Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC2.63□□□□□ -1.99
RFX4Q33E94 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC2.63□□□□□ -1.99
RFX4Q33E94 AL391262.2-201ENST00000622466 494 ntBASIC2.63□□□□□ -1.99
RFX4Q33E94 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC2.63□□□□□ -1.99
RFX4Q33E94 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC2.63□□□□□ -1.99
RFX4Q33E94 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
RFX4Q33E94 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.63□□□□□ -1.99
RFX4Q33E94 AP003122.5-201ENST00000527668 3766 ntBASIC2.62□□□□□ -1.99
RFX4Q33E94 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.62□□□□□ -1.99
RFX4Q33E94 RNU6-343P-201ENST00000364709 104 ntBASIC2.62□□□□□ -1.99
RFX4Q33E94 RNU2-47P-201ENST00000410649 186 ntBASIC2.62□□□□□ -1.99
RFX4Q33E94 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.62□□□□□ -1.99
RFX4Q33E94 AL389915.1-201ENST00000422463 466 ntBASIC2.62□□□□□ -1.99
RFX4Q33E94 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC2.62□□□□□ -1.99
RFX4Q33E94 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.62□□□□□ -1.99
RFX4Q33E94 MTCYBP45-201ENST00000435243 565 ntBASIC2.62□□□□□ -1.99
RFX4Q33E94 MTCYBP34-201ENST00000439552 670 ntBASIC2.62□□□□□ -1.99
RFX4Q33E94 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC2.62□□□□□ -1.99
RFX4Q33E94 MRPL50P4-201ENST00000446432 475 ntBASIC2.62□□□□□ -1.99
RFX4Q33E94 Z82190.1-201ENST00000454534 490 ntBASIC2.62□□□□□ -1.99
RFX4Q33E94 RPS29P12-201ENST00000460178 152 ntBASIC2.62□□□□□ -1.99
RFX4Q33E94 RPL27AP5-201ENST00000469428 449 ntBASIC2.62□□□□□ -1.99
RFX4Q33E94 RPS3AP43-201ENST00000479743 781 ntBASIC2.62□□□□□ -1.99
RFX4Q33E94 UBE2Q2P9-201ENST00000490086 202 ntBASIC2.62□□□□□ -1.99
RFX4Q33E94 OR2A20P-203ENST00000498397 1268 ntBASIC2.62□□□□□ -1.99
RFX4Q33E94 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC2.62□□□□□ -1.99
RFX4Q33E94 AC008885.1-201ENST00000514930 301 ntBASIC2.62□□□□□ -1.99
RFX4Q33E94 SNORA31.8-201ENST00000516327 108 ntBASIC2.62□□□□□ -1.99
RFX4Q33E94 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC2.62□□□□□ -1.99
RFX4Q33E94 SETP7-201ENST00000552169 453 ntBASIC2.62□□□□□ -1.99
RFX4Q33E94 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC2.62□□□□□ -1.99
RFX4Q33E94 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC2.62□□□□□ -1.99
RFX4Q33E94 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC2.62□□□□□ -1.99
RFX4Q33E94 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC2.62□□□□□ -1.99
RFX4Q33E94 BNIP3P33-201ENST00000598912 569 ntBASIC2.62□□□□□ -1.99
RFX4Q33E94 RPP40P2-201ENST00000603596 712 ntBASIC2.62□□□□□ -1.99
RFX4Q33E94 AC015871.2-201ENST00000603605 948 ntBASIC2.62□□□□□ -1.99
RFX4Q33E94 DUXAP3-201ENST00000603616 594 ntBASIC2.62□□□□□ -1.99
RFX4Q33E94 AP000787.2-201ENST00000604432 568 ntBASIC2.62□□□□□ -1.99
RFX4Q33E94 AC106791.2-201ENST00000604680 391 ntBASIC2.62□□□□□ -1.99
RFX4Q33E94 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC2.62□□□□□ -1.99
RFX4Q33E94 AC009974.1-201ENST00000608881 455 ntBASIC2.62□□□□□ -1.99
RFX4Q33E94 AC131235.4-201ENST00000609288 620 ntBASIC2.62□□□□□ -1.99
RFX4Q33E94 AC069200.1-201ENST00000609511 323 ntBASIC2.62□□□□□ -1.99
RFX4Q33E94 BX664608.1-201ENST00000610519 487 ntBASIC2.62□□□□□ -1.99
RFX4Q33E94 AC016597.2-201ENST00000613256 341 ntBASIC2.62□□□□□ -1.99
RFX4Q33E94 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC2.62□□□□□ -1.99
RFX4Q33E94 AC244100.1-202ENST00000621554 382 ntBASIC2.62□□□□□ -1.99
RFX4Q33E94 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
RFX4Q33E94 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC2.61□□□□□ -1.99
RFX4Q33E94 AC090740.1-201ENST00000623193 2262 ntBASIC2.61□□□□□ -1.99
RFX4Q33E94 RNU6-1155P-201ENST00000363554 107 ntBASIC2.61□□□□□ -1.99
RFX4Q33E94 SNORA38.1-201ENST00000364172 131 ntBASIC2.61□□□□□ -1.99
RFX4Q33E94 RNU6-621P-201ENST00000364752 109 ntBASIC2.61□□□□□ -1.99
RFX4Q33E94 Y_RNA.548-201ENST00000384656 105 ntBASIC2.61□□□□□ -1.99
RFX4Q33E94 RNU6-906P-201ENST00000384700 70 ntBASIC2.61□□□□□ -1.99
RFX4Q33E94 RPL23AP29-201ENST00000397284 453 ntBASIC2.61□□□□□ -1.99
RFX4Q33E94 CYCSP45-201ENST00000402289 315 ntBASIC2.61□□□□□ -1.99
RFX4Q33E94 HMGN2P35-201ENST00000412164 270 ntBASIC2.61□□□□□ -1.99
RFX4Q33E94 B3GALNT1P1-201ENST00000420569 975 ntBASIC2.61□□□□□ -1.99
RFX4Q33E94 HMGN2P30-201ENST00000423237 256 ntBASIC2.61□□□□□ -1.99
RFX4Q33E94 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.61□□□□□ -1.99
RFX4Q33E94 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC2.61□□□□□ -1.99
RFX4Q33E94 AL645638.1-201ENST00000440519 361 ntBASIC2.61□□□□□ -1.99
RFX4Q33E94 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC2.61□□□□□ -1.99
RFX4Q33E94 Z96811.1-201ENST00000445880 108 ntBASIC2.61□□□□□ -1.99
RFX4Q33E94 MTCO2P25-201ENST00000447065 681 ntBASIC2.61□□□□□ -1.99
RFX4Q33E94 AL353691.1-201ENST00000451332 387 ntBASIC2.61□□□□□ -1.99
RFX4Q33E94 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC2.61□□□□□ -1.99
RFX4Q33E94 AC092155.2-201ENST00000454675 477 ntBASIC2.61□□□□□ -1.99
RFX4Q33E94 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC2.61□□□□□ -1.99
RFX4Q33E94 SUMO2P2-201ENST00000456482 255 ntBASIC2.61□□□□□ -1.99
RFX4Q33E94 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC2.61□□□□□ -1.99
RFX4Q33E94 AC034236.1-201ENST00000469891 373 ntBASIC2.61□□□□□ -1.99
RFX4Q33E94 AC003982.1-202ENST00000469928 248 ntBASIC2.61□□□□□ -1.99
RFX4Q33E94 RPL7P49-201ENST00000471402 708 ntBASIC2.61□□□□□ -1.99
RFX4Q33E94 AC023424.2-201ENST00000493479 777 ntBASIC2.61□□□□□ -1.99
RFX4Q33E94 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC2.61□□□□□ -1.99
RFX4Q33E94 RN7SL504P-201ENST00000494496 287 ntBASIC2.61□□□□□ -1.99
RFX4Q33E94 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC2.61□□□□□ -1.99
RFX4Q33E94 COX7A2P2-201ENST00000505291 250 ntBASIC2.61□□□□□ -1.99
RFX4Q33E94 SLC25A15P5-201ENST00000508033 253 ntBASIC2.61□□□□□ -1.99
RFX4Q33E94 XKRY-201ENST00000510392 1100 ntBASIC2.61□□□□□ -1.99
RFX4Q33E94 AC010625.1-201ENST00000511296 403 ntBASIC2.61□□□□□ -1.99
RFX4Q33E94 AC093677.1-201ENST00000514414 678 ntBASIC2.61□□□□□ -1.99
RFX4Q33E94 HSPA8P13-201ENST00000523715 472 ntBASIC2.61□□□□□ -1.99
RFX4Q33E94 PSMA2P1-201ENST00000526365 646 ntBASIC2.61□□□□□ -1.99
RFX4Q33E94 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC2.61□□□□□ -1.99
RFX4Q33E94 SNRPGP16-201ENST00000533275 226 ntBASIC2.61□□□□□ -1.99
RFX4Q33E94 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC2.61□□□□□ -1.99
RFX4Q33E94 AL133271.1-201ENST00000538229 291 ntBASIC2.61□□□□□ -1.99
RFX4Q33E94 AL132857.1-201ENST00000555180 708 ntBASIC2.61□□□□□ -1.99
RFX4Q33E94 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC2.61□□□□□ -1.99
RFX4Q33E94 MTND1P8-201ENST00000571424 950 ntBASIC2.61□□□□□ -1.99
RFX4Q33E94 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC2.61□□□□□ -1.99
RFX4Q33E94 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.61□□□□□ -1.99
RFX4Q33E94 MTCO2P2-201ENST00000591258 225 ntBASIC2.61□□□□□ -1.99
RFX4Q33E94 AC005046.1-201ENST00000608515 625 ntBASIC2.61□□□□□ -1.99
RFX4Q33E94 MIR6076-201ENST00000617521 113 ntBASIC2.61□□□□□ -1.99
RFX4Q33E94 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.61□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms