Protein–RNA interactions for Protein: P62310

LSM3, U6 snRNA-associated Sm-like protein LSm3, humanhuman

Known RBP Predictions only

Length 102 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P62310 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC1.68□□□□□ -2.14
LSM3P62310 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC1.68□□□□□ -2.14
LSM3P62310 MIR4419B-201ENST00000577260 68 ntBASIC1.68□□□□□ -2.14
LSM3P62310 AC017100.2-201ENST00000584628 355 ntBASIC1.68□□□□□ -2.14
LSM3P62310 AC010928.2-201ENST00000588017 287 ntBASIC1.68□□□□□ -2.14
LSM3P62310 DNAJC19P3-201ENST00000594491 331 ntBASIC1.68□□□□□ -2.14
LSM3P62310 AC004775.1-201ENST00000607389 753 ntBASIC1.68□□□□□ -2.14
LSM3P62310 AC018926.3-201ENST00000618841 406 ntBASIC1.68□□□□□ -2.14
LSM3P62310 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC1.68□□□□□ -2.14
LSM3P62310 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.68□□□□□ -2.14
LSM3P62310 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC1.68□□□□□ -2.14
LSM3P62310 PCNP-208ENST00000627393 136 ntTSL 2 BASIC1.68□□□□□ -2.14
LSM3P62310 CTSLP2-204ENST00000629029 392 ntBASIC1.68□□□□□ -2.14
LSM3P62310 DLD-214ENST00000639772 421 ntTSL 5 BASIC1.68□□□□□ -2.14
LSM3P62310 AC008669.1-201ENST00000565823 2178 ntBASIC1.68□□□□□ -2.14
LSM3P62310 SNORA68.1-201ENST00000364537 132 ntBASIC1.67□□□□□ -2.14
LSM3P62310 RNU6-891P-201ENST00000384280 111 ntBASIC1.67□□□□□ -2.14
LSM3P62310 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
LSM3P62310 AL122016.1-201ENST00000403365 367 ntBASIC1.67□□□□□ -2.14
LSM3P62310 AL023284.1-201ENST00000403956 276 ntBASIC1.67□□□□□ -2.14
LSM3P62310 RNA5SP184-201ENST00000411071 108 ntBASIC1.67□□□□□ -2.14
LSM3P62310 ZNF90P2-204ENST00000419323 1075 ntBASIC1.67□□□□□ -2.14
LSM3P62310 NUP35P1-201ENST00000422734 947 ntBASIC1.67□□□□□ -2.14
LSM3P62310 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC1.67□□□□□ -2.14
LSM3P62310 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC1.67□□□□□ -2.14
LSM3P62310 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC1.67□□□□□ -2.14
LSM3P62310 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC1.67□□□□□ -2.14
LSM3P62310 MTND2P19-201ENST00000449129 1012 ntBASIC1.67□□□□□ -2.14
LSM3P62310 BX248409.1-201ENST00000455497 255 ntBASIC1.67□□□□□ -2.14
LSM3P62310 HMGN1P8-201ENST00000463578 288 ntBASIC1.67□□□□□ -2.14
LSM3P62310 MTCYBP17-201ENST00000503579 789 ntBASIC1.67□□□□□ -2.14
LSM3P62310 AC093770.1-201ENST00000511559 571 ntBASIC1.67□□□□□ -2.14
LSM3P62310 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC1.67□□□□□ -2.14
LSM3P62310 ATP5F1P5-201ENST00000526403 760 ntBASIC1.67□□□□□ -2.14
LSM3P62310 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC1.67□□□□□ -2.14
LSM3P62310 AC018630.1-201ENST00000541376 925 ntBASIC1.67□□□□□ -2.14
LSM3P62310 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC1.67□□□□□ -2.14
LSM3P62310 MTCO3P22-201ENST00000603219 784 ntBASIC1.67□□□□□ -2.14
LSM3P62310 AC007938.3-201ENST00000604965 623 ntBASIC1.67□□□□□ -2.14
LSM3P62310 AC005332.10-201ENST00000612725 619 ntBASIC1.67□□□□□ -2.14
LSM3P62310 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC1.67□□□□□ -2.14
LSM3P62310 CR848007.1-201ENST00000442354 1699 ntBASIC1.67□□□□□ -2.14
LSM3P62310 AL022578.1-201ENST00000439330 1433 ntBASIC1.66□□□□□ -2.14
LSM3P62310 AC087359.1-201ENST00000508335 1740 ntBASIC1.66□□□□□ -2.14
LSM3P62310 SDAD1P2-201ENST00000441308 2028 ntBASIC1.66□□□□□ -2.14
LSM3P62310 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC1.66□□□□□ -2.14
LSM3P62310 SNORA36C-201ENST00000384289 132 ntBASIC1.66□□□□□ -2.14
LSM3P62310 CASP3-203ENST00000393588 677 ntTSL 4 BASIC1.66□□□□□ -2.14
LSM3P62310 ATF1P1-201ENST00000406040 927 ntBASIC1.66□□□□□ -2.14
LSM3P62310 RPS3AP24-201ENST00000407896 734 ntBASIC1.66□□□□□ -2.14
LSM3P62310 VN1R51P-201ENST00000411675 945 ntBASIC1.66□□□□□ -2.14
LSM3P62310 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC1.66□□□□□ -2.14
LSM3P62310 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC1.66□□□□□ -2.14
LSM3P62310 ANKRD30BP3-201ENST00000444850 1070 ntBASIC1.66□□□□□ -2.14
LSM3P62310 HIGD1AP2-201ENST00000446367 280 ntBASIC1.66□□□□□ -2.14
LSM3P62310 TPT1P14-201ENST00000448018 505 ntBASIC1.66□□□□□ -2.14
LSM3P62310 AC092155.2-201ENST00000454675 477 ntBASIC1.66□□□□□ -2.14
LSM3P62310 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC1.66□□□□□ -2.14
LSM3P62310 AC107626.1-201ENST00000471084 183 ntBASIC1.66□□□□□ -2.14
LSM3P62310 AC034222.1-201ENST00000494052 532 ntBASIC1.66□□□□□ -2.14
LSM3P62310 AC008427.1-201ENST00000503102 655 ntBASIC1.66□□□□□ -2.14
LSM3P62310 AC147055.4-201ENST00000504399 745 ntBASIC1.66□□□□□ -2.14
LSM3P62310 NDUFB4P2-201ENST00000509515 391 ntBASIC1.66□□□□□ -2.14
LSM3P62310 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
LSM3P62310 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
LSM3P62310 AC068135.2-201ENST00000569293 1028 ntBASIC1.66□□□□□ -2.14
LSM3P62310 AC012254.4-201ENST00000588843 273 ntBASIC1.66□□□□□ -2.14
LSM3P62310 AC079089.3-201ENST00000603094 673 ntBASIC1.66□□□□□ -2.14
LSM3P62310 AL033523.1-201ENST00000605153 153 ntBASIC1.66□□□□□ -2.14
LSM3P62310 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC1.66□□□□□ -2.14
LSM3P62310 MFSD8-245ENST00000641743 948 ntBASIC1.66□□□□□ -2.14
LSM3P62310 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC1.66□□□□□ -2.14
LSM3P62310 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.66□□□□□ -2.14
LSM3P62310 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC1.66□□□□□ -2.14
LSM3P62310 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC1.66□□□□□ -2.14
LSM3P62310 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC1.65□□□□□ -2.14
LSM3P62310 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC1.65□□□□□ -2.15
LSM3P62310 GNG5P1-201ENST00000255500 204 ntBASIC1.65□□□□□ -2.15
LSM3P62310 FAM133CP-201ENST00000332869 704 ntBASIC1.65□□□□□ -2.15
LSM3P62310 SNORD48-201ENST00000364953 64 ntBASIC1.65□□□□□ -2.15
LSM3P62310 RNU6-730P-201ENST00000383954 104 ntBASIC1.65□□□□□ -2.15
LSM3P62310 RNU6-441P-201ENST00000384545 106 ntBASIC1.65□□□□□ -2.15
LSM3P62310 MIR767-201ENST00000390228 109 ntBASIC1.65□□□□□ -2.15
LSM3P62310 CYCSP45-201ENST00000402289 315 ntBASIC1.65□□□□□ -2.15
LSM3P62310 HNRNPDLP1-201ENST00000412834 550 ntBASIC1.65□□□□□ -2.15
LSM3P62310 AL512504.1-201ENST00000415494 778 ntBASIC1.65□□□□□ -2.15
LSM3P62310 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC1.65□□□□□ -2.15
LSM3P62310 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC1.65□□□□□ -2.15
LSM3P62310 OFD1P12Y-201ENST00000427963 1207 ntBASIC1.65□□□□□ -2.15
LSM3P62310 OFD1P13Y-201ENST00000431179 1232 ntBASIC1.65□□□□□ -2.15
LSM3P62310 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC1.65□□□□□ -2.15
LSM3P62310 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC1.65□□□□□ -2.15
LSM3P62310 RPL23AP83-201ENST00000434984 473 ntBASIC1.65□□□□□ -2.15
LSM3P62310 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.15
LSM3P62310 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC1.65□□□□□ -2.15
LSM3P62310 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.65□□□□□ -2.15
LSM3P62310 AC097493.1-201ENST00000463958 372 ntBASIC1.65□□□□□ -2.15
LSM3P62310 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC1.65□□□□□ -2.15
LSM3P62310 BZW1P2-201ENST00000473537 826 ntBASIC1.65□□□□□ -2.15
LSM3P62310 AC015724.1-201ENST00000478577 156 ntBASIC1.65□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 169 ms