Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SLC6A4P31645 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SLC6A4P31645 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
SLC6A4P31645 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.24□□□□□ -1.73
SLC6A4P31645 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SLC6A4P31645 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
SLC6A4P31645 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
SLC6A4P31645 RNU6-989P-201ENST00000362756 107 ntBASIC4.24□□□□□ -1.73
SLC6A4P31645 RNU6-223P-201ENST00000362830 107 ntBASIC4.24□□□□□ -1.73
SLC6A4P31645 Y_RNA.72-201ENST00000362894 103 ntBASIC4.24□□□□□ -1.73
SLC6A4P31645 RNU6-451P-201ENST00000362921 107 ntBASIC4.24□□□□□ -1.73
SLC6A4P31645 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
SLC6A4P31645 SNORA69-201ENST00000383895 132 ntBASIC4.24□□□□□ -1.73
SLC6A4P31645 RNU6-74P-201ENST00000384235 107 ntBASIC4.24□□□□□ -1.73
SLC6A4P31645 Y_RNA.548-201ENST00000384656 105 ntBASIC4.24□□□□□ -1.73
SLC6A4P31645 AL121834.1-202ENST00000404494 277 ntBASIC4.24□□□□□ -1.73
SLC6A4P31645 RNU6-516P-201ENST00000411381 104 ntBASIC4.24□□□□□ -1.73
SLC6A4P31645 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC4.24□□□□□ -1.73
SLC6A4P31645 RPL23AP30-201ENST00000432419 501 ntBASIC4.24□□□□□ -1.73
SLC6A4P31645 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC4.24□□□□□ -1.73
SLC6A4P31645 RPS20P5-201ENST00000434808 360 ntBASIC4.24□□□□□ -1.73
SLC6A4P31645 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC4.24□□□□□ -1.73
SLC6A4P31645 RPL36AP13-201ENST00000457490 317 ntBASIC4.24□□□□□ -1.73
SLC6A4P31645 SNORA84-201ENST00000459229 133 ntBASIC4.24□□□□□ -1.73
SLC6A4P31645 HMGB1P25-201ENST00000468402 607 ntBASIC4.24□□□□□ -1.73
SLC6A4P31645 RPL21P103-201ENST00000479921 488 ntBASIC4.24□□□□□ -1.73
SLC6A4P31645 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC4.24□□□□□ -1.73
SLC6A4P31645 AL132838.2-201ENST00000492041 314 ntBASIC4.24□□□□□ -1.73
SLC6A4P31645 AC020593.1-201ENST00000507399 299 ntBASIC4.24□□□□□ -1.73
SLC6A4P31645 TMEM248P1-201ENST00000510579 951 ntBASIC4.24□□□□□ -1.73
SLC6A4P31645 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC4.24□□□□□ -1.73
SLC6A4P31645 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC4.24□□□□□ -1.73
SLC6A4P31645 LRRC34P2-201ENST00000514850 553 ntBASIC4.24□□□□□ -1.73
SLC6A4P31645 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC4.24□□□□□ -1.73
SLC6A4P31645 RNU6-798P-201ENST00000516912 103 ntBASIC4.24□□□□□ -1.73
SLC6A4P31645 RNU6-1220P-201ENST00000517126 108 ntBASIC4.24□□□□□ -1.73
SLC6A4P31645 MYL12AP1-201ENST00000518490 515 ntBASIC4.24□□□□□ -1.73
SLC6A4P31645 OR4R3P-201ENST00000525084 838 ntBASIC4.24□□□□□ -1.73
SLC6A4P31645 CENPUP1-201ENST00000526649 1202 ntBASIC4.24□□□□□ -1.73
SLC6A4P31645 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC4.24□□□□□ -1.73
SLC6A4P31645 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC4.24□□□□□ -1.73
SLC6A4P31645 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC4.24□□□□□ -1.73
SLC6A4P31645 AC034105.4-201ENST00000568304 277 ntBASIC4.24□□□□□ -1.73
SLC6A4P31645 GLUD1P4-201ENST00000590914 418 ntBASIC4.24□□□□□ -1.73
SLC6A4P31645 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC4.24□□□□□ -1.73
SLC6A4P31645 AC112230.1-201ENST00000604342 547 ntBASIC4.24□□□□□ -1.73
SLC6A4P31645 AC245389.1-201ENST00000605141 529 ntBASIC4.24□□□□□ -1.73
SLC6A4P31645 AC130324.3-201ENST00000614165 542 ntBASIC4.24□□□□□ -1.73
SLC6A4P31645 Y_RNA.804-201ENST00000615262 101 ntBASIC4.24□□□□□ -1.73
SLC6A4P31645 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
SLC6A4P31645 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
SLC6A4P31645 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SLC6A4P31645 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC4.24□□□□□ -1.73
SLC6A4P31645 Z73965.1-201ENST00000623412 2297 ntBASIC4.24□□□□□ -1.73
SLC6A4P31645 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.24□□□□□ -1.73
SLC6A4P31645 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.24□□□□□ -1.73
SLC6A4P31645 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
SLC6A4P31645 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
SLC6A4P31645 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SLC6A4P31645 AL354685.2-201ENST00000448218 1447 ntBASIC4.23□□□□□ -1.73
SLC6A4P31645 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
SLC6A4P31645 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SLC6A4P31645 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SLC6A4P31645 OR52B1P-201ENST00000316506 909 ntBASIC4.23□□□□□ -1.73
SLC6A4P31645 Y_RNA.157-201ENST00000363638 102 ntBASIC4.23□□□□□ -1.73
SLC6A4P31645 RNU6-356P-201ENST00000384140 107 ntBASIC4.23□□□□□ -1.73
SLC6A4P31645 RNU6-432P-201ENST00000384196 109 ntBASIC4.23□□□□□ -1.73
SLC6A4P31645 RNU6-1158P-201ENST00000391167 107 ntBASIC4.23□□□□□ -1.73
SLC6A4P31645 PPIAP31-201ENST00000405422 495 ntBASIC4.23□□□□□ -1.73
SLC6A4P31645 RNU2-9P-201ENST00000410194 145 ntBASIC4.23□□□□□ -1.73
SLC6A4P31645 HSPE1P12-201ENST00000412576 301 ntBASIC4.23□□□□□ -1.73
SLC6A4P31645 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.23□□□□□ -1.73
SLC6A4P31645 OR1AA1P-201ENST00000419597 916 ntBASIC4.23□□□□□ -1.73
SLC6A4P31645 MED13P1-201ENST00000428342 171 ntBASIC4.23□□□□□ -1.73
SLC6A4P31645 AL358472.1-201ENST00000431295 329 ntBASIC4.23□□□□□ -1.73
SLC6A4P31645 RPL23AP33-201ENST00000442301 452 ntBASIC4.23□□□□□ -1.73
SLC6A4P31645 AL162151.2-201ENST00000448875 158 ntBASIC4.23□□□□□ -1.73
SLC6A4P31645 AC034236.1-201ENST00000469891 373 ntBASIC4.23□□□□□ -1.73
SLC6A4P31645 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.23□□□□□ -1.73
SLC6A4P31645 AP002812.1-201ENST00000495378 474 ntBASIC4.23□□□□□ -1.73
SLC6A4P31645 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC4.23□□□□□ -1.73
SLC6A4P31645 RNU6-875P-201ENST00000516488 106 ntBASIC4.23□□□□□ -1.73
SLC6A4P31645 RNU7-51P-201ENST00000516560 62 ntBASIC4.23□□□□□ -1.73
SLC6A4P31645 SNORD60.2-201ENST00000516883 86 ntBASIC4.23□□□□□ -1.73
SLC6A4P31645 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.23□□□□□ -1.73
SLC6A4P31645 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
SLC6A4P31645 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.23□□□□□ -1.73
SLC6A4P31645 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC4.23□□□□□ -1.73
SLC6A4P31645 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC4.23□□□□□ -1.73
SLC6A4P31645 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC4.23□□□□□ -1.73
SLC6A4P31645 HIF1AP1-201ENST00000553642 175 ntBASIC4.23□□□□□ -1.73
SLC6A4P31645 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.23□□□□□ -1.73
SLC6A4P31645 AL133153.1-201ENST00000557756 303 ntBASIC4.23□□□□□ -1.73
SLC6A4P31645 AC015917.1-201ENST00000579654 510 ntBASIC4.23□□□□□ -1.73
SLC6A4P31645 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.23□□□□□ -1.73
SLC6A4P31645 AC103710.2-201ENST00000609912 942 ntBASIC4.23□□□□□ -1.73
SLC6A4P31645 AC093838.1-201ENST00000613014 469 ntBASIC4.23□□□□□ -1.73
SLC6A4P31645 AC006504.8-201ENST00000621046 635 ntBASIC4.23□□□□□ -1.73
SLC6A4P31645 FRG1KP-201ENST00000623592 341 ntBASIC4.23□□□□□ -1.73
SLC6A4P31645 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms