Protein–RNA interactions for Protein: Q96HJ5

MS4A3, Membrane-spanning 4-domains subfamily A member 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A3Q96HJ5 RNU6-893P-201ENST00000458841 100 ntBASIC6.19□□□□□ -1.42
MS4A3Q96HJ5 RPL31P41-201ENST00000477967 372 ntBASIC6.19□□□□□ -1.42
MS4A3Q96HJ5 RN7SL797P-201ENST00000486314 297 ntBASIC6.19□□□□□ -1.42
MS4A3Q96HJ5 AC091826.1-201ENST00000514065 313 ntBASIC6.19□□□□□ -1.42
MS4A3Q96HJ5 RNA5SP518-201ENST00000515957 119 ntBASIC6.19□□□□□ -1.42
MS4A3Q96HJ5 AC107952.1-201ENST00000524200 376 ntBASIC6.19□□□□□ -1.42
MS4A3Q96HJ5 AP004609.2-201ENST00000532177 190 ntBASIC6.19□□□□□ -1.42
MS4A3Q96HJ5 AC103855.4-201ENST00000533158 265 ntBASIC6.19□□□□□ -1.42
MS4A3Q96HJ5 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC6.19□□□□□ -1.42
MS4A3Q96HJ5 AC060780.2-201ENST00000589047 198 ntBASIC6.19□□□□□ -1.42
MS4A3Q96HJ5 AC092960.1-201ENST00000604762 351 ntBASIC6.19□□□□□ -1.42
MS4A3Q96HJ5 AC019159.1-201ENST00000605094 187 ntBASIC6.19□□□□□ -1.42
MS4A3Q96HJ5 AC099778.2-201ENST00000610904 211 ntBASIC6.19□□□□□ -1.42
MS4A3Q96HJ5 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC6.19□□□□□ -1.42
MS4A3Q96HJ5 MIR4662A-201ENST00000637499 67 ntBASIC6.19□□□□□ -1.42
MS4A3Q96HJ5 SOX6-201ENST00000316399 8808 ntAPPRIS P3 TSL 5 BASIC6.19□□□□□ -1.42
MS4A3Q96HJ5 LEKR1-201ENST00000356539 2572 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
MS4A3Q96HJ5 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC6.19□□□□□ -1.42
MS4A3Q96HJ5 ZC3H11B-201ENST00000367211 2994 ntAPPRIS P5 TSL 5 BASIC6.19□□□□□ -1.42
MS4A3Q96HJ5 VIRMA-202ENST00000421249 3924 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
MS4A3Q96HJ5 GAPVD1-203ENST00000312123 4320 ntAPPRIS ALT1 TSL 1 (best) BASIC6.19□□□□□ -1.42
MS4A3Q96HJ5 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
MS4A3Q96HJ5 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC6.19□□□□□ -1.42
MS4A3Q96HJ5 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
MS4A3Q96HJ5 MEF2C-254ENST00000637732 3347 ntTSL 5 BASIC6.19□□□□□ -1.42
MS4A3Q96HJ5 LRRC37A16P-202ENST00000586022 3725 ntBASIC6.19□□□□□ -1.42
MS4A3Q96HJ5 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
MS4A3Q96HJ5 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
MS4A3Q96HJ5 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
MS4A3Q96HJ5 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC6.18□□□□□ -1.42
MS4A3Q96HJ5 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
MS4A3Q96HJ5 FBXO7-202ENST00000397426 1888 ntTSL 2 BASIC6.18□□□□□ -1.42
MS4A3Q96HJ5 RBBP4-202ENST00000373493 7943 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
MS4A3Q96HJ5 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
MS4A3Q96HJ5 ABI1-207ENST00000376142 3576 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
MS4A3Q96HJ5 SLMAP-202ENST00000295952 4420 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
MS4A3Q96HJ5 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC6.18□□□□□ -1.42
MS4A3Q96HJ5 Y_RNA.52-201ENST00000362760 96 ntBASIC6.18□□□□□ -1.42
MS4A3Q96HJ5 RNA5SP35-201ENST00000391257 129 ntBASIC6.18□□□□□ -1.42
MS4A3Q96HJ5 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC6.18□□□□□ -1.42
MS4A3Q96HJ5 AL389915.2-201ENST00000454576 441 ntBASIC6.18□□□□□ -1.42
MS4A3Q96HJ5 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC6.18□□□□□ -1.42
MS4A3Q96HJ5 snoU13.3-201ENST00000459441 104 ntBASIC6.18□□□□□ -1.42
MS4A3Q96HJ5 AC079089.1-203ENST00000533300 431 ntTSL 5 BASIC6.18□□□□□ -1.42
MS4A3Q96HJ5 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC6.18□□□□□ -1.42
MS4A3Q96HJ5 AL031846.1-201ENST00000560933 314 ntBASIC6.18□□□□□ -1.42
MS4A3Q96HJ5 COX6CP16-201ENST00000603667 216 ntBASIC6.18□□□□□ -1.42
MS4A3Q96HJ5 AL359198.2-201ENST00000611836 194 ntBASIC6.18□□□□□ -1.42
MS4A3Q96HJ5 AC015914.2-201ENST00000618167 288 ntBASIC6.18□□□□□ -1.42
MS4A3Q96HJ5 DTHD1-206ENST00000639862 3819 ntTSL 5 BASIC6.18□□□□□ -1.42
MS4A3Q96HJ5 ARID5B-201ENST00000279873 7891 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
MS4A3Q96HJ5 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
MS4A3Q96HJ5 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
MS4A3Q96HJ5 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
MS4A3Q96HJ5 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
MS4A3Q96HJ5 KDELC2-202ENST00000434945 4374 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
MS4A3Q96HJ5 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC6.18□□□□□ -1.42
MS4A3Q96HJ5 AC025470.1-201ENST00000510053 2032 ntBASIC6.18□□□□□ -1.42
MS4A3Q96HJ5 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC6.18□□□□□ -1.42
MS4A3Q96HJ5 AL355306.2-202ENST00000634380 2281 ntTSL 5 BASIC6.18□□□□□ -1.42
MS4A3Q96HJ5 TRPM6-204ENST00000449912 8244 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
MS4A3Q96HJ5 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC6.17□□□□□ -1.42
MS4A3Q96HJ5 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
MS4A3Q96HJ5 AF131216.1-201ENST00000498997 5856 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
MS4A3Q96HJ5 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
MS4A3Q96HJ5 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
MS4A3Q96HJ5 NCOR1-205ENST00000395857 9501 ntTSL 5 BASIC6.17□□□□□ -1.42
MS4A3Q96HJ5 LAMB4-201ENST00000205386 5857 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
MS4A3Q96HJ5 LRMP-204ENST00000547044 2208 ntAPPRIS P2 TSL 1 (best) BASIC6.17□□□□□ -1.42
MS4A3Q96HJ5 AC008040.1-202ENST00000483289 6251 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
MS4A3Q96HJ5 LRRC37B-220ENST00000584368 2773 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
MS4A3Q96HJ5 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
MS4A3Q96HJ5 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC6.17□□□□□ -1.42
MS4A3Q96HJ5 Y_RNA.361-201ENST00000365515 120 ntBASIC6.17□□□□□ -1.42
MS4A3Q96HJ5 Y_RNA.415-201ENST00000384012 112 ntBASIC6.17□□□□□ -1.42
MS4A3Q96HJ5 MIR152-201ENST00000385212 87 ntBASIC6.17□□□□□ -1.42
MS4A3Q96HJ5 SNORA26.3-201ENST00000391119 136 ntBASIC6.17□□□□□ -1.42
MS4A3Q96HJ5 RNA5SP496-201ENST00000391240 109 ntBASIC6.17□□□□□ -1.42
MS4A3Q96HJ5 OR2H1-204ENST00000396792 1294 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
MS4A3Q96HJ5 RSPH14-202ENST00000406876 519 ntTSL 3 BASIC6.17□□□□□ -1.42
MS4A3Q96HJ5 SNORA19.1-201ENST00000410656 129 ntBASIC6.17□□□□□ -1.42
MS4A3Q96HJ5 RNU2-68P-201ENST00000410878 191 ntBASIC6.17□□□□□ -1.42
MS4A3Q96HJ5 PPIAP23-201ENST00000420099 497 ntBASIC6.17□□□□□ -1.42
MS4A3Q96HJ5 UQCRHP1-204ENST00000424609 274 ntBASIC6.17□□□□□ -1.42
MS4A3Q96HJ5 AC008065.1-201ENST00000428525 348 ntBASIC6.17□□□□□ -1.42
MS4A3Q96HJ5 AL121916.1-201ENST00000429405 308 ntBASIC6.17□□□□□ -1.42
MS4A3Q96HJ5 AL359073.1-201ENST00000448036 403 ntBASIC6.17□□□□□ -1.42
MS4A3Q96HJ5 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC6.17□□□□□ -1.42
MS4A3Q96HJ5 RNA5SP154-201ENST00000516193 111 ntBASIC6.17□□□□□ -1.42
MS4A3Q96HJ5 RNU7-115P-201ENST00000516433 55 ntBASIC6.17□□□□□ -1.42
MS4A3Q96HJ5 SCARNA18.2-201ENST00000516882 84 ntBASIC6.17□□□□□ -1.42
MS4A3Q96HJ5 AP001803.1-201ENST00000525668 147 ntBASIC6.17□□□□□ -1.42
MS4A3Q96HJ5 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC6.17□□□□□ -1.42
MS4A3Q96HJ5 AC090241.1-201ENST00000587732 621 ntBASIC6.17□□□□□ -1.42
MS4A3Q96HJ5 AC092032.1-201ENST00000603090 165 ntBASIC6.17□□□□□ -1.42
MS4A3Q96HJ5 CCL23-203ENST00000615050 624 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
MS4A3Q96HJ5 U6.99-201ENST00000637524 83 ntBASIC6.17□□□□□ -1.42
MS4A3Q96HJ5 LINC00624-201ENST00000619867 3088 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
MS4A3Q96HJ5 AL672167.1-205ENST00000641112 3080 ntBASIC6.17□□□□□ -1.42
MS4A3Q96HJ5 AC011504.1-201ENST00000623331 4103 ntBASIC6.17□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms