Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC2.48□□□□□ -2.01
CLHC1Q8NHS4 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
CLHC1Q8NHS4 RNU6-270P-201ENST00000364131 105 ntBASIC2.48□□□□□ -2.01
CLHC1Q8NHS4 RNU6-481P-201ENST00000384194 107 ntBASIC2.48□□□□□ -2.01
CLHC1Q8NHS4 RNU6-932P-201ENST00000391108 106 ntBASIC2.48□□□□□ -2.01
CLHC1Q8NHS4 OR4K6P-201ENST00000416478 897 ntBASIC2.48□□□□□ -2.01
CLHC1Q8NHS4 AC098614.2-201ENST00000426040 255 ntBASIC2.48□□□□□ -2.01
CLHC1Q8NHS4 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC2.48□□□□□ -2.01
CLHC1Q8NHS4 AL512661.1-201ENST00000434586 1253 ntBASIC2.48□□□□□ -2.01
CLHC1Q8NHS4 UBE2V1P13-201ENST00000436983 439 ntBASIC2.48□□□□□ -2.01
CLHC1Q8NHS4 AC011816.1-201ENST00000441346 546 ntBASIC2.48□□□□□ -2.01
CLHC1Q8NHS4 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC2.48□□□□□ -2.01
CLHC1Q8NHS4 AL096803.2-201ENST00000450032 677 ntBASIC2.48□□□□□ -2.01
CLHC1Q8NHS4 RFC5P1-201ENST00000454419 874 ntBASIC2.48□□□□□ -2.01
CLHC1Q8NHS4 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC2.48□□□□□ -2.01
CLHC1Q8NHS4 AC233279.1-201ENST00000455300 423 ntBASIC2.48□□□□□ -2.01
CLHC1Q8NHS4 RNU7-26P-201ENST00000458980 63 ntBASIC2.48□□□□□ -2.01
CLHC1Q8NHS4 AC011825.1-201ENST00000484967 388 ntBASIC2.48□□□□□ -2.01
CLHC1Q8NHS4 SRIP1-201ENST00000489235 288 ntBASIC2.48□□□□□ -2.01
CLHC1Q8NHS4 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
CLHC1Q8NHS4 AC135721.1-201ENST00000497954 479 ntBASIC2.48□□□□□ -2.01
CLHC1Q8NHS4 AC118282.2-201ENST00000508739 374 ntBASIC2.48□□□□□ -2.01
CLHC1Q8NHS4 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC2.48□□□□□ -2.01
CLHC1Q8NHS4 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC2.48□□□□□ -2.01
CLHC1Q8NHS4 SUB1P1-201ENST00000524415 382 ntBASIC2.48□□□□□ -2.01
CLHC1Q8NHS4 ATP5F1P5-201ENST00000526403 760 ntBASIC2.48□□□□□ -2.01
CLHC1Q8NHS4 MAL2-203ENST00000534619 578 ntTSL 4 BASIC2.48□□□□□ -2.01
CLHC1Q8NHS4 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC2.48□□□□□ -2.01
CLHC1Q8NHS4 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC2.48□□□□□ -2.01
CLHC1Q8NHS4 AC105224.1-201ENST00000587055 421 ntBASIC2.48□□□□□ -2.01
CLHC1Q8NHS4 AC135507.2-201ENST00000612443 309 ntBASIC2.48□□□□□ -2.01
CLHC1Q8NHS4 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC2.48□□□□□ -2.01
CLHC1Q8NHS4 ANKRD62P1-201ENST00000434304 1623 ntBASIC2.48□□□□□ -2.01
CLHC1Q8NHS4 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
CLHC1Q8NHS4 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.48□□□□□ -2.01
CLHC1Q8NHS4 DBF4P1-201ENST00000412976 1892 ntBASIC2.48□□□□□ -2.01
CLHC1Q8NHS4 ZNF833P-201ENST00000424938 1494 ntBASIC2.47□□□□□ -2.01
CLHC1Q8NHS4 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.47□□□□□ -2.01
CLHC1Q8NHS4 DEFA7P-201ENST00000382676 285 ntBASIC2.47□□□□□ -2.01
CLHC1Q8NHS4 RNU6-1035P-201ENST00000384477 107 ntBASIC2.47□□□□□ -2.01
CLHC1Q8NHS4 MIR524-201ENST00000385242 87 ntBASIC2.47□□□□□ -2.01
CLHC1Q8NHS4 SNORA48.2-201ENST00000390926 124 ntBASIC2.47□□□□□ -2.01
CLHC1Q8NHS4 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.47□□□□□ -2.01
CLHC1Q8NHS4 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.47□□□□□ -2.01
CLHC1Q8NHS4 FCF1P2-201ENST00000415284 583 ntBASIC2.47□□□□□ -2.01
CLHC1Q8NHS4 AL357078.2-201ENST00000416486 427 ntBASIC2.47□□□□□ -2.01
CLHC1Q8NHS4 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.47□□□□□ -2.01
CLHC1Q8NHS4 FGF7P5-201ENST00000441829 291 ntBASIC2.47□□□□□ -2.01
CLHC1Q8NHS4 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC2.47□□□□□ -2.01
CLHC1Q8NHS4 DPPA3P1-201ENST00000448050 469 ntBASIC2.47□□□□□ -2.01
CLHC1Q8NHS4 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
CLHC1Q8NHS4 AC011753.1-201ENST00000451001 220 ntBASIC2.47□□□□□ -2.01
CLHC1Q8NHS4 MTND2P30-201ENST00000456663 382 ntBASIC2.47□□□□□ -2.01
CLHC1Q8NHS4 MRPL42P6-201ENST00000486397 371 ntBASIC2.47□□□□□ -2.01
CLHC1Q8NHS4 HMGB1P1-201ENST00000522557 636 ntBASIC2.47□□□□□ -2.01
CLHC1Q8NHS4 OR5AK1P-201ENST00000524837 922 ntBASIC2.47□□□□□ -2.01
CLHC1Q8NHS4 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC2.47□□□□□ -2.01
CLHC1Q8NHS4 AC011611.5-201ENST00000552477 578 ntBASIC2.47□□□□□ -2.01
CLHC1Q8NHS4 AC124283.4-201ENST00000581815 456 ntBASIC2.47□□□□□ -2.01
CLHC1Q8NHS4 MIR3616-201ENST00000584070 92 ntBASIC2.47□□□□□ -2.01
CLHC1Q8NHS4 AC011471.1-201ENST00000585766 187 ntBASIC2.47□□□□□ -2.01
CLHC1Q8NHS4 AL671309.1-201ENST00000603750 544 ntBASIC2.47□□□□□ -2.01
CLHC1Q8NHS4 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.47□□□□□ -2.01
CLHC1Q8NHS4 AP003399.1-201ENST00000637534 361 ntBASIC2.47□□□□□ -2.01
CLHC1Q8NHS4 OR5H6-203ENST00000642105 978 ntBASIC2.47□□□□□ -2.01
CLHC1Q8NHS4 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
CLHC1Q8NHS4 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.47□□□□□ -2.01
CLHC1Q8NHS4 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
CLHC1Q8NHS4 AL137003.2-201ENST00000606924 2538 ntBASIC2.46□□□□□ -2.01
CLHC1Q8NHS4 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
CLHC1Q8NHS4 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.46□□□□□ -2.02
CLHC1Q8NHS4 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.46□□□□□ -2.02
CLHC1Q8NHS4 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
CLHC1Q8NHS4 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
CLHC1Q8NHS4 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
CLHC1Q8NHS4 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC2.46□□□□□ -2.02
CLHC1Q8NHS4 OR1L1-202ENST00000373686 1083 ntBASIC2.46□□□□□ -2.02
CLHC1Q8NHS4 RNU1-52P-201ENST00000384190 164 ntBASIC2.46□□□□□ -2.02
CLHC1Q8NHS4 TMSB4XP8-201ENST00000402089 135 ntBASIC2.46□□□□□ -2.02
CLHC1Q8NHS4 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.46□□□□□ -2.02
CLHC1Q8NHS4 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.46□□□□□ -2.02
CLHC1Q8NHS4 TMSB4XP6-201ENST00000415187 135 ntBASIC2.46□□□□□ -2.02
CLHC1Q8NHS4 TMSB4XP1-201ENST00000424567 135 ntBASIC2.46□□□□□ -2.02
CLHC1Q8NHS4 MTCO3P30-201ENST00000426425 670 ntBASIC2.46□□□□□ -2.02
CLHC1Q8NHS4 AC241584.1-201ENST00000438469 1241 ntBASIC2.46□□□□□ -2.02
CLHC1Q8NHS4 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.46□□□□□ -2.02
CLHC1Q8NHS4 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC2.46□□□□□ -2.02
CLHC1Q8NHS4 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC2.46□□□□□ -2.02
CLHC1Q8NHS4 RPL7P55-201ENST00000450522 746 ntBASIC2.46□□□□□ -2.02
CLHC1Q8NHS4 AC092155.2-201ENST00000454675 477 ntBASIC2.46□□□□□ -2.02
CLHC1Q8NHS4 AC126182.1-201ENST00000478134 357 ntBASIC2.46□□□□□ -2.02
CLHC1Q8NHS4 MTCYBP17-201ENST00000503579 789 ntBASIC2.46□□□□□ -2.02
CLHC1Q8NHS4 RN7SKP132-201ENST00000516001 208 ntBASIC2.46□□□□□ -2.02
CLHC1Q8NHS4 RNA5SP82-201ENST00000516707 92 ntBASIC2.46□□□□□ -2.02
CLHC1Q8NHS4 RNU6-362P-201ENST00000516736 90 ntBASIC2.46□□□□□ -2.02
CLHC1Q8NHS4 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
CLHC1Q8NHS4 AC068135.2-201ENST00000569293 1028 ntBASIC2.46□□□□□ -2.02
CLHC1Q8NHS4 MYL12BP1-201ENST00000569826 507 ntBASIC2.46□□□□□ -2.02
CLHC1Q8NHS4 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.46□□□□□ -2.02
CLHC1Q8NHS4 VN1R90P-201ENST00000595717 726 ntBASIC2.46□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms