Protein–RNA interactions for Protein: Q8IX90

SKA3, Spindle and kinetochore-associated protein 3, humanhuman

Predictions only

Length 412 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3Q8IX90 AL353678.1-201ENST00000422735 741 ntBASIC2.75□□□□□ -1.97
SKA3Q8IX90 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC2.75□□□□□ -1.97
SKA3Q8IX90 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC2.75□□□□□ -1.97
SKA3Q8IX90 SNRPEP7-201ENST00000438350 220 ntBASIC2.75□□□□□ -1.97
SKA3Q8IX90 RABEPKP1-201ENST00000440529 1026 ntBASIC2.75□□□□□ -1.97
SKA3Q8IX90 MTND5P14-201ENST00000441481 1267 ntBASIC2.75□□□□□ -1.97
SKA3Q8IX90 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.75□□□□□ -1.97
SKA3Q8IX90 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC2.75□□□□□ -1.97
SKA3Q8IX90 ANKRD26P4-201ENST00000455755 950 ntBASIC2.75□□□□□ -1.97
SKA3Q8IX90 RN7SL504P-201ENST00000494496 287 ntBASIC2.75□□□□□ -1.97
SKA3Q8IX90 RNA5SP468-201ENST00000516782 93 ntBASIC2.75□□□□□ -1.97
SKA3Q8IX90 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
SKA3Q8IX90 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC2.75□□□□□ -1.97
SKA3Q8IX90 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC2.75□□□□□ -1.97
SKA3Q8IX90 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC2.75□□□□□ -1.97
SKA3Q8IX90 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC2.75□□□□□ -1.97
SKA3Q8IX90 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC2.75□□□□□ -1.97
SKA3Q8IX90 UBL5P2-201ENST00000583788 219 ntBASIC2.75□□□□□ -1.97
SKA3Q8IX90 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC2.75□□□□□ -1.97
SKA3Q8IX90 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC2.75□□□□□ -1.97
SKA3Q8IX90 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC2.75□□□□□ -1.97
SKA3Q8IX90 AC012119.1-201ENST00000603184 222 ntBASIC2.75□□□□□ -1.97
SKA3Q8IX90 AC007179.3-201ENST00000604976 235 ntBASIC2.75□□□□□ -1.97
SKA3Q8IX90 AC034229.4-201ENST00000607861 441 ntBASIC2.75□□□□□ -1.97
SKA3Q8IX90 AC011330.2-201ENST00000621680 635 ntBASIC2.75□□□□□ -1.97
SKA3Q8IX90 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.75□□□□□ -1.97
SKA3Q8IX90 AC103988.1-201ENST00000566382 2177 ntBASIC2.75□□□□□ -1.97
SKA3Q8IX90 AC108206.1-201ENST00000570186 4159 ntBASIC2.75□□□□□ -1.97
SKA3Q8IX90 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
SKA3Q8IX90 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC2.75□□□□□ -1.97
SKA3Q8IX90 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC2.74□□□□□ -1.97
SKA3Q8IX90 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
SKA3Q8IX90 AC011477.1-204ENST00000623416 1325 ntBASIC2.74□□□□□ -1.97
SKA3Q8IX90 MAPK10-322ENST00000641485 4530 ntBASIC2.74□□□□□ -1.97
SKA3Q8IX90 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
SKA3Q8IX90 FRG1BP-201ENST00000278882 761 ntBASIC2.74□□□□□ -1.97
SKA3Q8IX90 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
SKA3Q8IX90 SNORD46.1-201ENST00000364139 104 ntBASIC2.74□□□□□ -1.97
SKA3Q8IX90 RNU6-173P-201ENST00000364215 104 ntBASIC2.74□□□□□ -1.97
SKA3Q8IX90 RNU6-777P-201ENST00000364265 104 ntBASIC2.74□□□□□ -1.97
SKA3Q8IX90 RNA5-8SP4-201ENST00000365096 150 ntBASIC2.74□□□□□ -1.97
SKA3Q8IX90 SNORA7.4-201ENST00000384249 137 ntBASIC2.74□□□□□ -1.97
SKA3Q8IX90 SNORD15B-201ENST00000384714 146 ntBASIC2.74□□□□□ -1.97
SKA3Q8IX90 RNU6-882P-201ENST00000391025 103 ntBASIC2.74□□□□□ -1.97
SKA3Q8IX90 AC110754.1-201ENST00000399740 601 ntBASIC2.74□□□□□ -1.97
SKA3Q8IX90 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
SKA3Q8IX90 AL591034.1-201ENST00000407447 340 ntBASIC2.74□□□□□ -1.97
SKA3Q8IX90 RPS24P7-201ENST00000416921 246 ntBASIC2.74□□□□□ -1.97
SKA3Q8IX90 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC2.74□□□□□ -1.97
SKA3Q8IX90 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC2.74□□□□□ -1.97
SKA3Q8IX90 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC2.74□□□□□ -1.97
SKA3Q8IX90 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC2.74□□□□□ -1.97
SKA3Q8IX90 RAC1P7-201ENST00000445367 377 ntBASIC2.74□□□□□ -1.97
SKA3Q8IX90 OR6K5P-201ENST00000447050 945 ntBASIC2.74□□□□□ -1.97
SKA3Q8IX90 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC2.74□□□□□ -1.97
SKA3Q8IX90 AC104978.1-201ENST00000449387 391 ntBASIC2.74□□□□□ -1.97
SKA3Q8IX90 GSTA11P-201ENST00000452866 669 ntBASIC2.74□□□□□ -1.97
SKA3Q8IX90 DCLRE1CP1-201ENST00000454630 470 ntBASIC2.74□□□□□ -1.97
SKA3Q8IX90 OR6K1P-201ENST00000456766 971 ntBASIC2.74□□□□□ -1.97
SKA3Q8IX90 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC2.74□□□□□ -1.97
SKA3Q8IX90 snoU13.8-201ENST00000458890 104 ntBASIC2.74□□□□□ -1.97
SKA3Q8IX90 ARL4AP2-201ENST00000507378 601 ntBASIC2.74□□□□□ -1.97
SKA3Q8IX90 AC017037.2-201ENST00000513850 890 ntBASIC2.74□□□□□ -1.97
SKA3Q8IX90 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.74□□□□□ -1.97
SKA3Q8IX90 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC2.74□□□□□ -1.97
SKA3Q8IX90 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC2.74□□□□□ -1.97
SKA3Q8IX90 OR4K8P-201ENST00000578842 1048 ntBASIC2.74□□□□□ -1.97
SKA3Q8IX90 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC2.74□□□□□ -1.97
SKA3Q8IX90 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC2.74□□□□□ -1.97
SKA3Q8IX90 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC2.74□□□□□ -1.97
SKA3Q8IX90 AC022022.2-201ENST00000602989 360 ntBASIC2.74□□□□□ -1.97
SKA3Q8IX90 AL022099.1-201ENST00000604551 712 ntBASIC2.74□□□□□ -1.97
SKA3Q8IX90 TUG1_1.1-201ENST00000610654 145 ntBASIC2.74□□□□□ -1.97
SKA3Q8IX90 AL355810.1-201ENST00000614629 552 ntBASIC2.74□□□□□ -1.97
SKA3Q8IX90 AL590099.1-201ENST00000615276 138 ntBASIC2.74□□□□□ -1.97
SKA3Q8IX90 AL136981.2-201ENST00000617319 734 ntBASIC2.74□□□□□ -1.97
SKA3Q8IX90 AC026422.1-201ENST00000623961 452 ntBASIC2.74□□□□□ -1.97
SKA3Q8IX90 AC079228.1-201ENST00000624774 1049 ntBASIC2.74□□□□□ -1.97
SKA3Q8IX90 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
SKA3Q8IX90 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC2.74□□□□□ -1.97
SKA3Q8IX90 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
SKA3Q8IX90 SGO1P2-201ENST00000429458 1589 ntBASIC2.74□□□□□ -1.97
SKA3Q8IX90 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC2.74□□□□□ -1.97
SKA3Q8IX90 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
SKA3Q8IX90 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
SKA3Q8IX90 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC2.73□□□□□ -1.97
SKA3Q8IX90 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
SKA3Q8IX90 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
SKA3Q8IX90 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.73□□□□□ -1.97
SKA3Q8IX90 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC2.73□□□□□ -1.97
SKA3Q8IX90 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
SKA3Q8IX90 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
SKA3Q8IX90 RNU6-289P-201ENST00000364093 107 ntBASIC2.73□□□□□ -1.97
SKA3Q8IX90 SNORA38.1-201ENST00000364172 131 ntBASIC2.73□□□□□ -1.97
SKA3Q8IX90 MIR135A2-201ENST00000384854 100 ntBASIC2.73□□□□□ -1.97
SKA3Q8IX90 MTND4P13-201ENST00000402078 1023 ntBASIC2.73□□□□□ -1.97
SKA3Q8IX90 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC2.73□□□□□ -1.97
SKA3Q8IX90 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC2.73□□□□□ -1.97
SKA3Q8IX90 AC245054.2-201ENST00000415639 319 ntBASIC2.73□□□□□ -1.97
SKA3Q8IX90 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms