Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 AC005726.1-201ENST00000494679 427 ntBASIC3.62□□□□□ -1.83
LTBQ06643 AC010493.1-201ENST00000513479 292 ntBASIC3.62□□□□□ -1.83
LTBQ06643 RNU6-714P-201ENST00000516963 103 ntBASIC3.62□□□□□ -1.83
LTBQ06643 RNU6-201P-201ENST00000517100 61 ntBASIC3.62□□□□□ -1.83
LTBQ06643 AC022616.6-201ENST00000520479 119 ntBASIC3.62□□□□□ -1.83
LTBQ06643 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.62□□□□□ -1.83
LTBQ06643 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
LTBQ06643 AC123904.2-201ENST00000548059 300 ntBASIC3.62□□□□□ -1.83
LTBQ06643 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC3.62□□□□□ -1.83
LTBQ06643 MIR4504-201ENST00000577413 92 ntBASIC3.62□□□□□ -1.83
LTBQ06643 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC3.62□□□□□ -1.83
LTBQ06643 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC3.62□□□□□ -1.83
LTBQ06643 AC055876.5-201ENST00000605667 259 ntBASIC3.62□□□□□ -1.83
LTBQ06643 AL158211.4-201ENST00000606988 584 ntBASIC3.62□□□□□ -1.83
LTBQ06643 MIR6864-201ENST00000617935 70 ntBASIC3.62□□□□□ -1.83
LTBQ06643 AC004009.2-201ENST00000623016 728 ntBASIC3.62□□□□□ -1.83
LTBQ06643 AC139792.3-201ENST00000623525 224 ntBASIC3.62□□□□□ -1.83
LTBQ06643 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.62□□□□□ -1.83
LTBQ06643 MIR6715B-201ENST00000637172 77 ntBASIC3.62□□□□□ -1.83
LTBQ06643 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.62□□□□□ -1.83
LTBQ06643 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
LTBQ06643 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
LTBQ06643 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
LTBQ06643 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.62□□□□□ -1.83
LTBQ06643 AC024560.2-201ENST00000507981 1497 ntBASIC3.61□□□□□ -1.83
LTBQ06643 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC3.61□□□□□ -1.83
LTBQ06643 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
LTBQ06643 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
LTBQ06643 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
LTBQ06643 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
LTBQ06643 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
LTBQ06643 CBX3P1-201ENST00000325243 554 ntBASIC3.61□□□□□ -1.83
LTBQ06643 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC3.61□□□□□ -1.83
LTBQ06643 SNORA60-201ENST00000362396 134 ntBASIC3.61□□□□□ -1.83
LTBQ06643 Y_RNA.61-201ENST00000362835 102 ntBASIC3.61□□□□□ -1.83
LTBQ06643 RNA5SP322-201ENST00000363617 119 ntBASIC3.61□□□□□ -1.83
LTBQ06643 Y_RNA.159-201ENST00000363674 87 ntBASIC3.61□□□□□ -1.83
LTBQ06643 RNU6-853P-201ENST00000364306 107 ntBASIC3.61□□□□□ -1.83
LTBQ06643 SNORA73.2-201ENST00000364946 201 ntBASIC3.61□□□□□ -1.83
LTBQ06643 RAB9AP3-201ENST00000412737 573 ntBASIC3.61□□□□□ -1.83
LTBQ06643 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.61□□□□□ -1.83
LTBQ06643 AC068533.1-201ENST00000418542 415 ntBASIC3.61□□□□□ -1.83
LTBQ06643 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC3.61□□□□□ -1.83
LTBQ06643 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC3.61□□□□□ -1.83
LTBQ06643 AC133104.1-201ENST00000429100 218 ntBASIC3.61□□□□□ -1.83
LTBQ06643 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.61□□□□□ -1.83
LTBQ06643 RPL23AP74-201ENST00000437246 471 ntBASIC3.61□□□□□ -1.83
LTBQ06643 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.61□□□□□ -1.83
LTBQ06643 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC3.61□□□□□ -1.83
LTBQ06643 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.61□□□□□ -1.83
LTBQ06643 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC3.61□□□□□ -1.83
LTBQ06643 RAB9AP1-201ENST00000449393 573 ntBASIC3.61□□□□□ -1.83
LTBQ06643 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC3.61□□□□□ -1.83
LTBQ06643 MTND1P12-201ENST00000455231 147 ntBASIC3.61□□□□□ -1.83
LTBQ06643 TRBV26-201ENST00000456572 344 ntBASIC3.61□□□□□ -1.83
LTBQ06643 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC3.61□□□□□ -1.83
LTBQ06643 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC3.61□□□□□ -1.83
LTBQ06643 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC3.61□□□□□ -1.83
LTBQ06643 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC3.61□□□□□ -1.83
LTBQ06643 AC090281.1-201ENST00000523019 276 ntBASIC3.61□□□□□ -1.83
LTBQ06643 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC3.61□□□□□ -1.83
LTBQ06643 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC3.61□□□□□ -1.83
LTBQ06643 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC3.61□□□□□ -1.83
LTBQ06643 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC3.61□□□□□ -1.83
LTBQ06643 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.61□□□□□ -1.83
LTBQ06643 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC3.61□□□□□ -1.83
LTBQ06643 GNRHR2P1-201ENST00000555315 631 ntBASIC3.61□□□□□ -1.83
LTBQ06643 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC3.61□□□□□ -1.83
LTBQ06643 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC3.61□□□□□ -1.83
LTBQ06643 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC3.61□□□□□ -1.83
LTBQ06643 AC060780.3-201ENST00000589464 80 ntBASIC3.61□□□□□ -1.83
LTBQ06643 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
LTBQ06643 MIR98-201ENST00000606724 119 ntBASIC3.61□□□□□ -1.83
LTBQ06643 AL391813.2-201ENST00000609113 322 ntBASIC3.61□□□□□ -1.83
LTBQ06643 AL161734.1-201ENST00000609720 557 ntBASIC3.61□□□□□ -1.83
LTBQ06643 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC3.61□□□□□ -1.83
LTBQ06643 MIR486-1-201ENST00000612171 68 ntBASIC3.61□□□□□ -1.83
LTBQ06643 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC3.61□□□□□ -1.83
LTBQ06643 AC009159.1-201ENST00000618386 642 ntBASIC3.61□□□□□ -1.83
LTBQ06643 AC068722.2-201ENST00000618734 544 ntBASIC3.61□□□□□ -1.83
LTBQ06643 AC009033.1-201ENST00000624279 431 ntBASIC3.61□□□□□ -1.83
LTBQ06643 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
LTBQ06643 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.61□□□□□ -1.83
LTBQ06643 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
LTBQ06643 NUP58P1-201ENST00000502546 1738 ntBASIC3.61□□□□□ -1.83
LTBQ06643 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.61□□□□□ -1.83
LTBQ06643 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.61□□□□□ -1.83
LTBQ06643 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC3.61□□□□□ -1.83
LTBQ06643 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
LTBQ06643 FAM91A3P-201ENST00000456826 2544 ntBASIC3.61□□□□□ -1.83
LTBQ06643 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC3.6□□□□□ -1.83
LTBQ06643 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
LTBQ06643 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
LTBQ06643 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.6□□□□□ -1.83
LTBQ06643 AC090229.1-201ENST00000590983 1609 ntBASIC3.6□□□□□ -1.83
LTBQ06643 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
LTBQ06643 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC3.6□□□□□ -1.83
LTBQ06643 SAGE4P-201ENST00000442271 3381 ntBASIC3.6□□□□□ -1.83
LTBQ06643 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
LTBQ06643 RNA5SP124-201ENST00000362739 110 ntBASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms