Protein–RNA interactions for Protein: P08670

VIM, Vimentin, humanhuman

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIMP08670 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
VIMP08670 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.28□□□□□ -1.88
VIMP08670 Y_RNA.302-201ENST00000364997 102 ntBASIC3.28□□□□□ -1.88
VIMP08670 U8.9-201ENST00000365667 134 ntBASIC3.28□□□□□ -1.88
VIMP08670 FAT1P1-201ENST00000406588 507 ntBASIC3.28□□□□□ -1.88
VIMP08670 AC098592.1-201ENST00000419352 333 ntBASIC3.28□□□□□ -1.88
VIMP08670 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.28□□□□□ -1.88
VIMP08670 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.28□□□□□ -1.88
VIMP08670 UBE2FP3-201ENST00000436366 524 ntBASIC3.28□□□□□ -1.88
VIMP08670 NDUFB4P6-201ENST00000436819 366 ntBASIC3.28□□□□□ -1.88
VIMP08670 AL008629.1-201ENST00000438615 184 ntBASIC3.28□□□□□ -1.88
VIMP08670 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.28□□□□□ -1.88
VIMP08670 MTCYBP3-201ENST00000445588 1137 ntBASIC3.28□□□□□ -1.88
VIMP08670 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC3.28□□□□□ -1.88
VIMP08670 AL590639.1-201ENST00000456484 337 ntBASIC3.28□□□□□ -1.88
VIMP08670 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC3.28□□□□□ -1.88
VIMP08670 RN7SL385P-201ENST00000468873 276 ntBASIC3.28□□□□□ -1.88
VIMP08670 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.28□□□□□ -1.88
VIMP08670 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC3.28□□□□□ -1.88
VIMP08670 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC3.28□□□□□ -1.88
VIMP08670 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC3.28□□□□□ -1.88
VIMP08670 AC087276.1-201ENST00000529659 480 ntBASIC3.28□□□□□ -1.88
VIMP08670 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.28□□□□□ -1.88
VIMP08670 AC013828.2-201ENST00000532487 235 ntBASIC3.28□□□□□ -1.88
VIMP08670 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.28□□□□□ -1.88
VIMP08670 ARL6IP1P1-201ENST00000545836 610 ntBASIC3.28□□□□□ -1.88
VIMP08670 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.28□□□□□ -1.88
VIMP08670 AC007224.1-201ENST00000564410 144 ntBASIC3.28□□□□□ -1.88
VIMP08670 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.28□□□□□ -1.88
VIMP08670 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.28□□□□□ -1.88
VIMP08670 ANKRD36BP2-206ENST00000575193 1245 ntBASIC3.28□□□□□ -1.88
VIMP08670 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC3.28□□□□□ -1.88
VIMP08670 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC3.28□□□□□ -1.88
VIMP08670 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC3.28□□□□□ -1.88
VIMP08670 AC060771.1-201ENST00000582031 164 ntBASIC3.28□□□□□ -1.88
VIMP08670 MIR544B-201ENST00000582372 78 ntBASIC3.28□□□□□ -1.88
VIMP08670 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC3.28□□□□□ -1.88
VIMP08670 AC078899.3-201ENST00000599065 212 ntBASIC3.28□□□□□ -1.88
VIMP08670 AL357094.1-201ENST00000603845 844 ntBASIC3.28□□□□□ -1.88
VIMP08670 AC018714.1-201ENST00000605028 208 ntBASIC3.28□□□□□ -1.88
VIMP08670 AC103710.4-201ENST00000609301 899 ntBASIC3.28□□□□□ -1.88
VIMP08670 AC131902.3-201ENST00000611767 581 ntBASIC3.28□□□□□ -1.88
VIMP08670 AC024941.1-201ENST00000612250 334 ntBASIC3.28□□□□□ -1.88
VIMP08670 AL031667.3-201ENST00000620124 655 ntBASIC3.28□□□□□ -1.88
VIMP08670 AC009268.2-201ENST00000621925 457 ntBASIC3.28□□□□□ -1.88
VIMP08670 AP000676.4-201ENST00000624659 623 ntBASIC3.28□□□□□ -1.88
VIMP08670 AC099063.3-201ENST00000642066 185 ntBASIC3.28□□□□□ -1.88
VIMP08670 AC108206.1-201ENST00000570186 4159 ntBASIC3.28□□□□□ -1.88
VIMP08670 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
VIMP08670 AC008568.2-201ENST00000623862 2313 ntBASIC3.28□□□□□ -1.88
VIMP08670 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.28□□□□□ -1.88
VIMP08670 CR383658.2-201ENST00000547576 1525 ntBASIC3.28□□□□□ -1.88
VIMP08670 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.28□□□□□ -1.88
VIMP08670 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
VIMP08670 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
VIMP08670 MTND4P16-201ENST00000466108 1367 ntBASIC3.27□□□□□ -1.89
VIMP08670 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
VIMP08670 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
VIMP08670 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
VIMP08670 AC009902.3-201ENST00000606235 2172 ntBASIC3.27□□□□□ -1.89
VIMP08670 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.27□□□□□ -1.89
VIMP08670 Y_RNA.18-201ENST00000362461 102 ntBASIC3.27□□□□□ -1.89
VIMP08670 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
VIMP08670 SNORA36C-201ENST00000384289 132 ntBASIC3.27□□□□□ -1.89
VIMP08670 MIR1305-201ENST00000408300 86 ntBASIC3.27□□□□□ -1.89
VIMP08670 RNU6-516P-201ENST00000411381 104 ntBASIC3.27□□□□□ -1.89
VIMP08670 TPMTP3-201ENST00000411928 735 ntBASIC3.27□□□□□ -1.89
VIMP08670 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC3.27□□□□□ -1.89
VIMP08670 BX842559.1-201ENST00000419615 532 ntBASIC3.27□□□□□ -1.89
VIMP08670 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
VIMP08670 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC3.27□□□□□ -1.89
VIMP08670 CDC27P1-201ENST00000445384 715 ntBASIC3.27□□□□□ -1.89
VIMP08670 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.27□□□□□ -1.89
VIMP08670 AL049874.1-201ENST00000489560 388 ntBASIC3.27□□□□□ -1.89
VIMP08670 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.27□□□□□ -1.89
VIMP08670 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC3.27□□□□□ -1.89
VIMP08670 RN7SKP18-201ENST00000516005 275 ntBASIC3.27□□□□□ -1.89
VIMP08670 RNU6-798P-201ENST00000516912 103 ntBASIC3.27□□□□□ -1.89
VIMP08670 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC3.27□□□□□ -1.89
VIMP08670 AP004247.1-201ENST00000531556 1289 ntBASIC3.27□□□□□ -1.89
VIMP08670 AL133271.1-201ENST00000538229 291 ntBASIC3.27□□□□□ -1.89
VIMP08670 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC3.27□□□□□ -1.89
VIMP08670 ISCA1P3-201ENST00000577104 373 ntBASIC3.27□□□□□ -1.89
VIMP08670 AC006116.10-201ENST00000591836 581 ntBASIC3.27□□□□□ -1.89
VIMP08670 AC087683.2-201ENST00000611384 326 ntBASIC3.27□□□□□ -1.89
VIMP08670 AC079597.1-201ENST00000624306 508 ntBASIC3.27□□□□□ -1.89
VIMP08670 AL159972.1-201ENST00000625150 448 ntBASIC3.27□□□□□ -1.89
VIMP08670 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.27□□□□□ -1.89
VIMP08670 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.26□□□□□ -1.89
VIMP08670 RNA5SP119-201ENST00000362715 117 ntBASIC3.26□□□□□ -1.89
VIMP08670 RPS4XP3-201ENST00000398541 413 ntBASIC3.26□□□□□ -1.89
VIMP08670 AL590084.2-201ENST00000401481 382 ntBASIC3.26□□□□□ -1.89
VIMP08670 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC3.26□□□□□ -1.89
VIMP08670 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC3.26□□□□□ -1.89
VIMP08670 AC018630.2-202ENST00000422992 927 ntBASIC3.26□□□□□ -1.89
VIMP08670 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.26□□□□□ -1.89
VIMP08670 TMEM167AP1-201ENST00000423409 219 ntBASIC3.26□□□□□ -1.89
VIMP08670 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC3.26□□□□□ -1.89
VIMP08670 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.26□□□□□ -1.89
VIMP08670 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 137.2 ms