ96RL7 AC087190.1-201ENST00000484462 480 ntBASIC1.43□□□□□ -2.18
VPS13AQ96RL7 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC1.43□□□□□ -2.18
VPS13AQ96RL7 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC1.43□□□□□ -2.18
VPS13AQ96RL7 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
VPS13AQ96RL7 RNU6-984P-201ENST00000363236 109 ntBASIC1.43□□□□□ -2.18
VPS13AQ96RL7 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC1.43□□□□□ -2.18
VPS13AQ96RL7 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC1.43□□□□□ -2.18
VPS13AQ96RL7 MTND1P23-201ENST00000416931 372 ntBASIC1.43□□□□□ -2.18
VPS13AQ96RL7 AIMP1P2-201ENST00000425294 312 ntBASIC1.43□□□□□ -2.18
VPS13AQ96RL7 AC079776.3-201ENST00000450665 370 ntBASIC1.43□□□□□ -2.18
VPS13AQ96RL7 SNORA31.24-201ENST00000517232 57 ntBASIC1.43□□□□□ -2.18
VPS13AQ96RL7 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC1.43□□□□□ -2.18
VPS13AQ96RL7 AC022513.1-201ENST00000624512 117 ntBASIC1.43□□□□□ -2.18
VPS13AQ96RL7 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.43□□□□□ -2.18
VPS13AQ96RL7 AL121594.5-201ENST00000631724 573 ntBASIC1.43□□□□□ -2.18
VPS13AQ96RL7 METTL21EP-201ENST00000298105 713 ntBASIC1.42□□□□□ -2.18
VPS13AQ96RL7 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC1.42□□□□□ -2.18
VPS13AQ96RL7 GTF2IP7-202ENST00000436677 309 ntBASIC1.42□□□□□ -2.18
VPS13AQ96RL7 AC090819.1-201ENST00000523800 1111 ntBASIC1.42□□□□□ -2.18
VPS13AQ96RL7 VN1R79P-201ENST00000593540 513 ntBASIC1.42□□□□□ -2.18
VPS13AQ96RL7 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC1.42□□□□□ -2.18
VPS13AQ96RL7 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC1.42□□□□□ -2.18
VPS13AQ96RL7 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC1.42□□□□□ -2.18
VPS13AQ96RL7 U8.9-201ENST00000365667 134 ntBASIC1.42□□□□□ -2.18
VPS13AQ96RL7 RPL19P1-201ENST00000411635 428 ntBASIC1.42□□□□□ -2.18
VPS13AQ96RL7 DUXAP8-207ENST00000456786 622 ntBASIC1.42□□□□□ -2.18
VPS13AQ96RL7 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC1.42□□□□□ -2.18
VPS13AQ96RL7 RPS26P24-201ENST00000497656 331 ntBASIC1.42□□□□□ -2.18
VPS13AQ96RL7 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
VPS13AQ96RL7 AC098934.3-201ENST00000430450 190 ntBASIC1.41□□□□□ -2.18
VPS13AQ96RL7 RPL35AP22-201ENST00000436855 335 ntBASIC1.41□□□□□ -2.18
VPS13AQ96RL7 AL583843.1-201ENST00000456070 346 ntBASIC1.41□□□□□ -2.18
VPS13AQ96RL7 AC004223.1-201ENST00000479840 271 ntBASIC1.41□□□□□ -2.18
VPS13AQ96RL7 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC1.41□□□□□ -2.18
VPS13AQ96RL7 SETP7-201ENST00000552169 453 ntBASIC1.41□□□□□ -2.18
VPS13AQ96RL7 HMGB3P26-201ENST00000560051 582 ntBASIC1.41□□□□□ -2.18
VPS13AQ96RL7 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.41□□□□□ -2.18
VPS13AQ96RL7 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC1.41□□□□□ -2.18
VPS13AQ96RL7 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC1.41□□□□□ -2.18
VPS13AQ96RL7 AC012078.1-201ENST00000405035 1646 ntBASIC1.41□□□□□ -2.18
VPS13AQ96RL7 MTCO1P48-201ENST00000448024 1096 ntBASIC1.41□□□□□ -2.18
VPS13AQ96RL7 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC1.41□□□□□ -2.18
VPS13AQ96RL7 DYNLL1P5-201ENST00000467158 270 ntBASIC1.41□□□□□ -2.18
VPS13AQ96RL7 NDUFB4P9-201ENST00000511646 388 ntBASIC1.41□□□□□ -2.18
VPS13AQ96RL7 AC008837.2-201ENST00000513076 418 ntBASIC1.41□□□□□ -2.18
VPS13AQ96RL7 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC1.41□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 121.1 ms