Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC2.29□□□□□ -2.04
SHROOM3Q8TF72 RPAP2P1-201ENST00000603626 1168 ntBASIC2.29□□□□□ -2.04
SHROOM3Q8TF72 AC009570.1-201ENST00000609599 745 ntBASIC2.29□□□□□ -2.04
SHROOM3Q8TF72 AC139769.3-201ENST00000618383 175 ntBASIC2.29□□□□□ -2.04
SHROOM3Q8TF72 AC092608.3-201ENST00000625017 386 ntBASIC2.29□□□□□ -2.04
SHROOM3Q8TF72 AC099654.9-201ENST00000637055 678 ntBASIC2.29□□□□□ -2.04
SHROOM3Q8TF72 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC2.29□□□□□ -2.04
SHROOM3Q8TF72 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
SHROOM3Q8TF72 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
SHROOM3Q8TF72 SEPT7P7-201ENST00000420492 1301 ntBASIC2.29□□□□□ -2.04
SHROOM3Q8TF72 AL512646.1-201ENST00000269395 1077 ntBASIC2.29□□□□□ -2.04
SHROOM3Q8TF72 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
SHROOM3Q8TF72 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
SHROOM3Q8TF72 RNU6-543P-201ENST00000362576 108 ntBASIC2.29□□□□□ -2.04
SHROOM3Q8TF72 AL023284.1-201ENST00000403956 276 ntBASIC2.29□□□□□ -2.04
SHROOM3Q8TF72 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC2.29□□□□□ -2.04
SHROOM3Q8TF72 MTND2P9-201ENST00000422293 931 ntBASIC2.29□□□□□ -2.04
SHROOM3Q8TF72 HMGB1P48-201ENST00000446155 598 ntBASIC2.29□□□□□ -2.04
SHROOM3Q8TF72 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC2.29□□□□□ -2.04
SHROOM3Q8TF72 AC096571.1-202ENST00000506634 735 ntBASIC2.29□□□□□ -2.04
SHROOM3Q8TF72 BPTFP1-201ENST00000579209 492 ntBASIC2.29□□□□□ -2.04
SHROOM3Q8TF72 MIR5007-201ENST00000583098 95 ntBASIC2.29□□□□□ -2.04
SHROOM3Q8TF72 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC2.29□□□□□ -2.04
SHROOM3Q8TF72 AC083899.3-201ENST00000603413 594 ntBASIC2.29□□□□□ -2.04
SHROOM3Q8TF72 DUXAP3-201ENST00000603616 594 ntBASIC2.29□□□□□ -2.04
SHROOM3Q8TF72 AP003117.2-201ENST00000606010 545 ntBASIC2.29□□□□□ -2.04
SHROOM3Q8TF72 AP003485.1-201ENST00000625093 753 ntBASIC2.29□□□□□ -2.04
SHROOM3Q8TF72 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
SHROOM3Q8TF72 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.29□□□□□ -2.04
SHROOM3Q8TF72 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC2.28□□□□□ -2.04
SHROOM3Q8TF72 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC2.28□□□□□ -2.04
SHROOM3Q8TF72 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
SHROOM3Q8TF72 SNORA64-201ENST00000384674 134 ntBASIC2.28□□□□□ -2.04
SHROOM3Q8TF72 AGR3-202ENST00000402239 563 ntTSL 2 BASIC2.28□□□□□ -2.04
SHROOM3Q8TF72 HMGN2P35-201ENST00000412164 270 ntBASIC2.28□□□□□ -2.04
SHROOM3Q8TF72 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC2.28□□□□□ -2.04
SHROOM3Q8TF72 AC106883.1-201ENST00000418805 562 ntBASIC2.28□□□□□ -2.04
SHROOM3Q8TF72 MTCO2P23-201ENST00000425216 680 ntBASIC2.28□□□□□ -2.04
SHROOM3Q8TF72 AC013262.1-201ENST00000426710 252 ntBASIC2.28□□□□□ -2.04
SHROOM3Q8TF72 RPP40P1-201ENST00000426762 456 ntBASIC2.28□□□□□ -2.04
SHROOM3Q8TF72 ATP5F1P1-201ENST00000433775 569 ntBASIC2.28□□□□□ -2.04
SHROOM3Q8TF72 SETP8-201ENST00000435341 628 ntBASIC2.28□□□□□ -2.04
SHROOM3Q8TF72 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.28□□□□□ -2.04
SHROOM3Q8TF72 NDUFA5P4-201ENST00000436704 385 ntBASIC2.28□□□□□ -2.04
SHROOM3Q8TF72 USP9YP8-201ENST00000441913 500 ntBASIC2.28□□□□□ -2.04
SHROOM3Q8TF72 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC2.28□□□□□ -2.04
SHROOM3Q8TF72 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
SHROOM3Q8TF72 HMGB3P30-201ENST00000457863 606 ntBASIC2.28□□□□□ -2.04
SHROOM3Q8TF72 RPL37P6-202ENST00000464216 403 ntBASIC2.28□□□□□ -2.04
SHROOM3Q8TF72 AC090515.1-201ENST00000465295 476 ntBASIC2.28□□□□□ -2.04
SHROOM3Q8TF72 VPS26AP1-201ENST00000483197 979 ntBASIC2.28□□□□□ -2.04
SHROOM3Q8TF72 MTND4P2-201ENST00000507767 1203 ntBASIC2.28□□□□□ -2.04
SHROOM3Q8TF72 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC2.28□□□□□ -2.04
SHROOM3Q8TF72 AC048346.1-201ENST00000510247 144 ntBASIC2.28□□□□□ -2.04
SHROOM3Q8TF72 TTC39CP1-201ENST00000512513 755 ntBASIC2.28□□□□□ -2.04
SHROOM3Q8TF72 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC2.28□□□□□ -2.04
SHROOM3Q8TF72 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC2.28□□□□□ -2.04
SHROOM3Q8TF72 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.28□□□□□ -2.04
SHROOM3Q8TF72 IGJP1-201ENST00000522682 475 ntBASIC2.28□□□□□ -2.04
SHROOM3Q8TF72 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC2.28□□□□□ -2.04
SHROOM3Q8TF72 OR5BN1P-201ENST00000532955 829 ntBASIC2.28□□□□□ -2.04
SHROOM3Q8TF72 AC090695.1-201ENST00000561269 1222 ntBASIC2.28□□□□□ -2.04
SHROOM3Q8TF72 AC090666.1-201ENST00000578241 445 ntBASIC2.28□□□□□ -2.04
SHROOM3Q8TF72 MIR4448-201ENST00000584360 86 ntBASIC2.28□□□□□ -2.04
SHROOM3Q8TF72 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC2.28□□□□□ -2.04
SHROOM3Q8TF72 AC018754.1-201ENST00000607486 925 ntBASIC2.28□□□□□ -2.04
SHROOM3Q8TF72 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC2.28□□□□□ -2.04
SHROOM3Q8TF72 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC2.28□□□□□ -2.04
SHROOM3Q8TF72 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC2.28□□□□□ -2.04
SHROOM3Q8TF72 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.28□□□□□ -2.05
SHROOM3Q8TF72 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
SHROOM3Q8TF72 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.27□□□□□ -2.05
SHROOM3Q8TF72 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
SHROOM3Q8TF72 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.27□□□□□ -2.05
SHROOM3Q8TF72 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
SHROOM3Q8TF72 ZNF29P-201ENST00000225587 168 ntBASIC2.27□□□□□ -2.05
SHROOM3Q8TF72 U6.112-201ENST00000384129 70 ntBASIC2.27□□□□□ -2.05
SHROOM3Q8TF72 U8.13-201ENST00000390842 128 ntBASIC2.27□□□□□ -2.05
SHROOM3Q8TF72 AC092638.1-201ENST00000411966 1275 ntBASIC2.27□□□□□ -2.05
SHROOM3Q8TF72 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC2.27□□□□□ -2.05
SHROOM3Q8TF72 Z82205.1-201ENST00000428456 297 ntBASIC2.27□□□□□ -2.05
SHROOM3Q8TF72 RPS15AP28-201ENST00000435088 386 ntBASIC2.27□□□□□ -2.05
SHROOM3Q8TF72 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC2.27□□□□□ -2.05
SHROOM3Q8TF72 ZNF736P11Y-201ENST00000442535 1213 ntBASIC2.27□□□□□ -2.05
SHROOM3Q8TF72 ZNF736P12Y-201ENST00000443152 1243 ntBASIC2.27□□□□□ -2.05
SHROOM3Q8TF72 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC2.27□□□□□ -2.05
SHROOM3Q8TF72 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC2.27□□□□□ -2.05
SHROOM3Q8TF72 ZNF736P4Y-201ENST00000454995 1243 ntBASIC2.27□□□□□ -2.05
SHROOM3Q8TF72 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC2.27□□□□□ -2.05
SHROOM3Q8TF72 TRBV26-201ENST00000456572 344 ntBASIC2.27□□□□□ -2.05
SHROOM3Q8TF72 AC006483.1-201ENST00000487308 313 ntBASIC2.27□□□□□ -2.05
SHROOM3Q8TF72 UBE2V1P12-201ENST00000503954 474 ntBASIC2.27□□□□□ -2.05
SHROOM3Q8TF72 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC2.27□□□□□ -2.05
SHROOM3Q8TF72 AC119751.4-201ENST00000507498 357 ntBASIC2.27□□□□□ -2.05
SHROOM3Q8TF72 AC006445.2-201ENST00000510061 472 ntBASIC2.27□□□□□ -2.05
SHROOM3Q8TF72 AF279873.1-201ENST00000523393 313 ntBASIC2.27□□□□□ -2.05
SHROOM3Q8TF72 AC104417.1-201ENST00000523974 751 ntBASIC2.27□□□□□ -2.05
SHROOM3Q8TF72 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC2.27□□□□□ -2.05
SHROOM3Q8TF72 AC124293.1-201ENST00000530034 493 ntBASIC2.27□□□□□ -2.05
SHROOM3Q8TF72 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 137.5 ms