Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.47□□□□□ -1.85
BEST3Q8N1M1 AP003392.2-201ENST00000527269 208 ntBASIC3.47□□□□□ -1.85
BEST3Q8N1M1 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.47□□□□□ -1.85
BEST3Q8N1M1 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.47□□□□□ -1.85
BEST3Q8N1M1 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.47□□□□□ -1.85
BEST3Q8N1M1 MTND1P15-201ENST00000579262 949 ntBASIC3.47□□□□□ -1.85
BEST3Q8N1M1 COX6CP3-201ENST00000580869 223 ntBASIC3.47□□□□□ -1.85
BEST3Q8N1M1 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC3.47□□□□□ -1.85
BEST3Q8N1M1 AP001429.1-201ENST00000602568 530 ntBASIC3.47□□□□□ -1.85
BEST3Q8N1M1 AC091805.2-201ENST00000603848 235 ntBASIC3.47□□□□□ -1.85
BEST3Q8N1M1 AL136363.2-201ENST00000604173 851 ntBASIC3.47□□□□□ -1.85
BEST3Q8N1M1 AC004908.2-201ENST00000609090 574 ntBASIC3.47□□□□□ -1.85
BEST3Q8N1M1 AC015540.1-201ENST00000615828 501 ntBASIC3.47□□□□□ -1.85
BEST3Q8N1M1 AL159972.1-201ENST00000625150 448 ntBASIC3.47□□□□□ -1.85
BEST3Q8N1M1 PISRT1-201ENST00000626175 531 ntBASIC3.47□□□□□ -1.85
BEST3Q8N1M1 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.47□□□□□ -1.85
BEST3Q8N1M1 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.47□□□□□ -1.85
BEST3Q8N1M1 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.47□□□□□ -1.85
BEST3Q8N1M1 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
BEST3Q8N1M1 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.47□□□□□ -1.85
BEST3Q8N1M1 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
BEST3Q8N1M1 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.46□□□□□ -1.85
BEST3Q8N1M1 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
BEST3Q8N1M1 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
BEST3Q8N1M1 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
BEST3Q8N1M1 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.46□□□□□ -1.85
BEST3Q8N1M1 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.46□□□□□ -1.86
BEST3Q8N1M1 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
BEST3Q8N1M1 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
BEST3Q8N1M1 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
BEST3Q8N1M1 GNG5P1-201ENST00000255500 204 ntBASIC3.46□□□□□ -1.86
BEST3Q8N1M1 RNA5SP167-201ENST00000365461 116 ntBASIC3.46□□□□□ -1.86
BEST3Q8N1M1 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
BEST3Q8N1M1 Y_RNA.517-201ENST00000384551 106 ntBASIC3.46□□□□□ -1.86
BEST3Q8N1M1 MIR19A-201ENST00000384878 82 ntBASIC3.46□□□□□ -1.86
BEST3Q8N1M1 RNU6-754P-201ENST00000391166 107 ntBASIC3.46□□□□□ -1.86
BEST3Q8N1M1 RPL7P60-201ENST00000397636 735 ntBASIC3.46□□□□□ -1.86
BEST3Q8N1M1 Z98941.1-201ENST00000407764 100 ntBASIC3.46□□□□□ -1.86
BEST3Q8N1M1 RNU2-43P-201ENST00000410306 190 ntBASIC3.46□□□□□ -1.86
BEST3Q8N1M1 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.46□□□□□ -1.86
BEST3Q8N1M1 SYF2P2-201ENST00000417620 583 ntBASIC3.46□□□□□ -1.86
BEST3Q8N1M1 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.46□□□□□ -1.86
BEST3Q8N1M1 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.46□□□□□ -1.86
BEST3Q8N1M1 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC3.46□□□□□ -1.86
BEST3Q8N1M1 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC3.46□□□□□ -1.86
BEST3Q8N1M1 RPL21P112-201ENST00000434403 463 ntBASIC3.46□□□□□ -1.86
BEST3Q8N1M1 FTH1P1-201ENST00000437933 532 ntBASIC3.46□□□□□ -1.86
BEST3Q8N1M1 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC3.46□□□□□ -1.86
BEST3Q8N1M1 TPT1P14-201ENST00000448018 505 ntBASIC3.46□□□□□ -1.86
BEST3Q8N1M1 GAPDHP17-201ENST00000449858 1001 ntBASIC3.46□□□□□ -1.86
BEST3Q8N1M1 RPS24P6-201ENST00000452670 400 ntBASIC3.46□□□□□ -1.86
BEST3Q8N1M1 AC007967.1-201ENST00000455422 1159 ntBASIC3.46□□□□□ -1.86
BEST3Q8N1M1 snoU13.24-201ENST00000458998 104 ntBASIC3.46□□□□□ -1.86
BEST3Q8N1M1 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC3.46□□□□□ -1.86
BEST3Q8N1M1 AC021146.1-201ENST00000511202 716 ntBASIC3.46□□□□□ -1.86
BEST3Q8N1M1 AC023141.12-201ENST00000512399 199 ntBASIC3.46□□□□□ -1.86
BEST3Q8N1M1 AC022483.1-201ENST00000514020 567 ntBASIC3.46□□□□□ -1.86
BEST3Q8N1M1 RNA5SP208-201ENST00000516156 78 ntBASIC3.46□□□□□ -1.86
BEST3Q8N1M1 RNU6-798P-201ENST00000516912 103 ntBASIC3.46□□□□□ -1.86
BEST3Q8N1M1 RNU2-46P-201ENST00000517038 113 ntBASIC3.46□□□□□ -1.86
BEST3Q8N1M1 IGKV2D-23-201ENST00000518179 286 ntBASIC3.46□□□□□ -1.86
BEST3Q8N1M1 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.46□□□□□ -1.86
BEST3Q8N1M1 IGKV2D-19-201ENST00000523346 262 ntBASIC3.46□□□□□ -1.86
BEST3Q8N1M1 AP003181.2-201ENST00000528941 181 ntBASIC3.46□□□□□ -1.86
BEST3Q8N1M1 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.46□□□□□ -1.86
BEST3Q8N1M1 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.46□□□□□ -1.86
BEST3Q8N1M1 OR4T1P-201ENST00000554933 911 ntBASIC3.46□□□□□ -1.86
BEST3Q8N1M1 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC3.46□□□□□ -1.86
BEST3Q8N1M1 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.46□□□□□ -1.86
BEST3Q8N1M1 NRBF2P1-201ENST00000587407 859 ntBASIC3.46□□□□□ -1.86
BEST3Q8N1M1 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC3.46□□□□□ -1.86
BEST3Q8N1M1 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC3.46□□□□□ -1.86
BEST3Q8N1M1 DUXAP4-201ENST00000603046 613 ntBASIC3.46□□□□□ -1.86
BEST3Q8N1M1 AL034351.1-201ENST00000605288 668 ntBASIC3.46□□□□□ -1.86
BEST3Q8N1M1 SNORA62.6-201ENST00000606322 83 ntBASIC3.46□□□□□ -1.86
BEST3Q8N1M1 AC091304.9-201ENST00000612091 226 ntBASIC3.46□□□□□ -1.86
BEST3Q8N1M1 AC090970.3-201ENST00000612566 866 ntBASIC3.46□□□□□ -1.86
BEST3Q8N1M1 AC008498.1-201ENST00000613012 531 ntBASIC3.46□□□□□ -1.86
BEST3Q8N1M1 AL391261.4-201ENST00000616012 481 ntBASIC3.46□□□□□ -1.86
BEST3Q8N1M1 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.46□□□□□ -1.86
BEST3Q8N1M1 AC084035.1-201ENST00000634543 607 ntBASIC3.46□□□□□ -1.86
BEST3Q8N1M1 AC138649.5-201ENST00000637456 137 ntBASIC3.46□□□□□ -1.86
BEST3Q8N1M1 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.46□□□□□ -1.86
BEST3Q8N1M1 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.46□□□□□ -1.86
BEST3Q8N1M1 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
BEST3Q8N1M1 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.45□□□□□ -1.86
BEST3Q8N1M1 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.45□□□□□ -1.86
BEST3Q8N1M1 AC092447.7-201ENST00000422212 1621 ntBASIC3.45□□□□□ -1.86
BEST3Q8N1M1 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
BEST3Q8N1M1 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
BEST3Q8N1M1 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
BEST3Q8N1M1 U8.3-201ENST00000363321 132 ntBASIC3.45□□□□□ -1.86
BEST3Q8N1M1 RNA5SP51-201ENST00000364750 119 ntBASIC3.45□□□□□ -1.86
BEST3Q8N1M1 RNY4P34-201ENST00000364779 95 ntBASIC3.45□□□□□ -1.86
BEST3Q8N1M1 MIR7-3-201ENST00000384898 110 ntBASIC3.45□□□□□ -1.86
BEST3Q8N1M1 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.45□□□□□ -1.86
BEST3Q8N1M1 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC3.45□□□□□ -1.86
BEST3Q8N1M1 RPS29P4-201ENST00000414733 161 ntBASIC3.45□□□□□ -1.86
BEST3Q8N1M1 AC093578.1-201ENST00000415219 368 ntBASIC3.45□□□□□ -1.86
BEST3Q8N1M1 TOMM22P1-201ENST00000418578 312 ntBASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms