Protein–RNA interactions for Protein: Q8N8U3

RTL3, Retrotransposon Gag-like protein 3, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3Q8N8U3 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.3□□□□□ -1.88
RTL3Q8N8U3 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC3.3□□□□□ -1.88
RTL3Q8N8U3 AL138880.2-201ENST00000616214 239 ntBASIC3.3□□□□□ -1.88
RTL3Q8N8U3 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
RTL3Q8N8U3 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
RTL3Q8N8U3 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
RTL3Q8N8U3 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
RTL3Q8N8U3 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.3□□□□□ -1.88
RTL3Q8N8U3 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.3□□□□□ -1.88
RTL3Q8N8U3 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.3□□□□□ -1.88
RTL3Q8N8U3 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
RTL3Q8N8U3 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.29□□□□□ -1.88
RTL3Q8N8U3 AL022578.1-201ENST00000439330 1433 ntBASIC3.29□□□□□ -1.88
RTL3Q8N8U3 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.29□□□□□ -1.88
RTL3Q8N8U3 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
RTL3Q8N8U3 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
RTL3Q8N8U3 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
RTL3Q8N8U3 SNORA14A-201ENST00000364773 135 ntBASIC3.29□□□□□ -1.88
RTL3Q8N8U3 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
RTL3Q8N8U3 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC3.29□□□□□ -1.88
RTL3Q8N8U3 RNA5SP107-201ENST00000411358 122 ntBASIC3.29□□□□□ -1.88
RTL3Q8N8U3 RAP1BP1-201ENST00000412709 553 ntBASIC3.29□□□□□ -1.88
RTL3Q8N8U3 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC3.29□□□□□ -1.88
RTL3Q8N8U3 SETP8-201ENST00000435341 628 ntBASIC3.29□□□□□ -1.88
RTL3Q8N8U3 AC091862.1-201ENST00000438016 1100 ntBASIC3.29□□□□□ -1.88
RTL3Q8N8U3 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC3.29□□□□□ -1.88
RTL3Q8N8U3 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC3.29□□□□□ -1.88
RTL3Q8N8U3 AC104472.2-201ENST00000469035 601 ntBASIC3.29□□□□□ -1.88
RTL3Q8N8U3 AC109925.1-201ENST00000478069 331 ntBASIC3.29□□□□□ -1.88
RTL3Q8N8U3 RPL31P60-201ENST00000478450 367 ntBASIC3.29□□□□□ -1.88
RTL3Q8N8U3 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
RTL3Q8N8U3 AC109445.1-201ENST00000512356 383 ntBASIC3.29□□□□□ -1.88
RTL3Q8N8U3 AC010265.1-201ENST00000513509 211 ntBASIC3.29□□□□□ -1.88
RTL3Q8N8U3 AC093677.1-201ENST00000514414 678 ntBASIC3.29□□□□□ -1.88
RTL3Q8N8U3 AC026801.2-201ENST00000515352 425 ntBASIC3.29□□□□□ -1.88
RTL3Q8N8U3 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
RTL3Q8N8U3 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
RTL3Q8N8U3 uc_338.25-201ENST00000613756 156 ntBASIC3.29□□□□□ -1.88
RTL3Q8N8U3 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
RTL3Q8N8U3 AC091304.6-201ENST00000619761 202 ntBASIC3.29□□□□□ -1.88
RTL3Q8N8U3 AC007490.1-201ENST00000624321 703 ntBASIC3.29□□□□□ -1.88
RTL3Q8N8U3 AC091903.1-201ENST00000624322 454 ntBASIC3.29□□□□□ -1.88
RTL3Q8N8U3 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC3.29□□□□□ -1.88
RTL3Q8N8U3 AC103988.1-201ENST00000566382 2177 ntBASIC3.29□□□□□ -1.88
RTL3Q8N8U3 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
RTL3Q8N8U3 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
RTL3Q8N8U3 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
RTL3Q8N8U3 RNU5A-1-201ENST00000362698 116 ntBASIC3.28□□□□□ -1.88
RTL3Q8N8U3 SNORD46.1-201ENST00000364139 104 ntBASIC3.28□□□□□ -1.88
RTL3Q8N8U3 Y_RNA.311-201ENST00000365068 96 ntBASIC3.28□□□□□ -1.88
RTL3Q8N8U3 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
RTL3Q8N8U3 SNORD116-8-201ENST00000384365 95 ntBASIC3.28□□□□□ -1.88
RTL3Q8N8U3 RNU4-47P-201ENST00000410876 114 ntBASIC3.28□□□□□ -1.88
RTL3Q8N8U3 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC3.28□□□□□ -1.88
RTL3Q8N8U3 ATP5F1P1-201ENST00000433775 569 ntBASIC3.28□□□□□ -1.88
RTL3Q8N8U3 YWHAZP7-201ENST00000436906 631 ntBASIC3.28□□□□□ -1.88
RTL3Q8N8U3 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.28□□□□□ -1.88
RTL3Q8N8U3 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC3.28□□□□□ -1.88
RTL3Q8N8U3 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC3.28□□□□□ -1.88
RTL3Q8N8U3 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.28□□□□□ -1.88
RTL3Q8N8U3 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC3.28□□□□□ -1.88
RTL3Q8N8U3 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC3.28□□□□□ -1.88
RTL3Q8N8U3 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.28□□□□□ -1.88
RTL3Q8N8U3 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC3.28□□□□□ -1.88
RTL3Q8N8U3 AC021146.8-201ENST00000507455 733 ntBASIC3.28□□□□□ -1.88
RTL3Q8N8U3 RNU6-528P-201ENST00000516926 100 ntBASIC3.28□□□□□ -1.88
RTL3Q8N8U3 AC105185.1-201ENST00000518705 535 ntBASIC3.28□□□□□ -1.88
RTL3Q8N8U3 AC104027.1-201ENST00000521887 300 ntBASIC3.28□□□□□ -1.88
RTL3Q8N8U3 EMP1-206ENST00000537612 505 ntTSL 3 BASIC3.28□□□□□ -1.88
RTL3Q8N8U3 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.28□□□□□ -1.88
RTL3Q8N8U3 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.28□□□□□ -1.88
RTL3Q8N8U3 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC3.28□□□□□ -1.88
RTL3Q8N8U3 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.28□□□□□ -1.88
RTL3Q8N8U3 AC018638.7-201ENST00000605836 1114 ntBASIC3.28□□□□□ -1.88
RTL3Q8N8U3 AL450472.3-201ENST00000615578 367 ntBASIC3.28□□□□□ -1.88
RTL3Q8N8U3 AC131159.1-201ENST00000621854 213 ntBASIC3.28□□□□□ -1.88
RTL3Q8N8U3 CU459211.1-201ENST00000635667 749 ntBASIC3.28□□□□□ -1.88
RTL3Q8N8U3 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC3.28□□□□□ -1.88
RTL3Q8N8U3 MTND5P24-201ENST00000438892 1767 ntBASIC3.28□□□□□ -1.89
RTL3Q8N8U3 ZNF736P9Y-201ENST00000439586 1345 ntBASIC3.27□□□□□ -1.89
RTL3Q8N8U3 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
RTL3Q8N8U3 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
RTL3Q8N8U3 RNU6-1197P-201ENST00000391183 107 ntBASIC3.27□□□□□ -1.89
RTL3Q8N8U3 AC006960.1-201ENST00000419980 153 ntBASIC3.27□□□□□ -1.89
RTL3Q8N8U3 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC3.27□□□□□ -1.89
RTL3Q8N8U3 BX890604.2-201ENST00000427883 474 ntBASIC3.27□□□□□ -1.89
RTL3Q8N8U3 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC3.27□□□□□ -1.89
RTL3Q8N8U3 MTND5P25-201ENST00000430499 799 ntBASIC3.27□□□□□ -1.89
RTL3Q8N8U3 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC3.27□□□□□ -1.89
RTL3Q8N8U3 AC006028.1-201ENST00000438379 402 ntBASIC3.27□□□□□ -1.89
RTL3Q8N8U3 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.27□□□□□ -1.89
RTL3Q8N8U3 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC3.27□□□□□ -1.89
RTL3Q8N8U3 AL606662.1-201ENST00000445763 553 ntBASIC3.27□□□□□ -1.89
RTL3Q8N8U3 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC3.27□□□□□ -1.89
RTL3Q8N8U3 ART2BP-201ENST00000453501 499 ntBASIC3.27□□□□□ -1.89
RTL3Q8N8U3 BX322784.1-201ENST00000455793 1077 ntBASIC3.27□□□□□ -1.89
RTL3Q8N8U3 ATG12P2-201ENST00000456830 416 ntBASIC3.27□□□□□ -1.89
RTL3Q8N8U3 AL031183.1-201ENST00000457667 207 ntBASIC3.27□□□□□ -1.89
RTL3Q8N8U3 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.27□□□□□ -1.89
RTL3Q8N8U3 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms