Protein–RNA interactions for Protein: P12270

TPR, Nucleoprotein TPR, humanhuman

Known RBP Predictions only

Length 2,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPRP12270 SNORA31.15-201ENST00000516771 132 ntBASIC1.59□□□□□ -2.16
TPRP12270 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC1.59□□□□□ -2.16
TPRP12270 CR383656.8-201ENST00000549046 145 ntBASIC1.59□□□□□ -2.16
TPRP12270 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
TPRP12270 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC1.59□□□□□ -2.16
TPRP12270 AC015720.1-201ENST00000565251 277 ntBASIC1.59□□□□□ -2.16
TPRP12270 MIR1273G-201ENST00000577677 100 ntBASIC1.59□□□□□ -2.16
TPRP12270 RN7SL793P-201ENST00000583259 296 ntBASIC1.59□□□□□ -2.16
TPRP12270 RBM12B-AS1-201ENST00000623283 653 ntBASIC1.59□□□□□ -2.16
TPRP12270 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.59□□□□□ -2.16
TPRP12270 AL096701.2-201ENST00000416920 238 ntBASIC1.58□□□□□ -2.16
TPRP12270 AC005297.2-201ENST00000450430 606 ntBASIC1.58□□□□□ -2.16
TPRP12270 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC1.58□□□□□ -2.16
TPRP12270 AC021146.7-201ENST00000509604 775 ntBASIC1.58□□□□□ -2.16
TPRP12270 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC1.58□□□□□ -2.16
TPRP12270 AC104581.2-201ENST00000572227 430 ntBASIC1.58□□□□□ -2.16
TPRP12270 AL160237.3-201ENST00000604114 1013 ntBASIC1.58□□□□□ -2.16
TPRP12270 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC1.58□□□□□ -2.16
TPRP12270 VIS1.1-201ENST00000610517 203 ntBASIC1.58□□□□□ -2.16
TPRP12270 AC010680.1-201ENST00000590024 3590 ntBASIC1.58□□□□□ -2.16
TPRP12270 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
TPRP12270 MIR517C-201ENST00000385103 95 ntBASIC1.58□□□□□ -2.16
TPRP12270 RNU6ATAC16P-201ENST00000408591 138 ntBASIC1.58□□□□□ -2.16
TPRP12270 USP9YP33-201ENST00000412220 421 ntBASIC1.58□□□□□ -2.16
TPRP12270 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC1.58□□□□□ -2.16
TPRP12270 USP9YP35-201ENST00000435696 412 ntBASIC1.58□□□□□ -2.16
TPRP12270 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC1.58□□□□□ -2.16
TPRP12270 RPPH1-2P-201ENST00000516688 293 ntBASIC1.58□□□□□ -2.16
TPRP12270 MTCO3P24-201ENST00000572729 782 ntBASIC1.58□□□□□ -2.16
TPRP12270 MIR5002-201ENST00000584713 97 ntBASIC1.58□□□□□ -2.16
TPRP12270 AL159169.2-201ENST00000610061 1269 ntBASIC1.58□□□□□ -2.16
TPRP12270 Xist_exon1.1-201ENST00000618930 85 ntBASIC1.58□□□□□ -2.16
TPRP12270 DDX43P2-201ENST00000604753 1354 ntBASIC1.57□□□□□ -2.16
TPRP12270 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
TPRP12270 RNA5SP138-201ENST00000365098 114 ntBASIC1.57□□□□□ -2.16
TPRP12270 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
TPRP12270 RPL30P3-201ENST00000424262 333 ntBASIC1.57□□□□□ -2.16
TPRP12270 AL445305.1-201ENST00000432577 575 ntBASIC1.57□□□□□ -2.16
TPRP12270 RPL21P2-201ENST00000440049 481 ntBASIC1.57□□□□□ -2.16
TPRP12270 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC1.57□□□□□ -2.16
TPRP12270 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC1.57□□□□□ -2.16
TPRP12270 GZMAP1-201ENST00000503054 631 ntBASIC1.57□□□□□ -2.16
TPRP12270 RNA5SP395-201ENST00000516567 118 ntBASIC1.57□□□□□ -2.16
TPRP12270 SNORA31.26-201ENST00000517250 137 ntBASIC1.57□□□□□ -2.16
TPRP12270 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.57□□□□□ -2.16
TPRP12270 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC1.57□□□□□ -2.16
TPRP12270 ABI1P1-201ENST00000603375 1120 ntBASIC1.57□□□□□ -2.16
TPRP12270 AL590095.2-201ENST00000604136 117 ntBASIC1.57□□□□□ -2.16
TPRP12270 AC008121.3-201ENST00000618726 433 ntBASIC1.57□□□□□ -2.16
TPRP12270 XIST_intron.1-201ENST00000619444 68 ntBASIC1.57□□□□□ -2.16
TPRP12270 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC1.57□□□□□ -2.16
TPRP12270 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC1.57□□□□□ -2.16
TPRP12270 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
TPRP12270 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC1.57□□□□□ -2.16
TPRP12270 MTND4LP12-201ENST00000448237 295 ntBASIC1.57□□□□□ -2.16
TPRP12270 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC1.57□□□□□ -2.16
TPRP12270 SUMO2P6-201ENST00000505273 288 ntBASIC1.57□□□□□ -2.16
TPRP12270 AC022790.1-201ENST00000522872 204 ntBASIC1.57□□□□□ -2.16
TPRP12270 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC1.57□□□□□ -2.16
TPRP12270 AP000787.2-201ENST00000604432 568 ntBASIC1.57□□□□□ -2.16
TPRP12270 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC1.57□□□□□ -2.16
TPRP12270 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC1.57□□□□□ -2.16
TPRP12270 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
TPRP12270 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
TPRP12270 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
TPRP12270 ZNF209P-201ENST00000593450 2304 ntBASIC1.56□□□□□ -2.16
TPRP12270 Y_RNA.115-201ENST00000363272 98 ntBASIC1.56□□□□□ -2.16
TPRP12270 Y_RNA.471-201ENST00000384312 102 ntBASIC1.56□□□□□ -2.16
TPRP12270 U3.37-201ENST00000408528 213 ntBASIC1.56□□□□□ -2.16
TPRP12270 RNU6-603P-201ENST00000411403 107 ntBASIC1.56□□□□□ -2.16
TPRP12270 AF274854.1-201ENST00000413236 615 ntBASIC1.56□□□□□ -2.16
TPRP12270 PTP4A1P1-201ENST00000420539 515 ntBASIC1.56□□□□□ -2.16
TPRP12270 RPS3AP44-201ENST00000425466 790 ntBASIC1.56□□□□□ -2.16
TPRP12270 AC234781.2-201ENST00000426370 994 ntBASIC1.56□□□□□ -2.16
TPRP12270 AL157827.1-201ENST00000447622 132 ntBASIC1.56□□□□□ -2.16
TPRP12270 AC025033.1-201ENST00000463883 194 ntBASIC1.56□□□□□ -2.16
TPRP12270 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC1.56□□□□□ -2.16
TPRP12270 RNA5SP402-201ENST00000517148 110 ntBASIC1.56□□□□□ -2.16
TPRP12270 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC1.56□□□□□ -2.16
TPRP12270 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC1.56□□□□□ -2.16
TPRP12270 RMST_6.1-201ENST00000611980 203 ntBASIC1.56□□□□□ -2.16
TPRP12270 AC012150.2-201ENST00000621300 544 ntBASIC1.56□□□□□ -2.16
TPRP12270 AC091895.1-201ENST00000624494 256 ntBASIC1.56□□□□□ -2.16
TPRP12270 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC1.56□□□□□ -2.16
TPRP12270 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
TPRP12270 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC1.56□□□□□ -2.16
TPRP12270 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC1.56□□□□□ -2.16
TPRP12270 RNA5SP160-201ENST00000364866 120 ntBASIC1.56□□□□□ -2.16
TPRP12270 MIR1323-201ENST00000408090 73 ntBASIC1.56□□□□□ -2.16
TPRP12270 RNU2-37P-201ENST00000410695 177 ntBASIC1.56□□□□□ -2.16
TPRP12270 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.56□□□□□ -2.16
TPRP12270 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC1.56□□□□□ -2.16
TPRP12270 AC006483.1-201ENST00000487308 313 ntBASIC1.56□□□□□ -2.16
TPRP12270 AC109464.2-201ENST00000510242 943 ntBASIC1.56□□□□□ -2.16
TPRP12270 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.56□□□□□ -2.16
TPRP12270 SNORD116-26-201ENST00000516006 96 ntBASIC1.56□□□□□ -2.16
TPRP12270 AC013562.2-201ENST00000611632 603 ntBASIC1.56□□□□□ -2.16
TPRP12270 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC1.56□□□□□ -2.16
TPRP12270 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC1.55□□□□□ -2.16
TPRP12270 RPL23AP29-201ENST00000397284 453 ntBASIC1.55□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms