Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
PTCHD1Q96NR3 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC4.63□□□□□ -1.67
PTCHD1Q96NR3 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
PTCHD1Q96NR3 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
PTCHD1Q96NR3 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
PTCHD1Q96NR3 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
PTCHD1Q96NR3 RNU6-263P-201ENST00000363811 107 ntBASIC4.63□□□□□ -1.67
PTCHD1Q96NR3 RN7SKP103-201ENST00000363848 320 ntBASIC4.63□□□□□ -1.67
PTCHD1Q96NR3 AC117470.1-201ENST00000381974 330 ntBASIC4.63□□□□□ -1.67
PTCHD1Q96NR3 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
PTCHD1Q96NR3 AL133270.1-201ENST00000402635 279 ntBASIC4.63□□□□□ -1.67
PTCHD1Q96NR3 AC104333.2-201ENST00000422630 192 ntBASIC4.63□□□□□ -1.67
PTCHD1Q96NR3 PDSS1P1-201ENST00000422953 1114 ntBASIC4.63□□□□□ -1.67
PTCHD1Q96NR3 FABP7P2-201ENST00000429946 379 ntBASIC4.63□□□□□ -1.67
PTCHD1Q96NR3 SNAP23P1-201ENST00000433229 246 ntBASIC4.63□□□□□ -1.67
PTCHD1Q96NR3 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC4.63□□□□□ -1.67
PTCHD1Q96NR3 AL772161.1-201ENST00000439130 476 ntBASIC4.63□□□□□ -1.67
PTCHD1Q96NR3 MRPL48P1-201ENST00000445390 636 ntBASIC4.63□□□□□ -1.67
PTCHD1Q96NR3 MIR2053-201ENST00000459295 91 ntBASIC4.63□□□□□ -1.67
PTCHD1Q96NR3 RPS3AP41-201ENST00000462701 778 ntBASIC4.63□□□□□ -1.67
PTCHD1Q96NR3 AP002812.1-201ENST00000495378 474 ntBASIC4.63□□□□□ -1.67
PTCHD1Q96NR3 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC4.63□□□□□ -1.67
PTCHD1Q96NR3 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC4.63□□□□□ -1.67
PTCHD1Q96NR3 TBCAP3-201ENST00000512475 312 ntBASIC4.63□□□□□ -1.67
PTCHD1Q96NR3 RNU6-976P-201ENST00000516086 111 ntBASIC4.63□□□□□ -1.67
PTCHD1Q96NR3 RNU6-1213P-201ENST00000517075 94 ntBASIC4.63□□□□□ -1.67
PTCHD1Q96NR3 RN7SKP234-201ENST00000517173 224 ntBASIC4.63□□□□□ -1.67
PTCHD1Q96NR3 RN7SKP295-201ENST00000517264 153 ntBASIC4.63□□□□□ -1.67
PTCHD1Q96NR3 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC4.63□□□□□ -1.67
PTCHD1Q96NR3 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.63□□□□□ -1.67
PTCHD1Q96NR3 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC4.63□□□□□ -1.67
PTCHD1Q96NR3 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
PTCHD1Q96NR3 AC093012.1-202ENST00000549403 582 ntBASIC4.63□□□□□ -1.67
PTCHD1Q96NR3 AC090115.3-201ENST00000553218 849 ntBASIC4.63□□□□□ -1.67
PTCHD1Q96NR3 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC4.63□□□□□ -1.67
PTCHD1Q96NR3 HNRNPCP4-201ENST00000571636 900 ntBASIC4.63□□□□□ -1.67
PTCHD1Q96NR3 MIR6130-201ENST00000619419 109 ntBASIC4.63□□□□□ -1.67
PTCHD1Q96NR3 AC243312.2-201ENST00000623340 601 ntBASIC4.63□□□□□ -1.67
PTCHD1Q96NR3 AL049555.1-201ENST00000562834 1933 ntBASIC4.63□□□□□ -1.67
PTCHD1Q96NR3 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.63□□□□□ -1.67
PTCHD1Q96NR3 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
PTCHD1Q96NR3 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
PTCHD1Q96NR3 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC4.63□□□□□ -1.67
PTCHD1Q96NR3 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.62□□□□□ -1.67
PTCHD1Q96NR3 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC4.62□□□□□ -1.67
PTCHD1Q96NR3 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
PTCHD1Q96NR3 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
PTCHD1Q96NR3 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.62□□□□□ -1.67
PTCHD1Q96NR3 AL672167.1-205ENST00000641112 3080 ntBASIC4.62□□□□□ -1.67
PTCHD1Q96NR3 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
PTCHD1Q96NR3 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
PTCHD1Q96NR3 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
PTCHD1Q96NR3 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.62□□□□□ -1.67
PTCHD1Q96NR3 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.62□□□□□ -1.67
PTCHD1Q96NR3 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.62□□□□□ -1.67
PTCHD1Q96NR3 Y_RNA.399-201ENST00000383955 105 ntBASIC4.62□□□□□ -1.67
PTCHD1Q96NR3 RNU6-574P-201ENST00000384265 107 ntBASIC4.62□□□□□ -1.67
PTCHD1Q96NR3 RNU6-196P-201ENST00000384315 107 ntBASIC4.62□□□□□ -1.67
PTCHD1Q96NR3 RNU6-1106P-201ENST00000390845 107 ntBASIC4.62□□□□□ -1.67
PTCHD1Q96NR3 SNORA16.2-201ENST00000390991 127 ntBASIC4.62□□□□□ -1.67
PTCHD1Q96NR3 NDUFS5P1-201ENST00000405668 289 ntBASIC4.62□□□□□ -1.67
PTCHD1Q96NR3 Y_RNA.605-201ENST00000410577 105 ntBASIC4.62□□□□□ -1.67
PTCHD1Q96NR3 Y_RNA.646-201ENST00000410980 101 ntBASIC4.62□□□□□ -1.67
PTCHD1Q96NR3 RPS23P10-201ENST00000416185 486 ntBASIC4.62□□□□□ -1.67
PTCHD1Q96NR3 ATG3P1-201ENST00000419507 911 ntBASIC4.62□□□□□ -1.67
PTCHD1Q96NR3 AL137014.1-201ENST00000420490 1226 ntBASIC4.62□□□□□ -1.67
PTCHD1Q96NR3 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.62□□□□□ -1.67
PTCHD1Q96NR3 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC4.62□□□□□ -1.67
PTCHD1Q96NR3 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC4.62□□□□□ -1.67
PTCHD1Q96NR3 RPS27AP12-201ENST00000429552 465 ntBASIC4.62□□□□□ -1.67
PTCHD1Q96NR3 TPT1P13-201ENST00000449760 499 ntBASIC4.62□□□□□ -1.67
PTCHD1Q96NR3 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.62□□□□□ -1.67
PTCHD1Q96NR3 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC4.62□□□□□ -1.67
PTCHD1Q96NR3 RPS23P1-201ENST00000491662 432 ntBASIC4.62□□□□□ -1.67
PTCHD1Q96NR3 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.62□□□□□ -1.67
PTCHD1Q96NR3 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC4.62□□□□□ -1.67
PTCHD1Q96NR3 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.62□□□□□ -1.67
PTCHD1Q96NR3 AC105031.1-201ENST00000518550 476 ntBASIC4.62□□□□□ -1.67
PTCHD1Q96NR3 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.62□□□□□ -1.67
PTCHD1Q96NR3 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.62□□□□□ -1.67
PTCHD1Q96NR3 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.62□□□□□ -1.67
PTCHD1Q96NR3 MIR3941-201ENST00000582572 103 ntBASIC4.62□□□□□ -1.67
PTCHD1Q96NR3 AC067852.4-201ENST00000590314 478 ntBASIC4.62□□□□□ -1.67
PTCHD1Q96NR3 AL158032.1-201ENST00000605401 106 ntBASIC4.62□□□□□ -1.67
PTCHD1Q96NR3 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC4.62□□□□□ -1.67
PTCHD1Q96NR3 AL049539.1-201ENST00000611964 459 ntBASIC4.62□□□□□ -1.67
PTCHD1Q96NR3 FAM157A-202ENST00000615155 405 ntBASIC4.62□□□□□ -1.67
PTCHD1Q96NR3 AC010378.1-201ENST00000619270 362 ntBASIC4.62□□□□□ -1.67
PTCHD1Q96NR3 BX005214.3-202ENST00000619809 325 ntBASIC4.62□□□□□ -1.67
PTCHD1Q96NR3 AC087385.3-201ENST00000620477 187 ntBASIC4.62□□□□□ -1.67
PTCHD1Q96NR3 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.62□□□□□ -1.67
PTCHD1Q96NR3 TTK-211ENST00000627129 240 ntTSL 5 BASIC4.62□□□□□ -1.67
PTCHD1Q96NR3 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC4.62□□□□□ -1.67
PTCHD1Q96NR3 AL669831.3-213ENST00000636676 183 ntBASIC4.62□□□□□ -1.67
PTCHD1Q96NR3 AC073869.10-201ENST00000642016 354 ntBASIC4.62□□□□□ -1.67
PTCHD1Q96NR3 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
PTCHD1Q96NR3 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
PTCHD1Q96NR3 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
PTCHD1Q96NR3 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
PTCHD1Q96NR3 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 137.5 ms