Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 AC044913.1-201ENST00000557200 430 ntBASIC2.66□□□□□ -1.98
C9orf72Q96LT7 MIR4666A-201ENST00000580160 79 ntBASIC2.66□□□□□ -1.98
C9orf72Q96LT7 AL031176.1-201ENST00000604554 466 ntBASIC2.66□□□□□ -1.98
C9orf72Q96LT7 AC097504.2-201ENST00000608088 454 ntBASIC2.66□□□□□ -1.98
C9orf72Q96LT7 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC2.66□□□□□ -1.98
C9orf72Q96LT7 AC005858.4-201ENST00000623191 700 ntBASIC2.66□□□□□ -1.98
C9orf72Q96LT7 TAB3P1-202ENST00000452645 1634 ntBASIC2.66□□□□□ -1.98
C9orf72Q96LT7 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
C9orf72Q96LT7 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.65□□□□□ -1.98
C9orf72Q96LT7 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC2.65□□□□□ -1.99
C9orf72Q96LT7 RPL22P22-201ENST00000395439 379 ntBASIC2.65□□□□□ -1.99
C9orf72Q96LT7 RPS4XP8-201ENST00000402039 771 ntBASIC2.65□□□□□ -1.99
C9orf72Q96LT7 USP9YP20-201ENST00000419224 558 ntBASIC2.65□□□□□ -1.99
C9orf72Q96LT7 UBE2D3P3-201ENST00000426992 425 ntBASIC2.65□□□□□ -1.99
C9orf72Q96LT7 AC092573.2-201ENST00000434546 243 ntBASIC2.65□□□□□ -1.99
C9orf72Q96LT7 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC2.65□□□□□ -1.99
C9orf72Q96LT7 AC011816.1-201ENST00000441346 546 ntBASIC2.65□□□□□ -1.99
C9orf72Q96LT7 AC092757.1-201ENST00000467293 467 ntBASIC2.65□□□□□ -1.99
C9orf72Q96LT7 RPL31P60-201ENST00000478450 367 ntBASIC2.65□□□□□ -1.99
C9orf72Q96LT7 MTCO2P9-201ENST00000503214 694 ntBASIC2.65□□□□□ -1.99
C9orf72Q96LT7 BOLA3P3-201ENST00000505182 232 ntBASIC2.65□□□□□ -1.99
C9orf72Q96LT7 SEM1P1-201ENST00000506694 209 ntBASIC2.65□□□□□ -1.99
C9orf72Q96LT7 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.65□□□□□ -1.99
C9orf72Q96LT7 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC2.65□□□□□ -1.99
C9orf72Q96LT7 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC2.65□□□□□ -1.99
C9orf72Q96LT7 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
C9orf72Q96LT7 CR383656.7-201ENST00000548164 174 ntBASIC2.65□□□□□ -1.99
C9orf72Q96LT7 SETP7-201ENST00000552169 453 ntBASIC2.65□□□□□ -1.99
C9orf72Q96LT7 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC2.65□□□□□ -1.99
C9orf72Q96LT7 AC011260.1-201ENST00000578420 472 ntBASIC2.65□□□□□ -1.99
C9orf72Q96LT7 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC2.65□□□□□ -1.99
C9orf72Q96LT7 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC2.65□□□□□ -1.99
C9orf72Q96LT7 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
C9orf72Q96LT7 NRBF2P5-201ENST00000603087 788 ntBASIC2.65□□□□□ -1.99
C9orf72Q96LT7 AC013444.2-201ENST00000603317 787 ntBASIC2.65□□□□□ -1.99
C9orf72Q96LT7 RPL23AP92-201ENST00000603609 255 ntBASIC2.65□□□□□ -1.99
C9orf72Q96LT7 AC091946.2-201ENST00000606105 291 ntBASIC2.65□□□□□ -1.99
C9orf72Q96LT7 AC078880.5-201ENST00000617845 421 ntBASIC2.65□□□□□ -1.99
C9orf72Q96LT7 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC2.65□□□□□ -1.99
C9orf72Q96LT7 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.65□□□□□ -1.99
C9orf72Q96LT7 OR4G11P-202ENST00000642116 1414 ntBASIC2.65□□□□□ -1.99
C9orf72Q96LT7 SUCLA2P2-201ENST00000417269 1309 ntBASIC2.65□□□□□ -1.99
C9orf72Q96LT7 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.64□□□□□ -1.99
C9orf72Q96LT7 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.64□□□□□ -1.99
C9orf72Q96LT7 HMGB1P5-201ENST00000255320 642 ntBASIC2.64□□□□□ -1.99
C9orf72Q96LT7 MIR449A-201ENST00000362113 91 ntBASIC2.64□□□□□ -1.99
C9orf72Q96LT7 RNU6-859P-201ENST00000362728 107 ntBASIC2.64□□□□□ -1.99
C9orf72Q96LT7 MIR196B-201ENST00000384852 84 ntBASIC2.64□□□□□ -1.99
C9orf72Q96LT7 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.64□□□□□ -1.99
C9orf72Q96LT7 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC2.64□□□□□ -1.99
C9orf72Q96LT7 RPL27AP8-201ENST00000424277 446 ntBASIC2.64□□□□□ -1.99
C9orf72Q96LT7 AC024082.2-201ENST00000434771 238 ntBASIC2.64□□□□□ -1.99
C9orf72Q96LT7 AC092393.1-201ENST00000439625 742 ntBASIC2.64□□□□□ -1.99
C9orf72Q96LT7 AC010099.1-201ENST00000455434 375 ntBASIC2.64□□□□□ -1.99
C9orf72Q96LT7 AC104164.3-201ENST00000467363 1258 ntBASIC2.64□□□□□ -1.99
C9orf72Q96LT7 COX7A2P2-201ENST00000505291 250 ntBASIC2.64□□□□□ -1.99
C9orf72Q96LT7 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC2.64□□□□□ -1.99
C9orf72Q96LT7 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
C9orf72Q96LT7 AC128657.1-201ENST00000549459 145 ntBASIC2.64□□□□□ -1.99
C9orf72Q96LT7 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.64□□□□□ -1.99
C9orf72Q96LT7 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC2.64□□□□□ -1.99
C9orf72Q96LT7 AC005776.1-201ENST00000603164 290 ntBASIC2.64□□□□□ -1.99
C9orf72Q96LT7 AL021368.1-201ENST00000607490 540 ntBASIC2.64□□□□□ -1.99
C9orf72Q96LT7 AC027309.3-201ENST00000623419 351 ntBASIC2.64□□□□□ -1.99
C9orf72Q96LT7 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC2.64□□□□□ -1.99
C9orf72Q96LT7 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
C9orf72Q96LT7 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
C9orf72Q96LT7 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
C9orf72Q96LT7 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.63□□□□□ -1.99
C9orf72Q96LT7 RNU5B-1-201ENST00000363286 116 ntBASIC2.63□□□□□ -1.99
C9orf72Q96LT7 RNU6-1180P-201ENST00000364935 107 ntBASIC2.63□□□□□ -1.99
C9orf72Q96LT7 RNU1-100P-201ENST00000365255 165 ntBASIC2.63□□□□□ -1.99
C9orf72Q96LT7 RNU6-207P-201ENST00000384137 107 ntBASIC2.63□□□□□ -1.99
C9orf72Q96LT7 MIR135A2-201ENST00000384854 100 ntBASIC2.63□□□□□ -1.99
C9orf72Q96LT7 MIR34A-201ENST00000385130 110 ntBASIC2.63□□□□□ -1.99
C9orf72Q96LT7 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
C9orf72Q96LT7 RNA5SP80-201ENST00000410475 111 ntBASIC2.63□□□□□ -1.99
C9orf72Q96LT7 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.63□□□□□ -1.99
C9orf72Q96LT7 ARL5AP4-201ENST00000430731 512 ntBASIC2.63□□□□□ -1.99
C9orf72Q96LT7 LSM1P1-201ENST00000438629 273 ntBASIC2.63□□□□□ -1.99
C9orf72Q96LT7 AP000936.2-201ENST00000447151 681 ntBASIC2.63□□□□□ -1.99
C9orf72Q96LT7 SETP11-201ENST00000473027 690 ntBASIC2.63□□□□□ -1.99
C9orf72Q96LT7 AC126182.1-201ENST00000478134 357 ntBASIC2.63□□□□□ -1.99
C9orf72Q96LT7 NAA50-206ENST00000493454 964 ntTSL 2 BASIC2.63□□□□□ -1.99
C9orf72Q96LT7 AC118465.1-201ENST00000513820 1271 ntBASIC2.63□□□□□ -1.99
C9orf72Q96LT7 MTND5P4-201ENST00000514978 288 ntBASIC2.63□□□□□ -1.99
C9orf72Q96LT7 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC2.63□□□□□ -1.99
C9orf72Q96LT7 RNA5SP282-201ENST00000516355 108 ntBASIC2.63□□□□□ -1.99
C9orf72Q96LT7 snoZ278.1-201ENST00000517059 112 ntBASIC2.63□□□□□ -1.99
C9orf72Q96LT7 SNORA31.21-201ENST00000517180 77 ntBASIC2.63□□□□□ -1.99
C9orf72Q96LT7 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC2.63□□□□□ -1.99
C9orf72Q96LT7 AC087272.1-201ENST00000523624 533 ntBASIC2.63□□□□□ -1.99
C9orf72Q96LT7 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.63□□□□□ -1.99
C9orf72Q96LT7 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
C9orf72Q96LT7 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC2.63□□□□□ -1.99
C9orf72Q96LT7 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC2.63□□□□□ -1.99
C9orf72Q96LT7 MIR3609-201ENST00000582661 80 ntBASIC2.63□□□□□ -1.99
C9orf72Q96LT7 AC015688.2-201ENST00000584523 262 ntBASIC2.63□□□□□ -1.99
C9orf72Q96LT7 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC2.63□□□□□ -1.99
C9orf72Q96LT7 AC060766.3-201ENST00000591442 263 ntBASIC2.63□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 112.2 ms