Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
USP11P51784 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC5.32□□□□□ -1.56
USP11P51784 SNORA75B-201ENST00000384053 137 ntBASIC5.32□□□□□ -1.56
USP11P51784 AL360182.1-201ENST00000397433 468 ntBASIC5.32□□□□□ -1.56
USP11P51784 AL049697.2-201ENST00000403708 294 ntBASIC5.32□□□□□ -1.56
USP11P51784 POLHP1-201ENST00000411806 470 ntBASIC5.32□□□□□ -1.56
USP11P51784 ATG3P1-201ENST00000419507 911 ntBASIC5.32□□□□□ -1.56
USP11P51784 AC009965.2-201ENST00000425328 970 ntBASIC5.32□□□□□ -1.56
USP11P51784 AC093151.1-201ENST00000427711 313 ntBASIC5.32□□□□□ -1.56
USP11P51784 PSMA6P3-201ENST00000428242 164 ntBASIC5.32□□□□□ -1.56
USP11P51784 CEACAMP9-201ENST00000442990 513 ntBASIC5.32□□□□□ -1.56
USP11P51784 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC5.32□□□□□ -1.56
USP11P51784 RPL7P52-201ENST00000449200 742 ntBASIC5.32□□□□□ -1.56
USP11P51784 AC104073.1-201ENST00000451988 151 ntBASIC5.32□□□□□ -1.56
USP11P51784 GSTA11P-201ENST00000452866 669 ntBASIC5.32□□□□□ -1.56
USP11P51784 snoU13.8-201ENST00000458890 104 ntBASIC5.32□□□□□ -1.56
USP11P51784 AC004801.2-202ENST00000463559 283 ntBASIC5.32□□□□□ -1.56
USP11P51784 PLGLA-201ENST00000465668 449 ntBASIC5.32□□□□□ -1.56
USP11P51784 AC104564.1-201ENST00000493028 407 ntBASIC5.32□□□□□ -1.56
USP11P51784 AC015911.1-201ENST00000495111 156 ntBASIC5.32□□□□□ -1.56
USP11P51784 AC093853.1-201ENST00000515689 483 ntBASIC5.32□□□□□ -1.56
USP11P51784 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC5.32□□□□□ -1.56
USP11P51784 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC5.32□□□□□ -1.56
USP11P51784 AL137161.1-201ENST00000532231 390 ntBASIC5.32□□□□□ -1.56
USP11P51784 AC024224.1-201ENST00000538284 609 ntBASIC5.32□□□□□ -1.56
USP11P51784 OR11H5P-201ENST00000554039 926 ntBASIC5.32□□□□□ -1.56
USP11P51784 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC5.32□□□□□ -1.56
USP11P51784 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC5.32□□□□□ -1.56
USP11P51784 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC5.32□□□□□ -1.56
USP11P51784 AC092747.3-201ENST00000603769 301 ntBASIC5.32□□□□□ -1.56
USP11P51784 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC5.32□□□□□ -1.56
USP11P51784 MIR8069-1-201ENST00000616627 86 ntBASIC5.32□□□□□ -1.56
USP11P51784 MIR8069-2-201ENST00000621412 86 ntBASIC5.32□□□□□ -1.56
USP11P51784 PLCE1P1-201ENST00000622094 305 ntBASIC5.32□□□□□ -1.56
USP11P51784 ZNF519P1-201ENST00000449011 1626 ntBASIC5.32□□□□□ -1.56
USP11P51784 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC5.32□□□□□ -1.56
USP11P51784 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
USP11P51784 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
USP11P51784 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
USP11P51784 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
USP11P51784 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
USP11P51784 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
USP11P51784 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC5.32□□□□□ -1.56
USP11P51784 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
USP11P51784 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
USP11P51784 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC5.31□□□□□ -1.56
USP11P51784 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
USP11P51784 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
USP11P51784 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
USP11P51784 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
USP11P51784 RNU6-82P-201ENST00000363970 107 ntBASIC5.31□□□□□ -1.56
USP11P51784 SNORD115-7-201ENST00000365306 82 ntBASIC5.31□□□□□ -1.56
USP11P51784 SNORA70F-201ENST00000384142 135 ntBASIC5.31□□□□□ -1.56
USP11P51784 RNU6ATAC23P-201ENST00000408448 123 ntBASIC5.31□□□□□ -1.56
USP11P51784 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC5.31□□□□□ -1.56
USP11P51784 RPL7P10-201ENST00000417407 739 ntBASIC5.31□□□□□ -1.56
USP11P51784 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC5.31□□□□□ -1.56
USP11P51784 AC008267.5-201ENST00000424928 265 ntBASIC5.31□□□□□ -1.56
USP11P51784 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC5.31□□□□□ -1.56
USP11P51784 UBE2V1P13-201ENST00000436983 439 ntBASIC5.31□□□□□ -1.56
USP11P51784 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC5.31□□□□□ -1.56
USP11P51784 RAC1P7-201ENST00000445367 377 ntBASIC5.31□□□□□ -1.56
USP11P51784 AC073264.2-201ENST00000448886 166 ntBASIC5.31□□□□□ -1.56
USP11P51784 RPL5P30-201ENST00000465511 891 ntBASIC5.31□□□□□ -1.56
USP11P51784 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC5.31□□□□□ -1.56
USP11P51784 RPL36AP41-201ENST00000493820 306 ntBASIC5.31□□□□□ -1.56
USP11P51784 Y_RNA.661-201ENST00000516003 99 ntBASIC5.31□□□□□ -1.56
USP11P51784 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC5.31□□□□□ -1.56
USP11P51784 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
USP11P51784 AP006289.1-201ENST00000538089 277 ntBASIC5.31□□□□□ -1.56
USP11P51784 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC5.31□□□□□ -1.56
USP11P51784 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC5.31□□□□□ -1.56
USP11P51784 AC090615.1-201ENST00000577519 154 ntBASIC5.31□□□□□ -1.56
USP11P51784 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC5.31□□□□□ -1.56
USP11P51784 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC5.31□□□□□ -1.56
USP11P51784 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC5.31□□□□□ -1.56
USP11P51784 AL354984.3-201ENST00000604803 325 ntBASIC5.31□□□□□ -1.56
USP11P51784 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC5.31□□□□□ -1.56
USP11P51784 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC5.31□□□□□ -1.56
USP11P51784 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
USP11P51784 MFSD8-216ENST00000641147 4009 ntBASIC5.31□□□□□ -1.56
USP11P51784 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
USP11P51784 DDX18P3-201ENST00000404856 2007 ntBASIC5.31□□□□□ -1.56
USP11P51784 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.31□□□□□ -1.56
USP11P51784 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
USP11P51784 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
USP11P51784 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC5.31□□□□□ -1.56
USP11P51784 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
USP11P51784 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
USP11P51784 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
USP11P51784 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.3□□□□□ -1.56
USP11P51784 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
USP11P51784 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
USP11P51784 EIF4E2P1-201ENST00000393781 255 ntBASIC5.3□□□□□ -1.56
USP11P51784 Z98745.1-201ENST00000402553 494 ntBASIC5.3□□□□□ -1.56
USP11P51784 AC114491.1-201ENST00000416095 246 ntBASIC5.3□□□□□ -1.56
USP11P51784 RPL7P28-201ENST00000437739 740 ntBASIC5.3□□□□□ -1.56
USP11P51784 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC5.3□□□□□ -1.56
USP11P51784 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC5.3□□□□□ -1.56
USP11P51784 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms