Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC3.13□□□□□ -1.91
PTP4A1Q93096 AC006557.5-201ENST00000603126 811 ntBASIC3.13□□□□□ -1.91
PTP4A1Q93096 AC103706.2-201ENST00000638080 240 ntBASIC3.13□□□□□ -1.91
PTP4A1Q93096 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
PTP4A1Q93096 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.13□□□□□ -1.91
PTP4A1Q93096 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
PTP4A1Q93096 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC3.13□□□□□ -1.91
PTP4A1Q93096 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.13□□□□□ -1.91
PTP4A1Q93096 AC007823.1-201ENST00000569932 1566 ntBASIC3.12□□□□□ -1.91
PTP4A1Q93096 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.12□□□□□ -1.91
PTP4A1Q93096 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
PTP4A1Q93096 FRG1CP-201ENST00000358464 769 ntBASIC3.12□□□□□ -1.91
PTP4A1Q93096 RNA5SP51-201ENST00000364750 119 ntBASIC3.12□□□□□ -1.91
PTP4A1Q93096 RNU2-33P-201ENST00000410344 192 ntBASIC3.12□□□□□ -1.91
PTP4A1Q93096 RNU6-193P-201ENST00000410977 107 ntBASIC3.12□□□□□ -1.91
PTP4A1Q93096 DBIP2-201ENST00000419076 262 ntBASIC3.12□□□□□ -1.91
PTP4A1Q93096 AC099548.1-201ENST00000421443 426 ntBASIC3.12□□□□□ -1.91
PTP4A1Q93096 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.12□□□□□ -1.91
PTP4A1Q93096 AC092017.2-201ENST00000427600 362 ntBASIC3.12□□□□□ -1.91
PTP4A1Q93096 USP12PX-201ENST00000432383 1057 ntBASIC3.12□□□□□ -1.91
PTP4A1Q93096 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
PTP4A1Q93096 FTH1P1-201ENST00000437933 532 ntBASIC3.12□□□□□ -1.91
PTP4A1Q93096 HMGB3P11-201ENST00000440127 604 ntBASIC3.12□□□□□ -1.91
PTP4A1Q93096 BNIP3P2-201ENST00000441221 577 ntBASIC3.12□□□□□ -1.91
PTP4A1Q93096 AL591503.2-201ENST00000442314 1005 ntBASIC3.12□□□□□ -1.91
PTP4A1Q93096 MTCO3P45-201ENST00000443036 613 ntBASIC3.12□□□□□ -1.91
PTP4A1Q93096 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC3.12□□□□□ -1.91
PTP4A1Q93096 RPS26P21-201ENST00000475397 348 ntBASIC3.12□□□□□ -1.91
PTP4A1Q93096 ACTR3P3-201ENST00000480448 893 ntBASIC3.12□□□□□ -1.91
PTP4A1Q93096 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
PTP4A1Q93096 DSTNP2-201ENST00000504533 515 ntBASIC3.12□□□□□ -1.91
PTP4A1Q93096 AC009901.1-201ENST00000506703 541 ntBASIC3.12□□□□□ -1.91
PTP4A1Q93096 ARL4AP2-201ENST00000507378 601 ntBASIC3.12□□□□□ -1.91
PTP4A1Q93096 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC3.12□□□□□ -1.91
PTP4A1Q93096 AC023050.2-201ENST00000544968 387 ntBASIC3.12□□□□□ -1.91
PTP4A1Q93096 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.12□□□□□ -1.91
PTP4A1Q93096 GTF2IP22-201ENST00000554443 182 ntBASIC3.12□□□□□ -1.91
PTP4A1Q93096 CASC16-202ENST00000563844 610 ntTSL 3 BASIC3.12□□□□□ -1.91
PTP4A1Q93096 AC136618.2-201ENST00000575091 400 ntBASIC3.12□□□□□ -1.91
PTP4A1Q93096 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC3.12□□□□□ -1.91
PTP4A1Q93096 MIR4506-201ENST00000584693 77 ntBASIC3.12□□□□□ -1.91
PTP4A1Q93096 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC3.12□□□□□ -1.91
PTP4A1Q93096 AC067852.3-201ENST00000589177 561 ntBASIC3.12□□□□□ -1.91
PTP4A1Q93096 BNIP3P40-201ENST00000596017 556 ntBASIC3.12□□□□□ -1.91
PTP4A1Q93096 AC010591.1-201ENST00000603941 649 ntBASIC3.12□□□□□ -1.91
PTP4A1Q93096 AC103710.4-201ENST00000609301 899 ntBASIC3.12□□□□□ -1.91
PTP4A1Q93096 AC103710.1-201ENST00000610003 901 ntBASIC3.12□□□□□ -1.91
PTP4A1Q93096 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.12□□□□□ -1.91
PTP4A1Q93096 AC009464.1-201ENST00000615731 469 ntBASIC3.12□□□□□ -1.91
PTP4A1Q93096 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC3.12□□□□□ -1.91
PTP4A1Q93096 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC3.12□□□□□ -1.91
PTP4A1Q93096 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC3.12□□□□□ -1.91
PTP4A1Q93096 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.12□□□□□ -1.91
PTP4A1Q93096 PCF11-AS1-201ENST00000602322 1516 ntBASIC3.12□□□□□ -1.91
PTP4A1Q93096 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
PTP4A1Q93096 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
PTP4A1Q93096 AC004972.1-201ENST00000623934 2209 ntBASIC3.12□□□□□ -1.91
PTP4A1Q93096 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
PTP4A1Q93096 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.12□□□□□ -1.91
PTP4A1Q93096 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
PTP4A1Q93096 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
PTP4A1Q93096 AL049781.1-201ENST00000623195 3585 ntBASIC3.11□□□□□ -1.91
PTP4A1Q93096 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
PTP4A1Q93096 AC138915.1-201ENST00000565427 1685 ntBASIC3.11□□□□□ -1.91
PTP4A1Q93096 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.11□□□□□ -1.91
PTP4A1Q93096 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.11□□□□□ -1.91
PTP4A1Q93096 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.11□□□□□ -1.91
PTP4A1Q93096 API5P2-201ENST00000397055 1498 ntBASIC3.11□□□□□ -1.91
PTP4A1Q93096 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC3.11□□□□□ -1.91
PTP4A1Q93096 RPL21P132-201ENST00000331267 462 ntBASIC3.11□□□□□ -1.91
PTP4A1Q93096 MIR148B-201ENST00000362252 99 ntBASIC3.11□□□□□ -1.91
PTP4A1Q93096 SNORD9-201ENST00000362566 104 ntBASIC3.11□□□□□ -1.91
PTP4A1Q93096 RNU6-270P-201ENST00000364131 105 ntBASIC3.11□□□□□ -1.91
PTP4A1Q93096 RNU6-83P-201ENST00000384568 112 ntBASIC3.11□□□□□ -1.91
PTP4A1Q93096 MIR554-201ENST00000384874 96 ntBASIC3.11□□□□□ -1.91
PTP4A1Q93096 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
PTP4A1Q93096 AC093578.1-201ENST00000415219 368 ntBASIC3.11□□□□□ -1.91
PTP4A1Q93096 AL451054.2-201ENST00000420896 202 ntBASIC3.11□□□□□ -1.91
PTP4A1Q93096 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC3.11□□□□□ -1.91
PTP4A1Q93096 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC3.11□□□□□ -1.91
PTP4A1Q93096 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.11□□□□□ -1.91
PTP4A1Q93096 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
PTP4A1Q93096 TPT1P14-201ENST00000448018 505 ntBASIC3.11□□□□□ -1.91
PTP4A1Q93096 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.11□□□□□ -1.91
PTP4A1Q93096 SNORD105B-201ENST00000458770 79 ntBASIC3.11□□□□□ -1.91
PTP4A1Q93096 AC087588.1-201ENST00000462203 316 ntBASIC3.11□□□□□ -1.91
PTP4A1Q93096 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC3.11□□□□□ -1.91
PTP4A1Q93096 AC138853.1-201ENST00000503549 823 ntBASIC3.11□□□□□ -1.91
PTP4A1Q93096 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC3.11□□□□□ -1.91
PTP4A1Q93096 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC3.11□□□□□ -1.91
PTP4A1Q93096 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.11□□□□□ -1.91
PTP4A1Q93096 RN7SKP18-201ENST00000516005 275 ntBASIC3.11□□□□□ -1.91
PTP4A1Q93096 RNU6-390P-201ENST00000516259 103 ntBASIC3.11□□□□□ -1.91
PTP4A1Q93096 SNORA70.18-201ENST00000516696 98 ntBASIC3.11□□□□□ -1.91
PTP4A1Q93096 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
PTP4A1Q93096 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.11□□□□□ -1.91
PTP4A1Q93096 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC3.11□□□□□ -1.91
PTP4A1Q93096 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC3.11□□□□□ -1.91
PTP4A1Q93096 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC3.11□□□□□ -1.91
PTP4A1Q93096 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms