Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
VPS50Q96JG6 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.01□□□□□ -1.77
VPS50Q96JG6 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
VPS50Q96JG6 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC4.01□□□□□ -1.77
VPS50Q96JG6 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.01□□□□□ -1.77
VPS50Q96JG6 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
VPS50Q96JG6 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC4.01□□□□□ -1.77
VPS50Q96JG6 SNORA20.2-201ENST00000383922 131 ntBASIC4.01□□□□□ -1.77
VPS50Q96JG6 MIR1179-201ENST00000408703 91 ntBASIC4.01□□□□□ -1.77
VPS50Q96JG6 SNORA3C-201ENST00000408792 125 ntBASIC4.01□□□□□ -1.77
VPS50Q96JG6 RNU2-8P-201ENST00000410727 190 ntBASIC4.01□□□□□ -1.77
VPS50Q96JG6 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC4.01□□□□□ -1.77
VPS50Q96JG6 EI24P1-201ENST00000416584 867 ntBASIC4.01□□□□□ -1.77
VPS50Q96JG6 AL157831.1-201ENST00000426134 473 ntBASIC4.01□□□□□ -1.77
VPS50Q96JG6 AC119618.1-201ENST00000434191 222 ntBASIC4.01□□□□□ -1.77
VPS50Q96JG6 AC002486.1-201ENST00000435098 391 ntBASIC4.01□□□□□ -1.77
VPS50Q96JG6 TIMM9P1-201ENST00000436122 256 ntBASIC4.01□□□□□ -1.77
VPS50Q96JG6 RPL23AP89-201ENST00000439324 255 ntBASIC4.01□□□□□ -1.77
VPS50Q96JG6 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC4.01□□□□□ -1.77
VPS50Q96JG6 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC4.01□□□□□ -1.77
VPS50Q96JG6 HMGN2P7-201ENST00000456186 273 ntBASIC4.01□□□□□ -1.77
VPS50Q96JG6 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC4.01□□□□□ -1.77
VPS50Q96JG6 RN7SL132P-201ENST00000478131 296 ntBASIC4.01□□□□□ -1.77
VPS50Q96JG6 RPL23AP41-201ENST00000484754 458 ntBASIC4.01□□□□□ -1.77
VPS50Q96JG6 MTAPP1-201ENST00000489154 819 ntBASIC4.01□□□□□ -1.77
VPS50Q96JG6 AC007182.2-201ENST00000489251 402 ntBASIC4.01□□□□□ -1.77
VPS50Q96JG6 RPS27AP13-201ENST00000498403 237 ntBASIC4.01□□□□□ -1.77
VPS50Q96JG6 FAM92A1P2-202ENST00000504766 877 ntBASIC4.01□□□□□ -1.77
VPS50Q96JG6 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.01□□□□□ -1.77
VPS50Q96JG6 AC099522.1-202ENST00000514718 367 ntBASIC4.01□□□□□ -1.77
VPS50Q96JG6 Y_RNA.704-201ENST00000516851 102 ntBASIC4.01□□□□□ -1.77
VPS50Q96JG6 RNU6-798P-201ENST00000516912 103 ntBASIC4.01□□□□□ -1.77
VPS50Q96JG6 AC105233.3-201ENST00000531125 744 ntBASIC4.01□□□□□ -1.77
VPS50Q96JG6 AL133271.1-201ENST00000538229 291 ntBASIC4.01□□□□□ -1.77
VPS50Q96JG6 ARL6IP1P1-201ENST00000545836 610 ntBASIC4.01□□□□□ -1.77
VPS50Q96JG6 OR4T1P-201ENST00000554933 911 ntBASIC4.01□□□□□ -1.77
VPS50Q96JG6 AC025884.1-201ENST00000556034 378 ntBASIC4.01□□□□□ -1.77
VPS50Q96JG6 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.01□□□□□ -1.77
VPS50Q96JG6 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC4.01□□□□□ -1.77
VPS50Q96JG6 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC4.01□□□□□ -1.77
VPS50Q96JG6 VN1R85P-201ENST00000601587 426 ntBASIC4.01□□□□□ -1.77
VPS50Q96JG6 HMGN2P28-201ENST00000606102 262 ntBASIC4.01□□□□□ -1.77
VPS50Q96JG6 AC064801.1-201ENST00000612025 407 ntBASIC4.01□□□□□ -1.77
VPS50Q96JG6 AL391261.4-201ENST00000616012 481 ntBASIC4.01□□□□□ -1.77
VPS50Q96JG6 AC068831.8-201ENST00000620171 435 ntBASIC4.01□□□□□ -1.77
VPS50Q96JG6 MIR7702-201ENST00000621931 59 ntBASIC4.01□□□□□ -1.77
VPS50Q96JG6 SRP54-214ENST00000630962 162 ntTSL 5 BASIC4.01□□□□□ -1.77
VPS50Q96JG6 AC244205.2-202ENST00000635781 342 ntBASIC4.01□□□□□ -1.77
VPS50Q96JG6 MIR3688-2-201ENST00000636963 87 ntBASIC4.01□□□□□ -1.77
VPS50Q96JG6 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
VPS50Q96JG6 BDP1P-201ENST00000582658 1990 ntBASIC4.01□□□□□ -1.77
VPS50Q96JG6 AL133383.2-201ENST00000622958 2336 ntBASIC4.01□□□□□ -1.77
VPS50Q96JG6 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC4.01□□□□□ -1.77
VPS50Q96JG6 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.01□□□□□ -1.77
VPS50Q96JG6 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
VPS50Q96JG6 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC4□□□□□ -1.77
VPS50Q96JG6 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
VPS50Q96JG6 TNPO1P3-201ENST00000436471 2662 ntBASIC4□□□□□ -1.77
VPS50Q96JG6 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
VPS50Q96JG6 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
VPS50Q96JG6 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC4□□□□□ -1.77
VPS50Q96JG6 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC4□□□□□ -1.77
VPS50Q96JG6 AL138713.1-201ENST00000624026 2130 ntBASIC4□□□□□ -1.77
VPS50Q96JG6 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC4□□□□□ -1.77
VPS50Q96JG6 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
VPS50Q96JG6 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC4□□□□□ -1.77
VPS50Q96JG6 Y_RNA.159-201ENST00000363674 87 ntBASIC4□□□□□ -1.77
VPS50Q96JG6 RNU6-169P-201ENST00000365336 107 ntBASIC4□□□□□ -1.77
VPS50Q96JG6 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC4□□□□□ -1.77
VPS50Q96JG6 Y_RNA.450-201ENST00000384198 113 ntBASIC4□□□□□ -1.77
VPS50Q96JG6 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC4□□□□□ -1.77
VPS50Q96JG6 AL078595.1-201ENST00000404458 226 ntBASIC4□□□□□ -1.77
VPS50Q96JG6 AL445189.1-201ENST00000405722 338 ntBASIC4□□□□□ -1.77
VPS50Q96JG6 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC4□□□□□ -1.77
VPS50Q96JG6 AL353193.1-201ENST00000421444 268 ntBASIC4□□□□□ -1.77
VPS50Q96JG6 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC4□□□□□ -1.77
VPS50Q96JG6 AC122718.1-201ENST00000439448 744 ntBASIC4□□□□□ -1.77
VPS50Q96JG6 MTATP6P23-201ENST00000440153 476 ntBASIC4□□□□□ -1.77
VPS50Q96JG6 RPL21P89-201ENST00000444021 467 ntBASIC4□□□□□ -1.77
VPS50Q96JG6 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4□□□□□ -1.77
VPS50Q96JG6 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC4□□□□□ -1.77
VPS50Q96JG6 CEACAMP4-201ENST00000457676 421 ntBASIC4□□□□□ -1.77
VPS50Q96JG6 FAM133DP-201ENST00000464802 691 ntBASIC4□□□□□ -1.77
VPS50Q96JG6 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4□□□□□ -1.77
VPS50Q96JG6 AC007537.2-201ENST00000472093 511 ntBASIC4□□□□□ -1.77
VPS50Q96JG6 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC4□□□□□ -1.77
VPS50Q96JG6 ST13P14-201ENST00000474095 734 ntBASIC4□□□□□ -1.77
VPS50Q96JG6 AC041039.1-201ENST00000485656 536 ntBASIC4□□□□□ -1.77
VPS50Q96JG6 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC4□□□□□ -1.77
VPS50Q96JG6 AC010342.1-201ENST00000514047 877 ntBASIC4□□□□□ -1.77
VPS50Q96JG6 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC4□□□□□ -1.77
VPS50Q96JG6 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC4□□□□□ -1.77
VPS50Q96JG6 OR5D17P-201ENST00000531492 978 ntBASIC4□□□□□ -1.77
VPS50Q96JG6 CR383656.7-201ENST00000548164 174 ntBASIC4□□□□□ -1.77
VPS50Q96JG6 RPS3AP4-201ENST00000555161 764 ntBASIC4□□□□□ -1.77
VPS50Q96JG6 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC4□□□□□ -1.77
VPS50Q96JG6 RNU4-89P-201ENST00000607443 133 ntBASIC4□□□□□ -1.77
VPS50Q96JG6 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC4□□□□□ -1.77
VPS50Q96JG6 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC4□□□□□ -1.77
VPS50Q96JG6 U73479.1-201ENST00000618062 168 ntBASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 172.6 ms