Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
NUP54Q7Z3B4 AC058791.1-201ENST00000608412 3198 ntBASIC3.36□□□□□ -1.87
NUP54Q7Z3B4 RNA5SP51-201ENST00000364750 119 ntBASIC3.36□□□□□ -1.87
NUP54Q7Z3B4 SNORA62.3-201ENST00000365110 153 ntBASIC3.36□□□□□ -1.87
NUP54Q7Z3B4 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.36□□□□□ -1.87
NUP54Q7Z3B4 MIR200C-201ENST00000384980 68 ntBASIC3.36□□□□□ -1.87
NUP54Q7Z3B4 RNU6-1197P-201ENST00000391183 107 ntBASIC3.36□□□□□ -1.87
NUP54Q7Z3B4 AL391417.1-201ENST00000404100 426 ntBASIC3.36□□□□□ -1.87
NUP54Q7Z3B4 HSFY4P-201ENST00000415994 1181 ntBASIC3.36□□□□□ -1.87
NUP54Q7Z3B4 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.36□□□□□ -1.87
NUP54Q7Z3B4 BX842559.1-201ENST00000419615 532 ntBASIC3.36□□□□□ -1.87
NUP54Q7Z3B4 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.36□□□□□ -1.87
NUP54Q7Z3B4 RPS27AP14-201ENST00000422868 454 ntBASIC3.36□□□□□ -1.87
NUP54Q7Z3B4 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC3.36□□□□□ -1.87
NUP54Q7Z3B4 RPL7P46-201ENST00000425129 740 ntBASIC3.36□□□□□ -1.87
NUP54Q7Z3B4 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC3.36□□□□□ -1.87
NUP54Q7Z3B4 SUN3-208ENST00000453192 801 ntTSL 5 BASIC3.36□□□□□ -1.87
NUP54Q7Z3B4 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC3.36□□□□□ -1.87
NUP54Q7Z3B4 SNORD105B-201ENST00000458770 79 ntBASIC3.36□□□□□ -1.87
NUP54Q7Z3B4 RPL7P5-201ENST00000471472 736 ntBASIC3.36□□□□□ -1.87
NUP54Q7Z3B4 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.36□□□□□ -1.87
NUP54Q7Z3B4 SETP11-201ENST00000473027 690 ntBASIC3.36□□□□□ -1.87
NUP54Q7Z3B4 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.36□□□□□ -1.87
NUP54Q7Z3B4 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.36□□□□□ -1.87
NUP54Q7Z3B4 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC3.36□□□□□ -1.87
NUP54Q7Z3B4 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC3.36□□□□□ -1.87
NUP54Q7Z3B4 RN7SKP18-201ENST00000516005 275 ntBASIC3.36□□□□□ -1.87
NUP54Q7Z3B4 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.36□□□□□ -1.87
NUP54Q7Z3B4 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
NUP54Q7Z3B4 TRMT10BP1-201ENST00000519377 943 ntBASIC3.36□□□□□ -1.87
NUP54Q7Z3B4 RANP9-201ENST00000519957 271 ntBASIC3.36□□□□□ -1.87
NUP54Q7Z3B4 AC007991.1-201ENST00000522680 631 ntBASIC3.36□□□□□ -1.87
NUP54Q7Z3B4 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC3.36□□□□□ -1.87
NUP54Q7Z3B4 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC3.36□□□□□ -1.87
NUP54Q7Z3B4 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC3.36□□□□□ -1.87
NUP54Q7Z3B4 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.36□□□□□ -1.87
NUP54Q7Z3B4 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC3.36□□□□□ -1.87
NUP54Q7Z3B4 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC3.36□□□□□ -1.87
NUP54Q7Z3B4 MIR3609-201ENST00000582661 80 ntBASIC3.36□□□□□ -1.87
NUP54Q7Z3B4 MIR4307-201ENST00000582802 84 ntBASIC3.36□□□□□ -1.87
NUP54Q7Z3B4 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.36□□□□□ -1.87
NUP54Q7Z3B4 WISP1-OT1-201ENST00000602893 642 ntBASIC3.36□□□□□ -1.87
NUP54Q7Z3B4 AP000403.1-201ENST00000603349 851 ntBASIC3.36□□□□□ -1.87
NUP54Q7Z3B4 MIR6130-201ENST00000619419 109 ntBASIC3.36□□□□□ -1.87
NUP54Q7Z3B4 AL732618.1-201ENST00000623251 301 ntBASIC3.36□□□□□ -1.87
NUP54Q7Z3B4 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.36□□□□□ -1.87
NUP54Q7Z3B4 RPS4XP5-202ENST00000449995 1334 ntBASIC3.36□□□□□ -1.87
NUP54Q7Z3B4 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.36□□□□□ -1.87
NUP54Q7Z3B4 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.35□□□□□ -1.87
NUP54Q7Z3B4 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.35□□□□□ -1.87
NUP54Q7Z3B4 ZNF285B-201ENST00000561698 1767 ntBASIC3.35□□□□□ -1.87
NUP54Q7Z3B4 MTCO1P9-201ENST00000505577 1534 ntBASIC3.35□□□□□ -1.87
NUP54Q7Z3B4 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
NUP54Q7Z3B4 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
NUP54Q7Z3B4 RNU6-501P-201ENST00000364072 100 ntBASIC3.35□□□□□ -1.87
NUP54Q7Z3B4 AL359837.1-201ENST00000381357 287 ntBASIC3.35□□□□□ -1.87
NUP54Q7Z3B4 U3.20-201ENST00000390909 217 ntBASIC3.35□□□□□ -1.87
NUP54Q7Z3B4 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.35□□□□□ -1.87
NUP54Q7Z3B4 ATP5A1P2-201ENST00000412323 255 ntBASIC3.35□□□□□ -1.87
NUP54Q7Z3B4 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.35□□□□□ -1.87
NUP54Q7Z3B4 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.35□□□□□ -1.87
NUP54Q7Z3B4 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.35□□□□□ -1.87
NUP54Q7Z3B4 THAP5P1-201ENST00000439089 262 ntBASIC3.35□□□□□ -1.87
NUP54Q7Z3B4 AL512286.1-201ENST00000439244 400 ntBASIC3.35□□□□□ -1.87
NUP54Q7Z3B4 FAM103A2P-201ENST00000444122 354 ntBASIC3.35□□□□□ -1.87
NUP54Q7Z3B4 RPS3AP43-201ENST00000479743 781 ntBASIC3.35□□□□□ -1.87
NUP54Q7Z3B4 RPL30P5-201ENST00000494923 336 ntBASIC3.35□□□□□ -1.87
NUP54Q7Z3B4 PCBP2P3-201ENST00000509726 843 ntBASIC3.35□□□□□ -1.87
NUP54Q7Z3B4 AC010486.3-201ENST00000511602 785 ntBASIC3.35□□□□□ -1.87
NUP54Q7Z3B4 AC106038.2-201ENST00000520706 568 ntBASIC3.35□□□□□ -1.87
NUP54Q7Z3B4 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
NUP54Q7Z3B4 HMGB1P14-201ENST00000557424 591 ntBASIC3.35□□□□□ -1.87
NUP54Q7Z3B4 MTCO3P24-201ENST00000572729 782 ntBASIC3.35□□□□□ -1.87
NUP54Q7Z3B4 MIR3915-201ENST00000578518 97 ntBASIC3.35□□□□□ -1.87
NUP54Q7Z3B4 GLUD1P4-201ENST00000590914 418 ntBASIC3.35□□□□□ -1.87
NUP54Q7Z3B4 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
NUP54Q7Z3B4 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.35□□□□□ -1.87
NUP54Q7Z3B4 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.35□□□□□ -1.87
NUP54Q7Z3B4 AC010591.1-201ENST00000603941 649 ntBASIC3.35□□□□□ -1.87
NUP54Q7Z3B4 AC121247.2-201ENST00000604776 136 ntBASIC3.35□□□□□ -1.87
NUP54Q7Z3B4 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.35□□□□□ -1.87
NUP54Q7Z3B4 AC008443.7-201ENST00000622195 246 ntBASIC3.35□□□□□ -1.87
NUP54Q7Z3B4 AC039056.2-201ENST00000622261 511 ntBASIC3.35□□□□□ -1.87
NUP54Q7Z3B4 AC027309.3-201ENST00000623419 351 ntBASIC3.35□□□□□ -1.87
NUP54Q7Z3B4 AC079597.1-201ENST00000624306 508 ntBASIC3.35□□□□□ -1.87
NUP54Q7Z3B4 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
NUP54Q7Z3B4 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
NUP54Q7Z3B4 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
NUP54Q7Z3B4 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
NUP54Q7Z3B4 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
NUP54Q7Z3B4 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
NUP54Q7Z3B4 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
NUP54Q7Z3B4 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
NUP54Q7Z3B4 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
NUP54Q7Z3B4 FAM35CP-201ENST00000554755 2470 ntBASIC3.34□□□□□ -1.87
NUP54Q7Z3B4 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.34□□□□□ -1.87
NUP54Q7Z3B4 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.34□□□□□ -1.87
NUP54Q7Z3B4 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
NUP54Q7Z3B4 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
NUP54Q7Z3B4 AC009902.3-201ENST00000606235 2172 ntBASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms