Protein–RNA interactions for Protein: Q15878

CACNA1E, Voltage-dependent R-type calcium channel subunit alpha-1E, humanhuman

Predictions only

Length 2,313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1EQ15878 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC1.57□□□□□ -2.16
CACNA1EQ15878 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC1.57□□□□□ -2.16
CACNA1EQ15878 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
CACNA1EQ15878 MCTS2P-201ENST00000394552 546 ntBASIC1.57□□□□□ -2.16
CACNA1EQ15878 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC1.57□□□□□ -2.16
CACNA1EQ15878 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC1.57□□□□□ -2.16
CACNA1EQ15878 Z99714.1-201ENST00000450463 807 ntBASIC1.57□□□□□ -2.16
CACNA1EQ15878 RPL7P5-201ENST00000471472 736 ntBASIC1.57□□□□□ -2.16
CACNA1EQ15878 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC1.57□□□□□ -2.16
CACNA1EQ15878 AC109464.2-201ENST00000510242 943 ntBASIC1.57□□□□□ -2.16
CACNA1EQ15878 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC1.57□□□□□ -2.16
CACNA1EQ15878 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC1.57□□□□□ -2.16
CACNA1EQ15878 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC1.57□□□□□ -2.16
CACNA1EQ15878 AC092159.4-201ENST00000624944 550 ntBASIC1.57□□□□□ -2.16
CACNA1EQ15878 RNU6-225P-201ENST00000384613 103 ntBASIC1.56□□□□□ -2.16
CACNA1EQ15878 CCNB2P1-201ENST00000399411 1150 ntBASIC1.56□□□□□ -2.16
CACNA1EQ15878 HSPE1P1-201ENST00000421494 318 ntBASIC1.56□□□□□ -2.16
CACNA1EQ15878 DPPA2P1-201ENST00000428060 556 ntBASIC1.56□□□□□ -2.16
CACNA1EQ15878 USP9YP10-201ENST00000454868 628 ntBASIC1.56□□□□□ -2.16
CACNA1EQ15878 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
CACNA1EQ15878 ATG10-AS1-201ENST00000504846 648 ntBASIC1.56□□□□□ -2.16
CACNA1EQ15878 MIR4421-201ENST00000578133 69 ntBASIC1.56□□□□□ -2.16
CACNA1EQ15878 AL133393.1-201ENST00000603277 287 ntBASIC1.56□□□□□ -2.16
CACNA1EQ15878 AC018754.1-201ENST00000607486 925 ntBASIC1.56□□□□□ -2.16
CACNA1EQ15878 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC1.56□□□□□ -2.16
CACNA1EQ15878 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC1.56□□□□□ -2.16
CACNA1EQ15878 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC1.56□□□□□ -2.16
CACNA1EQ15878 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC1.56□□□□□ -2.16
CACNA1EQ15878 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.56□□□□□ -2.16
CACNA1EQ15878 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC1.56□□□□□ -2.16
CACNA1EQ15878 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.56□□□□□ -2.16
CACNA1EQ15878 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC1.56□□□□□ -2.16
CACNA1EQ15878 SNORA31.26-201ENST00000517250 137 ntBASIC1.56□□□□□ -2.16
CACNA1EQ15878 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC1.56□□□□□ -2.16
CACNA1EQ15878 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC1.56□□□□□ -2.16
CACNA1EQ15878 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC1.56□□□□□ -2.16
CACNA1EQ15878 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC1.56□□□□□ -2.16
CACNA1EQ15878 AP001029.3-201ENST00000588063 596 ntBASIC1.56□□□□□ -2.16
CACNA1EQ15878 RNU6-1032P-201ENST00000384100 107 ntBASIC1.55□□□□□ -2.16
CACNA1EQ15878 TRAPPC2P9-201ENST00000434556 343 ntBASIC1.55□□□□□ -2.16
CACNA1EQ15878 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC1.55□□□□□ -2.16
CACNA1EQ15878 AC078918.1-201ENST00000498515 228 ntBASIC1.55□□□□□ -2.16
CACNA1EQ15878 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC1.55□□□□□ -2.16
CACNA1EQ15878 AC010627.1-201ENST00000503819 1294 ntBASIC1.55□□□□□ -2.16
CACNA1EQ15878 HMGB1P47-201ENST00000511281 589 ntBASIC1.55□□□□□ -2.16
CACNA1EQ15878 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC1.55□□□□□ -2.16
CACNA1EQ15878 AL137100.2-201ENST00000555786 315 ntBASIC1.55□□□□□ -2.16
CACNA1EQ15878 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC1.55□□□□□ -2.16
CACNA1EQ15878 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC1.55□□□□□ -2.16
CACNA1EQ15878 AL136133.1-201ENST00000413694 376 ntBASIC1.55□□□□□ -2.16
CACNA1EQ15878 MTND2P16-201ENST00000419987 799 ntBASIC1.55□□□□□ -2.16
CACNA1EQ15878 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.55□□□□□ -2.16
CACNA1EQ15878 AC090071.1-201ENST00000507713 644 ntBASIC1.55□□□□□ -2.16
CACNA1EQ15878 MTND5P4-201ENST00000514978 288 ntBASIC1.55□□□□□ -2.16
CACNA1EQ15878 AC011468.4-201ENST00000603942 409 ntBASIC1.55□□□□□ -2.16
CACNA1EQ15878 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.54□□□□□ -2.16
CACNA1EQ15878 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
CACNA1EQ15878 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC1.54□□□□□ -2.16
CACNA1EQ15878 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC1.54□□□□□ -2.16
CACNA1EQ15878 RNU2-58P-201ENST00000516403 183 ntBASIC1.54□□□□□ -2.16
CACNA1EQ15878 RNU6-347P-201ENST00000516658 105 ntBASIC1.54□□□□□ -2.16
CACNA1EQ15878 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC1.54□□□□□ -2.16
CACNA1EQ15878 AC239860.2-201ENST00000525886 270 ntBASIC1.54□□□□□ -2.16
CACNA1EQ15878 AP004242.1-201ENST00000533701 349 ntBASIC1.54□□□□□ -2.16
CACNA1EQ15878 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC1.54□□□□□ -2.16
CACNA1EQ15878 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC1.54□□□□□ -2.16
CACNA1EQ15878 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC1.54□□□□□ -2.16
CACNA1EQ15878 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
CACNA1EQ15878 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC1.54□□□□□ -2.16
CACNA1EQ15878 CUL4AP1-201ENST00000514750 1863 ntBASIC1.54□□□□□ -2.16
CACNA1EQ15878 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC1.54□□□□□ -2.16
CACNA1EQ15878 BLOC1S2P1-201ENST00000428431 301 ntBASIC1.54□□□□□ -2.16
CACNA1EQ15878 AL513321.1-201ENST00000441175 761 ntBASIC1.54□□□□□ -2.16
CACNA1EQ15878 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
CACNA1EQ15878 AC034244.1-201ENST00000507687 207 ntBASIC1.54□□□□□ -2.16
CACNA1EQ15878 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.54□□□□□ -2.16
CACNA1EQ15878 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC1.54□□□□□ -2.16
CACNA1EQ15878 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC1.54□□□□□ -2.16
CACNA1EQ15878 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC1.54□□□□□ -2.16
CACNA1EQ15878 AL353770.2-201ENST00000620024 78 ntBASIC1.54□□□□□ -2.16
CACNA1EQ15878 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC1.53□□□□□ -2.16
CACNA1EQ15878 RNU6-60P-201ENST00000364792 103 ntBASIC1.53□□□□□ -2.16
CACNA1EQ15878 RNU6-53P-201ENST00000365367 106 ntBASIC1.53□□□□□ -2.16
CACNA1EQ15878 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC1.53□□□□□ -2.16
CACNA1EQ15878 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC1.53□□□□□ -2.16
CACNA1EQ15878 RPL17P12-201ENST00000413391 526 ntBASIC1.53□□□□□ -2.16
CACNA1EQ15878 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC1.53□□□□□ -2.16
CACNA1EQ15878 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC1.53□□□□□ -2.16
CACNA1EQ15878 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC1.53□□□□□ -2.16
CACNA1EQ15878 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
CACNA1EQ15878 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC1.53□□□□□ -2.16
CACNA1EQ15878 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC1.53□□□□□ -2.16
CACNA1EQ15878 RNU6-56P-201ENST00000516986 93 ntBASIC1.53□□□□□ -2.16
CACNA1EQ15878 AP002748.2-201ENST00000528671 348 ntBASIC1.53□□□□□ -2.16
CACNA1EQ15878 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC1.53□□□□□ -2.16
CACNA1EQ15878 MIR151B-201ENST00000584249 96 ntBASIC1.53□□□□□ -2.16
CACNA1EQ15878 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC1.53□□□□□ -2.16
CACNA1EQ15878 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
CACNA1EQ15878 AC104307.1-201ENST00000616142 196 ntBASIC1.53□□□□□ -2.16
CACNA1EQ15878 AL589935.2-201ENST00000616471 1231 ntBASIC1.53□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 147.7 ms