Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 RANP9-201ENST00000519957 271 ntBASIC4.56□□□□□ -1.68
UBE3BQ7Z3V4 AC022616.6-201ENST00000520479 119 ntBASIC4.56□□□□□ -1.68
UBE3BQ7Z3V4 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC4.56□□□□□ -1.68
UBE3BQ7Z3V4 AP003181.2-201ENST00000528941 181 ntBASIC4.56□□□□□ -1.68
UBE3BQ7Z3V4 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC4.56□□□□□ -1.68
UBE3BQ7Z3V4 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC4.56□□□□□ -1.68
UBE3BQ7Z3V4 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.56□□□□□ -1.68
UBE3BQ7Z3V4 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC4.56□□□□□ -1.68
UBE3BQ7Z3V4 AC091135.1-201ENST00000585943 307 ntBASIC4.56□□□□□ -1.68
UBE3BQ7Z3V4 AC011468.4-201ENST00000603942 409 ntBASIC4.56□□□□□ -1.68
UBE3BQ7Z3V4 AC012468.1-201ENST00000604888 430 ntBASIC4.56□□□□□ -1.68
UBE3BQ7Z3V4 AC008277.2-201ENST00000605196 797 ntBASIC4.56□□□□□ -1.68
UBE3BQ7Z3V4 AC011816.2-201ENST00000607089 556 ntBASIC4.56□□□□□ -1.68
UBE3BQ7Z3V4 AC002553.4-201ENST00000616896 331 ntBASIC4.56□□□□□ -1.68
UBE3BQ7Z3V4 DLEU1_1.1-201ENST00000618107 190 ntBASIC4.56□□□□□ -1.68
UBE3BQ7Z3V4 AC009159.1-201ENST00000618386 642 ntBASIC4.56□□□□□ -1.68
UBE3BQ7Z3V4 AC092794.2-201ENST00000620933 563 ntBASIC4.56□□□□□ -1.68
UBE3BQ7Z3V4 AC243312.2-201ENST00000623340 601 ntBASIC4.56□□□□□ -1.68
UBE3BQ7Z3V4 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
UBE3BQ7Z3V4 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.56□□□□□ -1.68
UBE3BQ7Z3V4 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
UBE3BQ7Z3V4 AC018529.3-201ENST00000624212 2254 ntBASIC4.56□□□□□ -1.68
UBE3BQ7Z3V4 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC4.56□□□□□ -1.68
UBE3BQ7Z3V4 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
UBE3BQ7Z3V4 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
UBE3BQ7Z3V4 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.55□□□□□ -1.68
UBE3BQ7Z3V4 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC4.55□□□□□ -1.68
UBE3BQ7Z3V4 FRG1BP-201ENST00000278882 761 ntBASIC4.55□□□□□ -1.68
UBE3BQ7Z3V4 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
UBE3BQ7Z3V4 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
UBE3BQ7Z3V4 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
UBE3BQ7Z3V4 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
UBE3BQ7Z3V4 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
UBE3BQ7Z3V4 RNU6-28P-201ENST00000362378 107 ntBASIC4.55□□□□□ -1.68
UBE3BQ7Z3V4 RNA5SP387-201ENST00000364226 106 ntBASIC4.55□□□□□ -1.68
UBE3BQ7Z3V4 RNU6-853P-201ENST00000364306 107 ntBASIC4.55□□□□□ -1.68
UBE3BQ7Z3V4 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.55□□□□□ -1.68
UBE3BQ7Z3V4 RNU6-1279P-201ENST00000383917 103 ntBASIC4.55□□□□□ -1.68
UBE3BQ7Z3V4 Y_RNA.453-201ENST00000384223 109 ntBASIC4.55□□□□□ -1.68
UBE3BQ7Z3V4 MIR218-2-201ENST00000385006 110 ntBASIC4.55□□□□□ -1.68
UBE3BQ7Z3V4 RNU2-8P-201ENST00000410727 190 ntBASIC4.55□□□□□ -1.68
UBE3BQ7Z3V4 AC078974.1-201ENST00000411597 223 ntBASIC4.55□□□□□ -1.68
UBE3BQ7Z3V4 DBIP2-201ENST00000419076 262 ntBASIC4.55□□□□□ -1.68
UBE3BQ7Z3V4 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC4.55□□□□□ -1.68
UBE3BQ7Z3V4 AL391219.1-201ENST00000422570 483 ntBASIC4.55□□□□□ -1.68
UBE3BQ7Z3V4 TRIM60P10Y-201ENST00000425589 751 ntBASIC4.55□□□□□ -1.68
UBE3BQ7Z3V4 AC073464.1-201ENST00000429823 534 ntBASIC4.55□□□□□ -1.68
UBE3BQ7Z3V4 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC4.55□□□□□ -1.68
UBE3BQ7Z3V4 TRIM60P8Y-201ENST00000436338 762 ntBASIC4.55□□□□□ -1.68
UBE3BQ7Z3V4 AL662791.1-201ENST00000441992 928 ntBASIC4.55□□□□□ -1.68
UBE3BQ7Z3V4 AC132479.1-201ENST00000449160 144 ntBASIC4.55□□□□□ -1.68
UBE3BQ7Z3V4 AL162388.1-201ENST00000450912 352 ntBASIC4.55□□□□□ -1.68
UBE3BQ7Z3V4 SNORD105B-201ENST00000458770 79 ntBASIC4.55□□□□□ -1.68
UBE3BQ7Z3V4 PLGLA-201ENST00000465668 449 ntBASIC4.55□□□□□ -1.68
UBE3BQ7Z3V4 THAP6-203ENST00000502620 582 ntTSL 3 BASIC4.55□□□□□ -1.68
UBE3BQ7Z3V4 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC4.55□□□□□ -1.68
UBE3BQ7Z3V4 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC4.55□□□□□ -1.68
UBE3BQ7Z3V4 AC110792.2-201ENST00000510278 224 ntBASIC4.55□□□□□ -1.68
UBE3BQ7Z3V4 AC010493.1-201ENST00000513479 292 ntBASIC4.55□□□□□ -1.68
UBE3BQ7Z3V4 AC016065.2-201ENST00000514530 444 ntBASIC4.55□□□□□ -1.68
UBE3BQ7Z3V4 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
UBE3BQ7Z3V4 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC4.55□□□□□ -1.68
UBE3BQ7Z3V4 AK6P1-201ENST00000540219 478 ntBASIC4.55□□□□□ -1.68
UBE3BQ7Z3V4 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC4.55□□□□□ -1.68
UBE3BQ7Z3V4 AL157687.1-201ENST00000554853 619 ntBASIC4.55□□□□□ -1.68
UBE3BQ7Z3V4 AL121579.1-201ENST00000555129 305 ntBASIC4.55□□□□□ -1.68
UBE3BQ7Z3V4 AL161713.1-201ENST00000555538 145 ntBASIC4.55□□□□□ -1.68
UBE3BQ7Z3V4 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC4.55□□□□□ -1.68
UBE3BQ7Z3V4 MIR3944-201ENST00000581277 108 ntBASIC4.55□□□□□ -1.68
UBE3BQ7Z3V4 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.55□□□□□ -1.68
UBE3BQ7Z3V4 AP000907.4-201ENST00000604143 237 ntBASIC4.55□□□□□ -1.68
UBE3BQ7Z3V4 BRDTP1-201ENST00000605735 677 ntBASIC4.55□□□□□ -1.68
UBE3BQ7Z3V4 AC084757.4-201ENST00000616350 526 ntBASIC4.55□□□□□ -1.68
UBE3BQ7Z3V4 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
UBE3BQ7Z3V4 AC006338.1-201ENST00000618453 749 ntBASIC4.55□□□□□ -1.68
UBE3BQ7Z3V4 MIR6715B-201ENST00000637172 77 ntBASIC4.55□□□□□ -1.68
UBE3BQ7Z3V4 ABBA01000935.2-201ENST00000637477 838 ntBASIC4.55□□□□□ -1.68
UBE3BQ7Z3V4 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
UBE3BQ7Z3V4 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
UBE3BQ7Z3V4 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.54□□□□□ -1.68
UBE3BQ7Z3V4 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.54□□□□□ -1.68
UBE3BQ7Z3V4 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
UBE3BQ7Z3V4 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
UBE3BQ7Z3V4 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
UBE3BQ7Z3V4 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.54□□□□□ -1.68
UBE3BQ7Z3V4 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
UBE3BQ7Z3V4 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
UBE3BQ7Z3V4 Y_RNA.1-201ENST00000352915 104 ntBASIC4.54□□□□□ -1.68
UBE3BQ7Z3V4 RNU6-878P-201ENST00000384578 110 ntBASIC4.54□□□□□ -1.68
UBE3BQ7Z3V4 MIR490-201ENST00000384865 128 ntBASIC4.54□□□□□ -1.68
UBE3BQ7Z3V4 RPS3AP24-201ENST00000407896 734 ntBASIC4.54□□□□□ -1.68
UBE3BQ7Z3V4 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
UBE3BQ7Z3V4 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC4.54□□□□□ -1.68
UBE3BQ7Z3V4 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC4.54□□□□□ -1.68
UBE3BQ7Z3V4 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC4.54□□□□□ -1.68
UBE3BQ7Z3V4 MTCO2P11-201ENST00000431069 680 ntBASIC4.54□□□□□ -1.68
UBE3BQ7Z3V4 ATP5HP2-201ENST00000433885 485 ntBASIC4.54□□□□□ -1.68
UBE3BQ7Z3V4 AC073063.1-201ENST00000434352 607 ntBASIC4.54□□□□□ -1.68
UBE3BQ7Z3V4 PRDX3P3-201ENST00000447765 522 ntBASIC4.54□□□□□ -1.68
UBE3BQ7Z3V4 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms