Protein–RNA interactions for Protein: P46779

RPL28, 60S ribosomal protein L28, humanhuman

Known RBP Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28P46779 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC1.73□□□□□ -2.13
RPL28P46779 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
RPL28P46779 GNG5P1-201ENST00000255500 204 ntBASIC1.72□□□□□ -2.13
RPL28P46779 FRG1BP-201ENST00000278882 761 ntBASIC1.72□□□□□ -2.13
RPL28P46779 RNU6-7-201ENST00000364784 107 ntBASIC1.72□□□□□ -2.13
RPL28P46779 RNU6-8-201ENST00000365467 107 ntBASIC1.72□□□□□ -2.13
RPL28P46779 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
RPL28P46779 RNU6-1072P-201ENST00000384703 107 ntBASIC1.72□□□□□ -2.13
RPL28P46779 RNU6-443P-201ENST00000384780 107 ntBASIC1.72□□□□□ -2.13
RPL28P46779 MIR491-201ENST00000384877 84 ntBASIC1.72□□□□□ -2.13
RPL28P46779 SNORA48.5-201ENST00000391143 135 ntBASIC1.72□□□□□ -2.13
RPL28P46779 AL035405.1-201ENST00000400795 710 ntBASIC1.72□□□□□ -2.13
RPL28P46779 SNORA11-201ENST00000408789 128 ntBASIC1.72□□□□□ -2.13
RPL28P46779 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC1.72□□□□□ -2.13
RPL28P46779 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC1.72□□□□□ -2.13
RPL28P46779 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC1.72□□□□□ -2.13
RPL28P46779 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC1.72□□□□□ -2.13
RPL28P46779 TAF13P2-201ENST00000416876 286 ntBASIC1.72□□□□□ -2.13
RPL28P46779 ZDHHC20P2-201ENST00000424108 429 ntBASIC1.72□□□□□ -2.13
RPL28P46779 AL358075.3-201ENST00000426289 226 ntBASIC1.72□□□□□ -2.13
RPL28P46779 Z93242.1-201ENST00000427102 353 ntBASIC1.72□□□□□ -2.13
RPL28P46779 AC087499.2-201ENST00000432861 149 ntBASIC1.72□□□□□ -2.13
RPL28P46779 UBE2V1P13-201ENST00000436983 439 ntBASIC1.72□□□□□ -2.13
RPL28P46779 AC093156.1-201ENST00000440382 670 ntBASIC1.72□□□□□ -2.13
RPL28P46779 MTCO3P43-201ENST00000440974 771 ntBASIC1.72□□□□□ -2.13
RPL28P46779 RPS24P13-201ENST00000442520 397 ntBASIC1.72□□□□□ -2.13
RPL28P46779 GXYLT1P1-201ENST00000446657 490 ntBASIC1.72□□□□□ -2.13
RPL28P46779 IGKV1OR-3-201ENST00000446944 348 ntBASIC1.72□□□□□ -2.13
RPL28P46779 SETP6-201ENST00000479329 568 ntBASIC1.72□□□□□ -2.13
RPL28P46779 RPS15AP34-201ENST00000487776 387 ntBASIC1.72□□□□□ -2.13
RPL28P46779 NAMPTP2-201ENST00000505629 1115 ntBASIC1.72□□□□□ -2.13
RPL28P46779 AC010374.2-201ENST00000512933 535 ntBASIC1.72□□□□□ -2.13
RPL28P46779 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC1.72□□□□□ -2.13
RPL28P46779 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC1.72□□□□□ -2.13
RPL28P46779 MAL2-206ENST00000522187 547 ntTSL 4 BASIC1.72□□□□□ -2.13
RPL28P46779 OR4R1P-201ENST00000529879 463 ntBASIC1.72□□□□□ -2.13
RPL28P46779 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC1.72□□□□□ -2.13
RPL28P46779 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC1.72□□□□□ -2.13
RPL28P46779 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC1.72□□□□□ -2.13
RPL28P46779 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC1.72□□□□□ -2.13
RPL28P46779 MTCYBP27-201ENST00000555160 670 ntBASIC1.72□□□□□ -2.13
RPL28P46779 OR4K8P-201ENST00000578842 1048 ntBASIC1.72□□□□□ -2.13
RPL28P46779 MIR5194-201ENST00000582634 120 ntBASIC1.72□□□□□ -2.13
RPL28P46779 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC1.72□□□□□ -2.13
RPL28P46779 AC011471.1-201ENST00000585766 187 ntBASIC1.72□□□□□ -2.13
RPL28P46779 NRBF2P5-201ENST00000603087 788 ntBASIC1.72□□□□□ -2.13
RPL28P46779 AC012468.1-201ENST00000604888 430 ntBASIC1.72□□□□□ -2.13
RPL28P46779 AP005137.2-201ENST00000609238 400 ntBASIC1.72□□□□□ -2.13
RPL28P46779 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC1.72□□□□□ -2.13
RPL28P46779 TUG1_1.1-201ENST00000610654 145 ntBASIC1.72□□□□□ -2.13
RPL28P46779 AC079395.3-201ENST00000615161 484 ntBASIC1.72□□□□□ -2.13
RPL28P46779 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC1.72□□□□□ -2.13
RPL28P46779 HOTTIP_4.1-201ENST00000618195 165 ntBASIC1.72□□□□□ -2.13
RPL28P46779 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
RPL28P46779 AL359693.1-201ENST00000614959 2407 ntBASIC1.72□□□□□ -2.13
RPL28P46779 AL137003.2-201ENST00000606924 2538 ntBASIC1.72□□□□□ -2.13
RPL28P46779 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
RPL28P46779 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
RPL28P46779 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC1.71□□□□□ -2.14
RPL28P46779 MIR16-2-201ENST00000362117 81 ntBASIC1.71□□□□□ -2.14
RPL28P46779 MIR767-201ENST00000390228 109 ntBASIC1.71□□□□□ -2.14
RPL28P46779 AP002784.2-201ENST00000397300 549 ntBASIC1.71□□□□□ -2.14
RPL28P46779 RPS3AP24-201ENST00000407896 734 ntBASIC1.71□□□□□ -2.14
RPL28P46779 ERMN-204ENST00000409925 556 ntTSL 4 BASIC1.71□□□□□ -2.14
RPL28P46779 RNU2-28P-201ENST00000410457 189 ntBASIC1.71□□□□□ -2.14
RPL28P46779 AF274854.1-201ENST00000413236 615 ntBASIC1.71□□□□□ -2.14
RPL28P46779 Z85995.1-201ENST00000415547 335 ntBASIC1.71□□□□□ -2.14
RPL28P46779 USP9YP27-201ENST00000418455 438 ntBASIC1.71□□□□□ -2.14
RPL28P46779 ACTR3BP6-201ENST00000422332 1241 ntBASIC1.71□□□□□ -2.14
RPL28P46779 AC098614.2-201ENST00000426040 255 ntBASIC1.71□□□□□ -2.14
RPL28P46779 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC1.71□□□□□ -2.14
RPL28P46779 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC1.71□□□□□ -2.14
RPL28P46779 OR4K11P-201ENST00000431829 904 ntBASIC1.71□□□□□ -2.14
RPL28P46779 AL445687.1-201ENST00000439946 251 ntBASIC1.71□□□□□ -2.14
RPL28P46779 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC1.71□□□□□ -2.14
RPL28P46779 RPS15AP27-201ENST00000449183 343 ntBASIC1.71□□□□□ -2.14
RPL28P46779 AC092155.2-201ENST00000454675 477 ntBASIC1.71□□□□□ -2.14
RPL28P46779 AC233279.1-201ENST00000455300 423 ntBASIC1.71□□□□□ -2.14
RPL28P46779 AC107626.1-201ENST00000471084 183 ntBASIC1.71□□□□□ -2.14
RPL28P46779 AC013828.1-201ENST00000481845 158 ntBASIC1.71□□□□□ -2.14
RPL28P46779 AC023424.2-201ENST00000493479 777 ntBASIC1.71□□□□□ -2.14
RPL28P46779 MTCYBP17-201ENST00000503579 789 ntBASIC1.71□□□□□ -2.14
RPL28P46779 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC1.71□□□□□ -2.14
RPL28P46779 AC107222.1-201ENST00000510899 637 ntBASIC1.71□□□□□ -2.14
RPL28P46779 MRPS36P2-201ENST00000512569 299 ntBASIC1.71□□□□□ -2.14
RPL28P46779 SETP12-201ENST00000514068 805 ntBASIC1.71□□□□□ -2.14
RPL28P46779 RNU6-1282P-201ENST00000516735 96 ntBASIC1.71□□□□□ -2.14
RPL28P46779 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC1.71□□□□□ -2.14
RPL28P46779 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC1.71□□□□□ -2.14
RPL28P46779 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC1.71□□□□□ -2.14
RPL28P46779 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC1.71□□□□□ -2.14
RPL28P46779 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC1.71□□□□□ -2.14
RPL28P46779 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC1.71□□□□□ -2.14
RPL28P46779 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC1.71□□□□□ -2.14
RPL28P46779 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC1.71□□□□□ -2.14
RPL28P46779 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC1.71□□□□□ -2.14
RPL28P46779 MYL12BP1-201ENST00000569826 507 ntBASIC1.71□□□□□ -2.14
RPL28P46779 MIR4635-201ENST00000583759 79 ntBASIC1.71□□□□□ -2.14
RPL28P46779 BNIP3P22-201ENST00000593399 556 ntBASIC1.71□□□□□ -2.14
RPL28P46779 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC1.71□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms