Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.23□□□□□ -1.89
VCLP18206 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC3.23□□□□□ -1.89
VCLP18206 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC3.23□□□□□ -1.89
VCLP18206 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.23□□□□□ -1.89
VCLP18206 AL391001.1-201ENST00000602747 715 ntBASIC3.23□□□□□ -1.89
VCLP18206 AP000254.1-201ENST00000609934 520 ntBASIC3.23□□□□□ -1.89
VCLP18206 AL159972.1-201ENST00000625150 448 ntBASIC3.23□□□□□ -1.89
VCLP18206 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
VCLP18206 MIR4275-201ENST00000636486 87 ntBASIC3.23□□□□□ -1.89
VCLP18206 AC092447.10-201ENST00000620607 1652 ntBASIC3.23□□□□□ -1.89
VCLP18206 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
VCLP18206 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.22□□□□□ -1.89
VCLP18206 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
VCLP18206 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
VCLP18206 FAM133CP-201ENST00000332869 704 ntBASIC3.22□□□□□ -1.89
VCLP18206 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
VCLP18206 RNU6-744P-201ENST00000365557 107 ntBASIC3.22□□□□□ -1.89
VCLP18206 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
VCLP18206 RNU6-1316P-201ENST00000384242 108 ntBASIC3.22□□□□□ -1.89
VCLP18206 SAR1AP2-201ENST00000392696 594 ntBASIC3.22□□□□□ -1.89
VCLP18206 RNU4-47P-201ENST00000410876 114 ntBASIC3.22□□□□□ -1.89
VCLP18206 BX119904.4-201ENST00000424402 301 ntBASIC3.22□□□□□ -1.89
VCLP18206 USP9YP36-201ENST00000424581 829 ntBASIC3.22□□□□□ -1.89
VCLP18206 AL356867.1-201ENST00000429623 299 ntBASIC3.22□□□□□ -1.89
VCLP18206 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC3.22□□□□□ -1.89
VCLP18206 UBE2V1P13-201ENST00000436983 439 ntBASIC3.22□□□□□ -1.89
VCLP18206 ATP5C1P1-201ENST00000441945 895 ntBASIC3.22□□□□□ -1.89
VCLP18206 AC112653.1-201ENST00000443851 386 ntBASIC3.22□□□□□ -1.89
VCLP18206 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC3.22□□□□□ -1.89
VCLP18206 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.22□□□□□ -1.89
VCLP18206 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC3.22□□□□□ -1.89
VCLP18206 AL359385.1-201ENST00000456509 365 ntBASIC3.22□□□□□ -1.89
VCLP18206 snoU13.22-201ENST00000459428 104 ntBASIC3.22□□□□□ -1.89
VCLP18206 SNORD11.1-201ENST00000459482 85 ntBASIC3.22□□□□□ -1.89
VCLP18206 AP001025.2-201ENST00000490908 477 ntBASIC3.22□□□□□ -1.89
VCLP18206 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC3.22□□□□□ -1.89
VCLP18206 AC021678.1-201ENST00000505195 936 ntBASIC3.22□□□□□ -1.89
VCLP18206 AC118282.1-201ENST00000506408 765 ntBASIC3.22□□□□□ -1.89
VCLP18206 RNU5A-4P-201ENST00000516588 111 ntBASIC3.22□□□□□ -1.89
VCLP18206 SNORD59.2-201ENST00000516873 68 ntBASIC3.22□□□□□ -1.89
VCLP18206 SNORA31.26-201ENST00000517250 137 ntBASIC3.22□□□□□ -1.89
VCLP18206 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC3.22□□□□□ -1.89
VCLP18206 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC3.22□□□□□ -1.89
VCLP18206 AC007536.1-201ENST00000533382 349 ntBASIC3.22□□□□□ -1.89
VCLP18206 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC3.22□□□□□ -1.89
VCLP18206 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC3.22□□□□□ -1.89
VCLP18206 MIR5680-201ENST00000577577 84 ntBASIC3.22□□□□□ -1.89
VCLP18206 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC3.22□□□□□ -1.89
VCLP18206 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.22□□□□□ -1.89
VCLP18206 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC3.22□□□□□ -1.89
VCLP18206 AC004067.1-201ENST00000608733 700 ntBASIC3.22□□□□□ -1.89
VCLP18206 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.22□□□□□ -1.89
VCLP18206 AL050303.3-201ENST00000613704 284 ntBASIC3.22□□□□□ -1.89
VCLP18206 AL136981.2-201ENST00000617319 734 ntBASIC3.22□□□□□ -1.89
VCLP18206 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.22□□□□□ -1.89
VCLP18206 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
VCLP18206 MTND5P19-201ENST00000424872 1794 ntBASIC3.22□□□□□ -1.89
VCLP18206 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
VCLP18206 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.22□□□□□ -1.89
VCLP18206 API5P2-201ENST00000397055 1498 ntBASIC3.22□□□□□ -1.89
VCLP18206 ZNF876P-202ENST00000398732 1485 ntBASIC3.22□□□□□ -1.89
VCLP18206 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.21□□□□□ -1.89
VCLP18206 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.21□□□□□ -1.89
VCLP18206 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
VCLP18206 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.21□□□□□ -1.9
VCLP18206 PCF11-AS1-201ENST00000602322 1516 ntBASIC3.21□□□□□ -1.9
VCLP18206 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
VCLP18206 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
VCLP18206 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
VCLP18206 RNU1-70P-201ENST00000362618 164 ntBASIC3.21□□□□□ -1.9
VCLP18206 SNORA51.4-201ENST00000364993 124 ntBASIC3.21□□□□□ -1.9
VCLP18206 SNORA70.4-201ENST00000365509 134 ntBASIC3.21□□□□□ -1.9
VCLP18206 RNU6-83P-201ENST00000384568 112 ntBASIC3.21□□□□□ -1.9
VCLP18206 RNU6-1197P-201ENST00000391183 107 ntBASIC3.21□□□□□ -1.9
VCLP18206 AL354719.1-201ENST00000406535 843 ntBASIC3.21□□□□□ -1.9
VCLP18206 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC3.21□□□□□ -1.9
VCLP18206 AL353678.1-201ENST00000422735 741 ntBASIC3.21□□□□□ -1.9
VCLP18206 OR2AS1P-201ENST00000427827 319 ntBASIC3.21□□□□□ -1.9
VCLP18206 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC3.21□□□□□ -1.9
VCLP18206 AC005300.1-201ENST00000428401 373 ntBASIC3.21□□□□□ -1.9
VCLP18206 NDUFB4P6-201ENST00000436819 366 ntBASIC3.21□□□□□ -1.9
VCLP18206 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.21□□□□□ -1.9
VCLP18206 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
VCLP18206 RPS3AP12-201ENST00000443616 753 ntBASIC3.21□□□□□ -1.9
VCLP18206 RSL24D1P3-201ENST00000449255 495 ntBASIC3.21□□□□□ -1.9
VCLP18206 RPL23AP35-201ENST00000451906 501 ntBASIC3.21□□□□□ -1.9
VCLP18206 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC3.21□□□□□ -1.9
VCLP18206 HSPE1P6-201ENST00000479457 291 ntBASIC3.21□□□□□ -1.9
VCLP18206 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.21□□□□□ -1.9
VCLP18206 AHI1-208ENST00000488690 712 ntTSL 5 BASIC3.21□□□□□ -1.9
VCLP18206 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC3.21□□□□□ -1.9
VCLP18206 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
VCLP18206 RNA5SP217-201ENST00000515959 91 ntBASIC3.21□□□□□ -1.9
VCLP18206 RNU6-415P-201ENST00000516252 97 ntBASIC3.21□□□□□ -1.9
VCLP18206 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.21□□□□□ -1.9
VCLP18206 HMGN1P28-201ENST00000521340 364 ntBASIC3.21□□□□□ -1.9
VCLP18206 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.21□□□□□ -1.9
VCLP18206 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
VCLP18206 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.21□□□□□ -1.9
VCLP18206 DUXAP1-201ENST00000556632 463 ntBASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms