Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 SNORD116-9-201ENST00000384000 95 ntBASIC3.36□□□□□ -1.87
PDX1P52945 SNORD116-3-201ENST00000384287 95 ntBASIC3.36□□□□□ -1.87
PDX1P52945 SNORD116-7-201ENST00000384404 95 ntBASIC3.36□□□□□ -1.87
PDX1P52945 SNORD116-5-201ENST00000384462 95 ntBASIC3.36□□□□□ -1.87
PDX1P52945 MIR135A2-201ENST00000384854 100 ntBASIC3.36□□□□□ -1.87
PDX1P52945 RPS3AP26-201ENST00000398259 784 ntBASIC3.36□□□□□ -1.87
PDX1P52945 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC3.36□□□□□ -1.87
PDX1P52945 EI24P1-201ENST00000416584 867 ntBASIC3.36□□□□□ -1.87
PDX1P52945 AC002075.2-201ENST00000425207 252 ntBASIC3.36□□□□□ -1.87
PDX1P52945 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC3.36□□□□□ -1.87
PDX1P52945 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.36□□□□□ -1.87
PDX1P52945 AC109583.1-201ENST00000432156 268 ntBASIC3.36□□□□□ -1.87
PDX1P52945 RPL37P21-201ENST00000435890 276 ntBASIC3.36□□□□□ -1.87
PDX1P52945 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.36□□□□□ -1.87
PDX1P52945 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC3.36□□□□□ -1.87
PDX1P52945 AP000936.2-201ENST00000447151 681 ntBASIC3.36□□□□□ -1.87
PDX1P52945 MTCO1P42-201ENST00000457379 726 ntBASIC3.36□□□□□ -1.87
PDX1P52945 SNORD121B-201ENST00000458838 81 ntBASIC3.36□□□□□ -1.87
PDX1P52945 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
PDX1P52945 AP000797.1-201ENST00000478870 387 ntBASIC3.36□□□□□ -1.87
PDX1P52945 RPS3AP50-201ENST00000487064 803 ntBASIC3.36□□□□□ -1.87
PDX1P52945 AC034222.1-201ENST00000494052 532 ntBASIC3.36□□□□□ -1.87
PDX1P52945 AC068305.1-201ENST00000497406 726 ntBASIC3.36□□□□□ -1.87
PDX1P52945 AC096751.1-202ENST00000502691 1067 ntBASIC3.36□□□□□ -1.87
PDX1P52945 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC3.36□□□□□ -1.87
PDX1P52945 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.36□□□□□ -1.87
PDX1P52945 PHBP14-201ENST00000512887 367 ntBASIC3.36□□□□□ -1.87
PDX1P52945 AC025881.1-201ENST00000518851 512 ntBASIC3.36□□□□□ -1.87
PDX1P52945 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.36□□□□□ -1.87
PDX1P52945 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.36□□□□□ -1.87
PDX1P52945 ACTR3BP3-201ENST00000565577 979 ntBASIC3.36□□□□□ -1.87
PDX1P52945 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.36□□□□□ -1.87
PDX1P52945 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC3.36□□□□□ -1.87
PDX1P52945 MIR5697-201ENST00000578045 78 ntBASIC3.36□□□□□ -1.87
PDX1P52945 MIR4738-201ENST00000579134 87 ntBASIC3.36□□□□□ -1.87
PDX1P52945 AC239868.4-201ENST00000608318 671 ntBASIC3.36□□□□□ -1.87
PDX1P52945 AL158063.1-201ENST00000615349 536 ntBASIC3.36□□□□□ -1.87
PDX1P52945 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
PDX1P52945 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC3.36□□□□□ -1.87
PDX1P52945 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.36□□□□□ -1.87
PDX1P52945 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.36□□□□□ -1.87
PDX1P52945 AC093591.3-201ENST00000634516 308 ntBASIC3.36□□□□□ -1.87
PDX1P52945 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
PDX1P52945 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
PDX1P52945 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
PDX1P52945 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
PDX1P52945 AL356274.2-201ENST00000624379 3752 ntBASIC3.35□□□□□ -1.87
PDX1P52945 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
PDX1P52945 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.35□□□□□ -1.87
PDX1P52945 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
PDX1P52945 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.35□□□□□ -1.87
PDX1P52945 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
PDX1P52945 FRG1CP-201ENST00000358464 769 ntBASIC3.35□□□□□ -1.87
PDX1P52945 SNORA38.1-201ENST00000364172 131 ntBASIC3.35□□□□□ -1.87
PDX1P52945 SNORA7.2-201ENST00000364446 145 ntBASIC3.35□□□□□ -1.87
PDX1P52945 RNU6-114P-201ENST00000384704 105 ntBASIC3.35□□□□□ -1.87
PDX1P52945 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
PDX1P52945 OR1AA1P-201ENST00000419597 916 ntBASIC3.35□□□□□ -1.87
PDX1P52945 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC3.35□□□□□ -1.87
PDX1P52945 AC006989.1-201ENST00000427212 131 ntBASIC3.35□□□□□ -1.87
PDX1P52945 MTCO2P16-201ENST00000436962 677 ntBASIC3.35□□□□□ -1.87
PDX1P52945 RPS29P31-201ENST00000446147 164 ntBASIC3.35□□□□□ -1.87
PDX1P52945 COX6CP12-201ENST00000446748 202 ntBASIC3.35□□□□□ -1.87
PDX1P52945 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.35□□□□□ -1.87
PDX1P52945 RPS24P6-201ENST00000452670 400 ntBASIC3.35□□□□□ -1.87
PDX1P52945 RPL31P3-201ENST00000458430 332 ntBASIC3.35□□□□□ -1.87
PDX1P52945 RNU7-170P-201ENST00000459303 61 ntBASIC3.35□□□□□ -1.87
PDX1P52945 RPL21P13-201ENST00000488305 481 ntBASIC3.35□□□□□ -1.87
PDX1P52945 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
PDX1P52945 AF131216.2-201ENST00000512316 564 ntBASIC3.35□□□□□ -1.87
PDX1P52945 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC3.35□□□□□ -1.87
PDX1P52945 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC3.35□□□□□ -1.87
PDX1P52945 MTND5P13-201ENST00000513046 1079 ntBASIC3.35□□□□□ -1.87
PDX1P52945 RNU1-103P-201ENST00000516502 125 ntBASIC3.35□□□□□ -1.87
PDX1P52945 RNA5SP309-201ENST00000516670 106 ntBASIC3.35□□□□□ -1.87
PDX1P52945 IGKV2-26-201ENST00000518305 343 ntBASIC3.35□□□□□ -1.87
PDX1P52945 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC3.35□□□□□ -1.87
PDX1P52945 AP002748.2-201ENST00000528671 348 ntBASIC3.35□□□□□ -1.87
PDX1P52945 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.35□□□□□ -1.87
PDX1P52945 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC3.35□□□□□ -1.87
PDX1P52945 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.35□□□□□ -1.87
PDX1P52945 MEG8-218ENST00000556720 456 ntTSL 3 BASIC3.35□□□□□ -1.87
PDX1P52945 ABBA01006766.1-201ENST00000584728 294 ntBASIC3.35□□□□□ -1.87
PDX1P52945 AL031176.1-201ENST00000604554 466 ntBASIC3.35□□□□□ -1.87
PDX1P52945 AC027807.2-201ENST00000616099 408 ntBASIC3.35□□□□□ -1.87
PDX1P52945 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
PDX1P52945 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
PDX1P52945 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.35□□□□□ -1.87
PDX1P52945 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
PDX1P52945 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
PDX1P52945 EXOC5P1-201ENST00000510543 1969 ntBASIC3.34□□□□□ -1.87
PDX1P52945 Y_RNA.77-201ENST00000362962 107 ntBASIC3.34□□□□□ -1.87
PDX1P52945 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.87
PDX1P52945 AL122016.1-201ENST00000403365 367 ntBASIC3.34□□□□□ -1.87
PDX1P52945 RN7SKP142-201ENST00000411236 328 ntBASIC3.34□□□□□ -1.87
PDX1P52945 AL137014.1-201ENST00000420490 1226 ntBASIC3.34□□□□□ -1.87
PDX1P52945 AC099677.1-201ENST00000420575 175 ntBASIC3.34□□□□□ -1.87
PDX1P52945 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.34□□□□□ -1.87
PDX1P52945 OR4K11P-201ENST00000431829 904 ntBASIC3.34□□□□□ -1.87
PDX1P52945 SNRPGP9-201ENST00000456025 225 ntBASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms