Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
CCDC112Q8NEF3 MIR1261-201ENST00000408659 82 ntBASIC2.46□□□□□ -2.02
CCDC112Q8NEF3 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC2.46□□□□□ -2.02
CCDC112Q8NEF3 SRIP2-201ENST00000428470 166 ntBASIC2.46□□□□□ -2.02
CCDC112Q8NEF3 UBE2D3P1-201ENST00000436669 444 ntBASIC2.46□□□□□ -2.02
CCDC112Q8NEF3 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC2.46□□□□□ -2.02
CCDC112Q8NEF3 OR6K5P-201ENST00000447050 945 ntBASIC2.46□□□□□ -2.02
CCDC112Q8NEF3 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC2.46□□□□□ -2.02
CCDC112Q8NEF3 UBE2Q2P9-201ENST00000490086 202 ntBASIC2.46□□□□□ -2.02
CCDC112Q8NEF3 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC2.46□□□□□ -2.02
CCDC112Q8NEF3 RNU6-488P-201ENST00000515918 99 ntBASIC2.46□□□□□ -2.02
CCDC112Q8NEF3 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
CCDC112Q8NEF3 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
CCDC112Q8NEF3 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC2.46□□□□□ -2.02
CCDC112Q8NEF3 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC2.46□□□□□ -2.02
CCDC112Q8NEF3 AL355812.1-201ENST00000603215 216 ntBASIC2.46□□□□□ -2.02
CCDC112Q8NEF3 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.46□□□□□ -2.02
CCDC112Q8NEF3 AC087241.4-201ENST00000612441 480 ntBASIC2.46□□□□□ -2.02
CCDC112Q8NEF3 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC2.46□□□□□ -2.02
CCDC112Q8NEF3 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC2.46□□□□□ -2.02
CCDC112Q8NEF3 AC017104.5-201ENST00000637647 639 ntBASIC2.46□□□□□ -2.02
CCDC112Q8NEF3 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
CCDC112Q8NEF3 ZNF519P1-201ENST00000449011 1626 ntBASIC2.46□□□□□ -2.02
CCDC112Q8NEF3 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC2.45□□□□□ -2.02
CCDC112Q8NEF3 Z82209.1-201ENST00000422141 2135 ntBASIC2.45□□□□□ -2.02
CCDC112Q8NEF3 AL513185.3-201ENST00000433335 1300 ntBASIC2.45□□□□□ -2.02
CCDC112Q8NEF3 AP006437.1-201ENST00000641440 3685 ntBASIC2.45□□□□□ -2.02
CCDC112Q8NEF3 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.45□□□□□ -2.02
CCDC112Q8NEF3 U8.2-201ENST00000363156 134 ntBASIC2.45□□□□□ -2.02
CCDC112Q8NEF3 SNORA36C-201ENST00000384289 132 ntBASIC2.45□□□□□ -2.02
CCDC112Q8NEF3 RNU6-441P-201ENST00000384545 106 ntBASIC2.45□□□□□ -2.02
CCDC112Q8NEF3 AL590623.1-201ENST00000427864 105 ntBASIC2.45□□□□□ -2.02
CCDC112Q8NEF3 AL590762.3-201ENST00000436372 640 ntBASIC2.45□□□□□ -2.02
CCDC112Q8NEF3 SDR42E1P3-201ENST00000438345 502 ntBASIC2.45□□□□□ -2.02
CCDC112Q8NEF3 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.45□□□□□ -2.02
CCDC112Q8NEF3 MTND1P33-201ENST00000446251 917 ntBASIC2.45□□□□□ -2.02
CCDC112Q8NEF3 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.45□□□□□ -2.02
CCDC112Q8NEF3 AC008481.1-201ENST00000463278 396 ntBASIC2.45□□□□□ -2.02
CCDC112Q8NEF3 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC2.45□□□□□ -2.02
CCDC112Q8NEF3 AC018630.1-201ENST00000541376 925 ntBASIC2.45□□□□□ -2.02
CCDC112Q8NEF3 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.45□□□□□ -2.02
CCDC112Q8NEF3 AC010546.1-201ENST00000569391 485 ntBASIC2.45□□□□□ -2.02
CCDC112Q8NEF3 AC012254.4-201ENST00000588843 273 ntBASIC2.45□□□□□ -2.02
CCDC112Q8NEF3 OR1M4P-201ENST00000589199 287 ntBASIC2.45□□□□□ -2.02
CCDC112Q8NEF3 AC073968.1-201ENST00000618594 637 ntBASIC2.45□□□□□ -2.02
CCDC112Q8NEF3 AC092608.3-201ENST00000625017 386 ntBASIC2.45□□□□□ -2.02
CCDC112Q8NEF3 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.44□□□□□ -2.02
CCDC112Q8NEF3 OR56A5-201ENST00000340110 738 ntBASIC2.44□□□□□ -2.02
CCDC112Q8NEF3 SNORD51.1-201ENST00000365405 77 ntBASIC2.44□□□□□ -2.02
CCDC112Q8NEF3 RNU6-1151P-201ENST00000384684 107 ntBASIC2.44□□□□□ -2.02
CCDC112Q8NEF3 ARL2BPP3-201ENST00000421226 480 ntBASIC2.44□□□□□ -2.02
CCDC112Q8NEF3 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.44□□□□□ -2.02
CCDC112Q8NEF3 HMGN2P38-201ENST00000423806 265 ntBASIC2.44□□□□□ -2.02
CCDC112Q8NEF3 MTND4P24-201ENST00000424002 397 ntBASIC2.44□□□□□ -2.02
CCDC112Q8NEF3 AL121890.1-201ENST00000435457 205 ntBASIC2.44□□□□□ -2.02
CCDC112Q8NEF3 AC011753.1-201ENST00000451001 220 ntBASIC2.44□□□□□ -2.02
CCDC112Q8NEF3 AC104073.1-201ENST00000451988 151 ntBASIC2.44□□□□□ -2.02
CCDC112Q8NEF3 RPS27P23-201ENST00000487608 251 ntBASIC2.44□□□□□ -2.02
CCDC112Q8NEF3 YWHAEP4-201ENST00000505390 198 ntBASIC2.44□□□□□ -2.02
CCDC112Q8NEF3 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC2.44□□□□□ -2.02
CCDC112Q8NEF3 RNU1-40P-201ENST00000516816 164 ntBASIC2.44□□□□□ -2.02
CCDC112Q8NEF3 RNU1-97P-201ENST00000516872 164 ntBASIC2.44□□□□□ -2.02
CCDC112Q8NEF3 AC021269.2-201ENST00000532318 330 ntBASIC2.44□□□□□ -2.02
CCDC112Q8NEF3 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC2.44□□□□□ -2.02
CCDC112Q8NEF3 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC2.44□□□□□ -2.02
CCDC112Q8NEF3 AC007938.3-201ENST00000604965 623 ntBASIC2.44□□□□□ -2.02
CCDC112Q8NEF3 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC2.44□□□□□ -2.02
CCDC112Q8NEF3 AC021851.1-201ENST00000608537 1082 ntBASIC2.44□□□□□ -2.02
CCDC112Q8NEF3 AC112503.2-201ENST00000609005 552 ntBASIC2.44□□□□□ -2.02
CCDC112Q8NEF3 AC016911.1-201ENST00000613297 452 ntBASIC2.44□□□□□ -2.02
CCDC112Q8NEF3 FRG1HP-204ENST00000617940 757 ntBASIC2.44□□□□□ -2.02
CCDC112Q8NEF3 AC009159.1-201ENST00000618386 642 ntBASIC2.44□□□□□ -2.02
CCDC112Q8NEF3 AC009831.4-201ENST00000620744 325 ntBASIC2.44□□□□□ -2.02
CCDC112Q8NEF3 AC068880.5-201ENST00000624331 290 ntBASIC2.44□□□□□ -2.02
CCDC112Q8NEF3 AP003400.6-201ENST00000624698 740 ntBASIC2.44□□□□□ -2.02
CCDC112Q8NEF3 AC068620.4-201ENST00000636730 1182 ntBASIC2.44□□□□□ -2.02
CCDC112Q8NEF3 AC111188.2-201ENST00000529697 1387 ntBASIC2.44□□□□□ -2.02
CCDC112Q8NEF3 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
CCDC112Q8NEF3 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.43□□□□□ -2.02
CCDC112Q8NEF3 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.43□□□□□ -2.02
CCDC112Q8NEF3 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.43□□□□□ -2.02
CCDC112Q8NEF3 HSPE1P11-201ENST00000339579 310 ntBASIC2.43□□□□□ -2.02
CCDC112Q8NEF3 SNORD115-48-201ENST00000364764 76 ntBASIC2.43□□□□□ -2.02
CCDC112Q8NEF3 RNU6-730P-201ENST00000383954 104 ntBASIC2.43□□□□□ -2.02
CCDC112Q8NEF3 RNU6-1072P-201ENST00000384703 107 ntBASIC2.43□□□□□ -2.02
CCDC112Q8NEF3 RNU6-443P-201ENST00000384780 107 ntBASIC2.43□□□□□ -2.02
CCDC112Q8NEF3 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.43□□□□□ -2.02
CCDC112Q8NEF3 HMGB1P11-201ENST00000413899 637 ntBASIC2.43□□□□□ -2.02
CCDC112Q8NEF3 NPM1P11-201ENST00000417106 855 ntBASIC2.43□□□□□ -2.02
CCDC112Q8NEF3 AC099677.1-201ENST00000420575 175 ntBASIC2.43□□□□□ -2.02
CCDC112Q8NEF3 AC009414.1-201ENST00000427200 443 ntBASIC2.43□□□□□ -2.02
CCDC112Q8NEF3 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
CCDC112Q8NEF3 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC2.43□□□□□ -2.02
CCDC112Q8NEF3 AC018634.1-201ENST00000437554 401 ntBASIC2.43□□□□□ -2.02
CCDC112Q8NEF3 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC2.43□□□□□ -2.02
CCDC112Q8NEF3 RPL23AP7-203ENST00000449021 469 ntBASIC2.43□□□□□ -2.02
CCDC112Q8NEF3 MTND2P19-201ENST00000449129 1012 ntBASIC2.43□□□□□ -2.02
CCDC112Q8NEF3 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC2.43□□□□□ -2.02
CCDC112Q8NEF3 UBL5P3-201ENST00000475112 231 ntBASIC2.43□□□□□ -2.02
CCDC112Q8NEF3 AC109486.1-201ENST00000486833 374 ntBASIC2.43□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms