Protein–RNA interactions for Protein: P25800

LMO1, Rhombotin-1, humanhuman

Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1P25800 Z98745.1-201ENST00000402553 494 ntBASIC3.89□□□□□ -1.79
LMO1P25800 AL023807.1-201ENST00000407932 359 ntBASIC3.89□□□□□ -1.79
LMO1P25800 RN7SKP167-201ENST00000411047 285 ntBASIC3.89□□□□□ -1.79
LMO1P25800 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.89□□□□□ -1.79
LMO1P25800 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.89□□□□□ -1.79
LMO1P25800 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.89□□□□□ -1.79
LMO1P25800 RPL7L1P10-201ENST00000427790 463 ntBASIC3.89□□□□□ -1.79
LMO1P25800 RPL36P19-201ENST00000430744 301 ntBASIC3.89□□□□□ -1.79
LMO1P25800 RPEP2-201ENST00000432149 701 ntBASIC3.89□□□□□ -1.79
LMO1P25800 AC005154.2-201ENST00000438110 379 ntBASIC3.89□□□□□ -1.79
LMO1P25800 AC016831.4-201ENST00000438302 307 ntBASIC3.89□□□□□ -1.79
LMO1P25800 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC3.89□□□□□ -1.79
LMO1P25800 AC105402.2-201ENST00000438503 358 ntBASIC3.89□□□□□ -1.79
LMO1P25800 HMGB3P11-201ENST00000440127 604 ntBASIC3.89□□□□□ -1.79
LMO1P25800 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC3.89□□□□□ -1.79
LMO1P25800 AL590664.1-201ENST00000448065 339 ntBASIC3.89□□□□□ -1.79
LMO1P25800 ISCUP1-201ENST00000454451 448 ntBASIC3.89□□□□□ -1.79
LMO1P25800 AC007967.1-201ENST00000455422 1159 ntBASIC3.89□□□□□ -1.79
LMO1P25800 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC3.89□□□□□ -1.79
LMO1P25800 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC3.89□□□□□ -1.79
LMO1P25800 RPL5P30-201ENST00000465511 891 ntBASIC3.89□□□□□ -1.79
LMO1P25800 RPS26P28-201ENST00000470806 348 ntBASIC3.89□□□□□ -1.79
LMO1P25800 RPL12P20-201ENST00000475538 479 ntBASIC3.89□□□□□ -1.79
LMO1P25800 AC078785.3-201ENST00000476607 425 ntBASIC3.89□□□□□ -1.79
LMO1P25800 AC108022.1-201ENST00000493466 478 ntBASIC3.89□□□□□ -1.79
LMO1P25800 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC3.89□□□□□ -1.79
LMO1P25800 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
LMO1P25800 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC3.89□□□□□ -1.79
LMO1P25800 FAM206BP-201ENST00000510179 541 ntBASIC3.89□□□□□ -1.79
LMO1P25800 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC3.89□□□□□ -1.79
LMO1P25800 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC3.89□□□□□ -1.79
LMO1P25800 RNA5SP446-201ENST00000515955 82 ntBASIC3.89□□□□□ -1.79
LMO1P25800 Y_RNA.661-201ENST00000516003 99 ntBASIC3.89□□□□□ -1.79
LMO1P25800 RN7SKP276-201ENST00000516242 268 ntBASIC3.89□□□□□ -1.79
LMO1P25800 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC3.89□□□□□ -1.79
LMO1P25800 AC104986.1-201ENST00000517978 436 ntBASIC3.89□□□□□ -1.79
LMO1P25800 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC3.89□□□□□ -1.79
LMO1P25800 IGKV1-32-201ENST00000519290 311 ntBASIC3.89□□□□□ -1.79
LMO1P25800 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC3.89□□□□□ -1.79
LMO1P25800 AC100770.1-201ENST00000532310 322 ntBASIC3.89□□□□□ -1.79
LMO1P25800 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC3.89□□□□□ -1.79
LMO1P25800 DYNLL1P4-201ENST00000549314 266 ntBASIC3.89□□□□□ -1.79
LMO1P25800 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC3.89□□□□□ -1.79
LMO1P25800 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.89□□□□□ -1.79
LMO1P25800 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC3.89□□□□□ -1.79
LMO1P25800 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC3.89□□□□□ -1.79
LMO1P25800 MIR3167-201ENST00000579623 85 ntBASIC3.89□□□□□ -1.79
LMO1P25800 MIR4716-201ENST00000579628 84 ntBASIC3.89□□□□□ -1.79
LMO1P25800 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC3.89□□□□□ -1.79
LMO1P25800 MIR3942-201ENST00000585264 109 ntBASIC3.89□□□□□ -1.79
LMO1P25800 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.89□□□□□ -1.79
LMO1P25800 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC3.89□□□□□ -1.79
LMO1P25800 CYP2C61P-201ENST00000604072 290 ntBASIC3.89□□□□□ -1.79
LMO1P25800 HSPE1P14-201ENST00000605812 302 ntBASIC3.89□□□□□ -1.79
LMO1P25800 AC008966.2-201ENST00000606157 453 ntBASIC3.89□□□□□ -1.79
LMO1P25800 MIR378J-201ENST00000611988 109 ntBASIC3.89□□□□□ -1.79
LMO1P25800 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC3.89□□□□□ -1.79
LMO1P25800 MIR7641-1-201ENST00000627518 61 ntBASIC3.89□□□□□ -1.79
LMO1P25800 CARF-203ENST00000414439 2099 ntTSL 2 BASIC3.89□□□□□ -1.79
LMO1P25800 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
LMO1P25800 ACTR3BP2-202ENST00000623630 1338 ntBASIC3.89□□□□□ -1.79
LMO1P25800 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
LMO1P25800 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC3.89□□□□□ -1.79
LMO1P25800 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
LMO1P25800 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
LMO1P25800 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
LMO1P25800 SAGE2P-201ENST00000420011 2126 ntBASIC3.88□□□□□ -1.79
LMO1P25800 MAPK10-303ENST00000641324 3959 ntBASIC3.88□□□□□ -1.79
LMO1P25800 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC3.88□□□□□ -1.79
LMO1P25800 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
LMO1P25800 AC097504.1-201ENST00000515103 2415 ntBASIC3.88□□□□□ -1.79
LMO1P25800 RNA5SP191-201ENST00000362585 102 ntBASIC3.88□□□□□ -1.79
LMO1P25800 Y_RNA.60-201ENST00000362831 98 ntBASIC3.88□□□□□ -1.79
LMO1P25800 Y_RNA.167-201ENST00000363735 109 ntBASIC3.88□□□□□ -1.79
LMO1P25800 AC117470.1-201ENST00000381974 330 ntBASIC3.88□□□□□ -1.79
LMO1P25800 RNU6-746P-201ENST00000384112 109 ntBASIC3.88□□□□□ -1.79
LMO1P25800 SNORA51.6-201ENST00000384151 125 ntBASIC3.88□□□□□ -1.79
LMO1P25800 RNU6-769P-201ENST00000384407 104 ntBASIC3.88□□□□□ -1.79
LMO1P25800 Y_RNA.489-201ENST00000384410 101 ntBASIC3.88□□□□□ -1.79
LMO1P25800 RNY1P14-201ENST00000384426 108 ntBASIC3.88□□□□□ -1.79
LMO1P25800 Y_RNA.552-201ENST00000384665 112 ntBASIC3.88□□□□□ -1.79
LMO1P25800 RNU6-1109P-201ENST00000391187 107 ntBASIC3.88□□□□□ -1.79
LMO1P25800 SDHCP2-201ENST00000398565 501 ntBASIC3.88□□□□□ -1.79
LMO1P25800 SSXP10-201ENST00000402595 565 ntBASIC3.88□□□□□ -1.79
LMO1P25800 AL591416.1-201ENST00000404015 867 ntBASIC3.88□□□□□ -1.79
LMO1P25800 MIR548F5-201ENST00000408421 86 ntBASIC3.88□□□□□ -1.79
LMO1P25800 AL590139.1-201ENST00000416267 400 ntBASIC3.88□□□□□ -1.79
LMO1P25800 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC3.88□□□□□ -1.79
LMO1P25800 COX6CP15-201ENST00000426313 211 ntBASIC3.88□□□□□ -1.79
LMO1P25800 C4BPAP2-201ENST00000428434 478 ntBASIC3.88□□□□□ -1.79
LMO1P25800 DNAJC19P7-201ENST00000428811 344 ntBASIC3.88□□□□□ -1.79
LMO1P25800 RPL21P91-201ENST00000429231 479 ntBASIC3.88□□□□□ -1.79
LMO1P25800 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC3.88□□□□□ -1.79
LMO1P25800 LSM1P1-201ENST00000438629 273 ntBASIC3.88□□□□□ -1.79
LMO1P25800 MTCO1P27-201ENST00000448269 226 ntBASIC3.88□□□□□ -1.79
LMO1P25800 Y_RNA.635-201ENST00000459041 101 ntBASIC3.88□□□□□ -1.79
LMO1P25800 RPS15AP17-201ENST00000470598 390 ntBASIC3.88□□□□□ -1.79
LMO1P25800 RPL36AP41-201ENST00000493820 306 ntBASIC3.88□□□□□ -1.79
LMO1P25800 AC091885.1-201ENST00000506658 268 ntBASIC3.88□□□□□ -1.79
LMO1P25800 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms