Protein–RNA interactions for Protein: Q96AY4

TTC28, Tetratricopeptide repeat protein 28, humanhuman

Predictions only

Length 2,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28Q96AY4 USP9YP35-201ENST00000435696 412 ntBASIC1.57□□□□□ -2.16
TTC28Q96AY4 HMGB1P45-201ENST00000435986 653 ntBASIC1.57□□□□□ -2.16
TTC28Q96AY4 TPT1P14-201ENST00000448018 505 ntBASIC1.57□□□□□ -2.16
TTC28Q96AY4 RPS23P4-201ENST00000487908 423 ntBASIC1.57□□□□□ -2.16
TTC28Q96AY4 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC1.57□□□□□ -2.16
TTC28Q96AY4 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC1.57□□□□□ -2.16
TTC28Q96AY4 AC090819.1-201ENST00000523800 1111 ntBASIC1.57□□□□□ -2.16
TTC28Q96AY4 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC1.57□□□□□ -2.16
TTC28Q96AY4 AC006329.2-201ENST00000611491 394 ntBASIC1.57□□□□□ -2.16
TTC28Q96AY4 AC084035.1-201ENST00000634543 607 ntBASIC1.57□□□□□ -2.16
TTC28Q96AY4 MIR6086-201ENST00000638065 55 ntBASIC1.57□□□□□ -2.16
TTC28Q96AY4 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
TTC28Q96AY4 UBE2L2-201ENST00000254302 429 ntBASIC1.57□□□□□ -2.16
TTC28Q96AY4 RNU6-1320P-201ENST00000390838 107 ntBASIC1.57□□□□□ -2.16
TTC28Q96AY4 RNU6-1269P-201ENST00000391139 107 ntBASIC1.57□□□□□ -2.16
TTC28Q96AY4 RNA5SP127-201ENST00000411051 133 ntBASIC1.57□□□□□ -2.16
TTC28Q96AY4 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.57□□□□□ -2.16
TTC28Q96AY4 RNU6-599P-201ENST00000459383 107 ntBASIC1.57□□□□□ -2.16
TTC28Q96AY4 RNU6-1193P-201ENST00000459461 107 ntBASIC1.57□□□□□ -2.16
TTC28Q96AY4 LDHBP3-201ENST00000514909 822 ntBASIC1.57□□□□□ -2.16
TTC28Q96AY4 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC1.57□□□□□ -2.16
TTC28Q96AY4 AL121917.1-203ENST00000605534 577 ntBASIC1.57□□□□□ -2.16
TTC28Q96AY4 RNU6-368P-201ENST00000620928 107 ntBASIC1.57□□□□□ -2.16
TTC28Q96AY4 RNU6-538P-201ENST00000622329 107 ntBASIC1.57□□□□□ -2.16
TTC28Q96AY4 AP006248.2-201ENST00000623309 592 ntBASIC1.57□□□□□ -2.16
TTC28Q96AY4 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC1.57□□□□□ -2.16
TTC28Q96AY4 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC1.57□□□□□ -2.16
TTC28Q96AY4 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
TTC28Q96AY4 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
TTC28Q96AY4 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC1.56□□□□□ -2.16
TTC28Q96AY4 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
TTC28Q96AY4 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC1.56□□□□□ -2.16
TTC28Q96AY4 AC092989.1-201ENST00000481235 277 ntBASIC1.56□□□□□ -2.16
TTC28Q96AY4 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC1.56□□□□□ -2.16
TTC28Q96AY4 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC1.56□□□□□ -2.16
TTC28Q96AY4 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC1.56□□□□□ -2.16
TTC28Q96AY4 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC1.56□□□□□ -2.16
TTC28Q96AY4 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC1.56□□□□□ -2.16
TTC28Q96AY4 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC1.56□□□□□ -2.16
TTC28Q96AY4 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC1.56□□□□□ -2.16
TTC28Q96AY4 AC023813.2-201ENST00000564321 469 ntBASIC1.56□□□□□ -2.16
TTC28Q96AY4 AC023825.1-201ENST00000566704 1030 ntBASIC1.56□□□□□ -2.16
TTC28Q96AY4 AC129850.1-201ENST00000436203 508 ntBASIC1.56□□□□□ -2.16
TTC28Q96AY4 POU5F1P7-201ENST00000508759 541 ntBASIC1.56□□□□□ -2.16
TTC28Q96AY4 MTCYBP19-201ENST00000517463 1124 ntBASIC1.56□□□□□ -2.16
TTC28Q96AY4 AC091515.1-201ENST00000548110 679 ntBASIC1.56□□□□□ -2.16
TTC28Q96AY4 TPMTP1-201ENST00000592307 737 ntBASIC1.56□□□□□ -2.16
TTC28Q96AY4 AC069234.5-201ENST00000611056 416 ntBASIC1.56□□□□□ -2.16
TTC28Q96AY4 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
TTC28Q96AY4 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC1.55□□□□□ -2.16
TTC28Q96AY4 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
TTC28Q96AY4 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.55□□□□□ -2.16
TTC28Q96AY4 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
TTC28Q96AY4 RNU6-492P-201ENST00000363035 104 ntBASIC1.55□□□□□ -2.16
TTC28Q96AY4 RNU6-198P-201ENST00000384258 104 ntBASIC1.55□□□□□ -2.16
TTC28Q96AY4 RPS12P24-201ENST00000412619 387 ntBASIC1.55□□□□□ -2.16
TTC28Q96AY4 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.55□□□□□ -2.16
TTC28Q96AY4 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC1.55□□□□□ -2.16
TTC28Q96AY4 GSTA11P-201ENST00000452866 669 ntBASIC1.55□□□□□ -2.16
TTC28Q96AY4 RNU6-405P-201ENST00000516637 110 ntBASIC1.55□□□□□ -2.16
TTC28Q96AY4 RNU6-467P-201ENST00000517027 110 ntBASIC1.55□□□□□ -2.16
TTC28Q96AY4 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC1.55□□□□□ -2.16
TTC28Q96AY4 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC1.55□□□□□ -2.16
TTC28Q96AY4 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC1.55□□□□□ -2.16
TTC28Q96AY4 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC1.55□□□□□ -2.16
TTC28Q96AY4 AC017076.1-201ENST00000607613 578 ntBASIC1.55□□□□□ -2.16
TTC28Q96AY4 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC1.55□□□□□ -2.16
TTC28Q96AY4 AC098679.5-201ENST00000624394 571 ntBASIC1.55□□□□□ -2.16
TTC28Q96AY4 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.55□□□□□ -2.16
TTC28Q96AY4 MIR6733-201ENST00000635723 61 ntBASIC1.55□□□□□ -2.16
TTC28Q96AY4 RAD1P1-201ENST00000231383 813 ntBASIC1.55□□□□□ -2.16
TTC28Q96AY4 SNORD114-27-201ENST00000363766 70 ntBASIC1.55□□□□□ -2.16
TTC28Q96AY4 RNU6-716P-201ENST00000365621 103 ntBASIC1.55□□□□□ -2.16
TTC28Q96AY4 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC1.55□□□□□ -2.16
TTC28Q96AY4 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC1.55□□□□□ -2.16
TTC28Q96AY4 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC1.55□□□□□ -2.16
TTC28Q96AY4 AC114786.4-201ENST00000508771 728 ntBASIC1.55□□□□□ -2.16
TTC28Q96AY4 AC114797.1-201ENST00000514003 728 ntBASIC1.55□□□□□ -2.16
TTC28Q96AY4 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC1.55□□□□□ -2.16
TTC28Q96AY4 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC1.55□□□□□ -2.16
TTC28Q96AY4 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC1.55□□□□□ -2.16
TTC28Q96AY4 CD69-203ENST00000536709 1020 ntTSL 2 BASIC1.55□□□□□ -2.16
TTC28Q96AY4 AC066616.2-201ENST00000559334 1481 ntBASIC1.55□□□□□ -2.16
TTC28Q96AY4 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC1.55□□□□□ -2.16
TTC28Q96AY4 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC1.54□□□□□ -2.16
TTC28Q96AY4 MIR373-201ENST00000362273 69 ntBASIC1.54□□□□□ -2.16
TTC28Q96AY4 VTRNA1-3-201ENST00000365645 89 ntBASIC1.54□□□□□ -2.16
TTC28Q96AY4 MIR222-201ENST00000384992 110 ntBASIC1.54□□□□□ -2.16
TTC28Q96AY4 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC1.54□□□□□ -2.16
TTC28Q96AY4 FABP5P3-201ENST00000437960 408 ntBASIC1.54□□□□□ -2.16
TTC28Q96AY4 MTCYBP12-201ENST00000440559 1134 ntBASIC1.54□□□□□ -2.16
TTC28Q96AY4 AC022431.1-201ENST00000450941 438 ntBASIC1.54□□□□□ -2.16
TTC28Q96AY4 RPL21P18-201ENST00000469899 480 ntBASIC1.54□□□□□ -2.16
TTC28Q96AY4 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC1.54□□□□□ -2.16
TTC28Q96AY4 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC1.54□□□□□ -2.16
TTC28Q96AY4 RN7SKP34-201ENST00000516142 244 ntBASIC1.54□□□□□ -2.16
TTC28Q96AY4 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC1.54□□□□□ -2.16
TTC28Q96AY4 AC060766.3-201ENST00000591442 263 ntBASIC1.54□□□□□ -2.16
TTC28Q96AY4 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
TTC28Q96AY4 ZNF720P1-201ENST00000562403 1939 ntBASIC1.54□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms