Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 RPL9P33-201ENST00000484311 566 ntBASIC3.6□□□□□ -1.83
SNED1Q8TER0 NCOR1P1-202ENST00000486162 291 ntBASIC3.6□□□□□ -1.83
SNED1Q8TER0 AC090071.1-201ENST00000507713 644 ntBASIC3.6□□□□□ -1.83
SNED1Q8TER0 CBX3P3-201ENST00000508108 532 ntBASIC3.6□□□□□ -1.83
SNED1Q8TER0 VWA8P1-201ENST00000510889 176 ntBASIC3.6□□□□□ -1.83
SNED1Q8TER0 AC008837.2-201ENST00000513076 418 ntBASIC3.6□□□□□ -1.83
SNED1Q8TER0 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.6□□□□□ -1.83
SNED1Q8TER0 OR5AK3P-201ENST00000527486 1297 ntBASIC3.6□□□□□ -1.83
SNED1Q8TER0 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC3.6□□□□□ -1.83
SNED1Q8TER0 AC087883.1-201ENST00000551882 391 ntBASIC3.6□□□□□ -1.83
SNED1Q8TER0 AC007954.1-201ENST00000554198 494 ntBASIC3.6□□□□□ -1.83
SNED1Q8TER0 AC007424.1-203ENST00000554613 687 ntBASIC3.6□□□□□ -1.83
SNED1Q8TER0 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.6□□□□□ -1.83
SNED1Q8TER0 AC027104.1-201ENST00000563702 681 ntBASIC3.6□□□□□ -1.83
SNED1Q8TER0 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.6□□□□□ -1.83
SNED1Q8TER0 ATP5F1P7-201ENST00000567330 760 ntBASIC3.6□□□□□ -1.83
SNED1Q8TER0 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.6□□□□□ -1.83
SNED1Q8TER0 VN1R79P-201ENST00000593540 513 ntBASIC3.6□□□□□ -1.83
SNED1Q8TER0 AC011451.2-201ENST00000604303 598 ntBASIC3.6□□□□□ -1.83
SNED1Q8TER0 AL139286.1-201ENST00000604465 483 ntBASIC3.6□□□□□ -1.83
SNED1Q8TER0 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
SNED1Q8TER0 FRG1HP-204ENST00000617940 757 ntBASIC3.6□□□□□ -1.83
SNED1Q8TER0 MFSD8-245ENST00000641743 948 ntBASIC3.6□□□□□ -1.83
SNED1Q8TER0 AC005539.1-201ENST00000443768 1479 ntBASIC3.6□□□□□ -1.83
SNED1Q8TER0 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
SNED1Q8TER0 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
SNED1Q8TER0 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.83
SNED1Q8TER0 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
SNED1Q8TER0 AC011477.1-204ENST00000623416 1325 ntBASIC3.59□□□□□ -1.83
SNED1Q8TER0 XPOTP1-201ENST00000443317 2398 ntBASIC3.59□□□□□ -1.84
SNED1Q8TER0 AL391994.1-201ENST00000254724 282 ntBASIC3.59□□□□□ -1.84
SNED1Q8TER0 Y_RNA.359-201ENST00000365498 102 ntBASIC3.59□□□□□ -1.84
SNED1Q8TER0 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC3.59□□□□□ -1.84
SNED1Q8TER0 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC3.59□□□□□ -1.84
SNED1Q8TER0 VTA1P1-201ENST00000414044 866 ntBASIC3.59□□□□□ -1.84
SNED1Q8TER0 GTF2IP23-201ENST00000423746 351 ntBASIC3.59□□□□□ -1.84
SNED1Q8TER0 DUTP6-201ENST00000425573 462 ntBASIC3.59□□□□□ -1.84
SNED1Q8TER0 USP9YP35-201ENST00000435696 412 ntBASIC3.59□□□□□ -1.84
SNED1Q8TER0 AC002542.1-201ENST00000440683 193 ntBASIC3.59□□□□□ -1.84
SNED1Q8TER0 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC3.59□□□□□ -1.84
SNED1Q8TER0 XACT-201ENST00000468762 497 ntTSL 5 BASIC3.59□□□□□ -1.84
SNED1Q8TER0 SETP11-201ENST00000473027 690 ntBASIC3.59□□□□□ -1.84
SNED1Q8TER0 RPL31P13-201ENST00000484151 370 ntBASIC3.59□□□□□ -1.84
SNED1Q8TER0 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC3.59□□□□□ -1.84
SNED1Q8TER0 AC114967.1-201ENST00000504890 259 ntBASIC3.59□□□□□ -1.84
SNED1Q8TER0 RN7SKP272-201ENST00000516988 232 ntBASIC3.59□□□□□ -1.84
SNED1Q8TER0 OR4C2P-201ENST00000530855 1064 ntBASIC3.59□□□□□ -1.84
SNED1Q8TER0 AC044913.1-201ENST00000557200 430 ntBASIC3.59□□□□□ -1.84
SNED1Q8TER0 AC136619.2-201ENST00000563361 631 ntBASIC3.59□□□□□ -1.84
SNED1Q8TER0 AC087481.2-201ENST00000565492 330 ntBASIC3.59□□□□□ -1.84
SNED1Q8TER0 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC3.59□□□□□ -1.84
SNED1Q8TER0 AC011260.1-201ENST00000578420 472 ntBASIC3.59□□□□□ -1.84
SNED1Q8TER0 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC3.59□□□□□ -1.84
SNED1Q8TER0 AC087683.1-201ENST00000591187 441 ntBASIC3.59□□□□□ -1.84
SNED1Q8TER0 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC3.59□□□□□ -1.84
SNED1Q8TER0 AC010678.1-201ENST00000614118 713 ntBASIC3.59□□□□□ -1.84
SNED1Q8TER0 AC008083.4-201ENST00000615076 444 ntBASIC3.59□□□□□ -1.84
SNED1Q8TER0 AC009509.4-201ENST00000619202 509 ntBASIC3.59□□□□□ -1.84
SNED1Q8TER0 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC3.59□□□□□ -1.84
SNED1Q8TER0 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC3.59□□□□□ -1.84
SNED1Q8TER0 AC010149.2-201ENST00000637608 315 ntBASIC3.59□□□□□ -1.84
SNED1Q8TER0 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
SNED1Q8TER0 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
SNED1Q8TER0 AC011978.2-201ENST00000569835 2054 ntBASIC3.58□□□□□ -1.84
SNED1Q8TER0 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
SNED1Q8TER0 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
SNED1Q8TER0 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
SNED1Q8TER0 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.58□□□□□ -1.84
SNED1Q8TER0 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.58□□□□□ -1.84
SNED1Q8TER0 AL672167.1-206ENST00000356293 943 ntBASIC3.58□□□□□ -1.84
SNED1Q8TER0 RNU5E-4P-201ENST00000364931 120 ntBASIC3.58□□□□□ -1.84
SNED1Q8TER0 SNORA9.2-201ENST00000365361 133 ntBASIC3.58□□□□□ -1.84
SNED1Q8TER0 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
SNED1Q8TER0 RNU6-1119P-201ENST00000384349 108 ntBASIC3.58□□□□□ -1.84
SNED1Q8TER0 MIR3074-201ENST00000384885 81 ntBASIC3.58□□□□□ -1.84
SNED1Q8TER0 AC110754.1-201ENST00000399740 601 ntBASIC3.58□□□□□ -1.84
SNED1Q8TER0 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC3.58□□□□□ -1.84
SNED1Q8TER0 MIR1303-201ENST00000408625 86 ntBASIC3.58□□□□□ -1.84
SNED1Q8TER0 RNU2-52P-201ENST00000410680 190 ntBASIC3.58□□□□□ -1.84
SNED1Q8TER0 RPS7P13-201ENST00000413955 498 ntBASIC3.58□□□□□ -1.84
SNED1Q8TER0 AL161449.1-201ENST00000414531 1199 ntBASIC3.58□□□□□ -1.84
SNED1Q8TER0 CDK8P2-201ENST00000415020 547 ntBASIC3.58□□□□□ -1.84
SNED1Q8TER0 DNAJA1P2-201ENST00000421360 1197 ntBASIC3.58□□□□□ -1.84
SNED1Q8TER0 AC087499.2-201ENST00000432861 149 ntBASIC3.58□□□□□ -1.84
SNED1Q8TER0 MTND1P30-201ENST00000441241 901 ntBASIC3.58□□□□□ -1.84
SNED1Q8TER0 RPL23AP76-201ENST00000441860 458 ntBASIC3.58□□□□□ -1.84
SNED1Q8TER0 TXNP1-201ENST00000441872 371 ntBASIC3.58□□□□□ -1.84
SNED1Q8TER0 COX6CP2-201ENST00000444980 225 ntBASIC3.58□□□□□ -1.84
SNED1Q8TER0 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC3.58□□□□□ -1.84
SNED1Q8TER0 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
SNED1Q8TER0 AC006539.3-201ENST00000454258 129 ntBASIC3.58□□□□□ -1.84
SNED1Q8TER0 AC027673.1-201ENST00000456245 405 ntBASIC3.58□□□□□ -1.84
SNED1Q8TER0 AL136097.1-201ENST00000456945 913 ntBASIC3.58□□□□□ -1.84
SNED1Q8TER0 SNORD109B-201ENST00000458961 67 ntBASIC3.58□□□□□ -1.84
SNED1Q8TER0 SNORD109A-201ENST00000459128 67 ntBASIC3.58□□□□□ -1.84
SNED1Q8TER0 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC3.58□□□□□ -1.84
SNED1Q8TER0 AC114781.4-201ENST00000513707 639 ntBASIC3.58□□□□□ -1.84
SNED1Q8TER0 RN7SKP283-201ENST00000517197 270 ntBASIC3.58□□□□□ -1.84
SNED1Q8TER0 AC106038.2-201ENST00000520706 568 ntBASIC3.58□□□□□ -1.84
SNED1Q8TER0 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms