Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 OR8B1P-202ENST00000641132 1178 ntBASIC3.19□□□□□ -1.9
C11orf88Q6PI97 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
C11orf88Q6PI97 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
C11orf88Q6PI97 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
C11orf88Q6PI97 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.18□□□□□ -1.9
C11orf88Q6PI97 AP004289.2-201ENST00000444413 1457 ntBASIC3.18□□□□□ -1.9
C11orf88Q6PI97 MTND4P16-201ENST00000466108 1367 ntBASIC3.18□□□□□ -1.9
C11orf88Q6PI97 SNORA72.3-201ENST00000365074 132 ntBASIC3.18□□□□□ -1.9
C11orf88Q6PI97 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC3.18□□□□□ -1.9
C11orf88Q6PI97 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
C11orf88Q6PI97 MIR449B-201ENST00000384995 97 ntBASIC3.18□□□□□ -1.9
C11orf88Q6PI97 ANAPC10P1-201ENST00000395991 556 ntBASIC3.18□□□□□ -1.9
C11orf88Q6PI97 AL109755.1-201ENST00000401791 649 ntBASIC3.18□□□□□ -1.9
C11orf88Q6PI97 AL031121.1-201ENST00000406553 254 ntBASIC3.18□□□□□ -1.9
C11orf88Q6PI97 RPL21P24-201ENST00000413752 448 ntBASIC3.18□□□□□ -1.9
C11orf88Q6PI97 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC3.18□□□□□ -1.9
C11orf88Q6PI97 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC3.18□□□□□ -1.9
C11orf88Q6PI97 AL445669.1-201ENST00000426743 755 ntBASIC3.18□□□□□ -1.9
C11orf88Q6PI97 AL035407.1-201ENST00000429211 571 ntBASIC3.18□□□□□ -1.9
C11orf88Q6PI97 AC018644.1-201ENST00000429934 551 ntBASIC3.18□□□□□ -1.9
C11orf88Q6PI97 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC3.18□□□□□ -1.9
C11orf88Q6PI97 ELOCP30-201ENST00000447108 299 ntBASIC3.18□□□□□ -1.9
C11orf88Q6PI97 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC3.18□□□□□ -1.9
C11orf88Q6PI97 RPS27P26-201ENST00000494583 239 ntBASIC3.18□□□□□ -1.9
C11orf88Q6PI97 AC022447.3-201ENST00000506865 495 ntBASIC3.18□□□□□ -1.9
C11orf88Q6PI97 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC3.18□□□□□ -1.9
C11orf88Q6PI97 SNORA67.7-201ENST00000516664 135 ntBASIC3.18□□□□□ -1.9
C11orf88Q6PI97 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.18□□□□□ -1.9
C11orf88Q6PI97 AP000907.2-201ENST00000530827 353 ntBASIC3.18□□□□□ -1.9
C11orf88Q6PI97 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.18□□□□□ -1.9
C11orf88Q6PI97 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC3.18□□□□□ -1.9
C11orf88Q6PI97 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC3.18□□□□□ -1.9
C11orf88Q6PI97 RN7SL703P-201ENST00000578485 302 ntBASIC3.18□□□□□ -1.9
C11orf88Q6PI97 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.18□□□□□ -1.9
C11orf88Q6PI97 AC007038.2-201ENST00000608095 740 ntBASIC3.18□□□□□ -1.9
C11orf88Q6PI97 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.18□□□□□ -1.9
C11orf88Q6PI97 AC004696.1-201ENST00000614345 607 ntBASIC3.18□□□□□ -1.9
C11orf88Q6PI97 AC068880.5-201ENST00000624331 290 ntBASIC3.18□□□□□ -1.9
C11orf88Q6PI97 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.18□□□□□ -1.9
C11orf88Q6PI97 ZNF736P9Y-201ENST00000439586 1345 ntBASIC3.18□□□□□ -1.9
C11orf88Q6PI97 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
C11orf88Q6PI97 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.17□□□□□ -1.9
C11orf88Q6PI97 MTND5P27-201ENST00000428871 1720 ntBASIC3.17□□□□□ -1.9
C11orf88Q6PI97 RNU1-105P-201ENST00000363470 161 ntBASIC3.17□□□□□ -1.9
C11orf88Q6PI97 RNA5SP399-201ENST00000364003 117 ntBASIC3.17□□□□□ -1.9
C11orf88Q6PI97 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC3.17□□□□□ -1.9
C11orf88Q6PI97 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.17□□□□□ -1.9
C11orf88Q6PI97 RNU6-213P-201ENST00000384051 104 ntBASIC3.17□□□□□ -1.9
C11orf88Q6PI97 RNU6-140P-201ENST00000384566 108 ntBASIC3.17□□□□□ -1.9
C11orf88Q6PI97 MIR199A2-201ENST00000385289 110 ntBASIC3.17□□□□□ -1.9
C11orf88Q6PI97 AL513331.1-201ENST00000411908 397 ntBASIC3.17□□□□□ -1.9
C11orf88Q6PI97 AL451054.2-201ENST00000420896 202 ntBASIC3.17□□□□□ -1.9
C11orf88Q6PI97 AL353678.1-201ENST00000422735 741 ntBASIC3.17□□□□□ -1.9
C11orf88Q6PI97 HMGN2P30-201ENST00000423237 256 ntBASIC3.17□□□□□ -1.9
C11orf88Q6PI97 AL022400.1-201ENST00000423946 935 ntBASIC3.17□□□□□ -1.9
C11orf88Q6PI97 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC3.17□□□□□ -1.9
C11orf88Q6PI97 ZNF863P-201ENST00000426746 417 ntBASIC3.17□□□□□ -1.9
C11orf88Q6PI97 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.17□□□□□ -1.9
C11orf88Q6PI97 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
C11orf88Q6PI97 FTH1P1-201ENST00000437933 532 ntBASIC3.17□□□□□ -1.9
C11orf88Q6PI97 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.17□□□□□ -1.9
C11orf88Q6PI97 RPS29P7-201ENST00000439662 171 ntBASIC3.17□□□□□ -1.9
C11orf88Q6PI97 MTCO3P45-201ENST00000443036 613 ntBASIC3.17□□□□□ -1.9
C11orf88Q6PI97 Z96811.1-201ENST00000445880 108 ntBASIC3.17□□□□□ -1.9
C11orf88Q6PI97 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.17□□□□□ -1.9
C11orf88Q6PI97 RN7SL542P-201ENST00000467147 294 ntBASIC3.17□□□□□ -1.9
C11orf88Q6PI97 AC084198.1-201ENST00000477747 402 ntBASIC3.17□□□□□ -1.9
C11orf88Q6PI97 AC034244.1-201ENST00000507687 207 ntBASIC3.17□□□□□ -1.9
C11orf88Q6PI97 MTND2P32-201ENST00000521584 1038 ntBASIC3.17□□□□□ -1.9
C11orf88Q6PI97 AP004247.1-201ENST00000531556 1289 ntBASIC3.17□□□□□ -1.9
C11orf88Q6PI97 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.17□□□□□ -1.9
C11orf88Q6PI97 AHI1-217ENST00000534469 680 ntTSL 3 BASIC3.17□□□□□ -1.9
C11orf88Q6PI97 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC3.17□□□□□ -1.9
C11orf88Q6PI97 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC3.17□□□□□ -1.9
C11orf88Q6PI97 AC006960.3-201ENST00000561845 705 ntBASIC3.17□□□□□ -1.9
C11orf88Q6PI97 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.17□□□□□ -1.9
C11orf88Q6PI97 MIR3944-201ENST00000581277 108 ntBASIC3.17□□□□□ -1.9
C11orf88Q6PI97 AC006504.3-201ENST00000586818 523 ntBASIC3.17□□□□□ -1.9
C11orf88Q6PI97 MTND4LP5-201ENST00000605152 292 ntBASIC3.17□□□□□ -1.9
C11orf88Q6PI97 AC024560.3-201ENST00000608482 349 ntBASIC3.17□□□□□ -1.9
C11orf88Q6PI97 AC004908.2-201ENST00000609090 574 ntBASIC3.17□□□□□ -1.9
C11orf88Q6PI97 AC005344.1-201ENST00000613391 459 ntBASIC3.17□□□□□ -1.9
C11orf88Q6PI97 AL050303.3-201ENST00000613704 284 ntBASIC3.17□□□□□ -1.9
C11orf88Q6PI97 UCA1.1-201ENST00000620952 75 ntBASIC3.17□□□□□ -1.9
C11orf88Q6PI97 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.17□□□□□ -1.9
C11orf88Q6PI97 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC3.17□□□□□ -1.9
C11orf88Q6PI97 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
C11orf88Q6PI97 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
C11orf88Q6PI97 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.17□□□□□ -1.9
C11orf88Q6PI97 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.17□□□□□ -1.9
C11orf88Q6PI97 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
C11orf88Q6PI97 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
C11orf88Q6PI97 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
C11orf88Q6PI97 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
C11orf88Q6PI97 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
C11orf88Q6PI97 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.16□□□□□ -1.9
C11orf88Q6PI97 RNU6-433P-201ENST00000363216 104 ntBASIC3.16□□□□□ -1.9
C11orf88Q6PI97 RNU6-931P-201ENST00000363850 107 ntBASIC3.16□□□□□ -1.9
C11orf88Q6PI97 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
C11orf88Q6PI97 SNORA3.3-201ENST00000408712 125 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms