Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 USP9YP27-201ENST00000418455 438 ntBASIC2.4□□□□□ -2.03
APOEP02649 PNRC2P1-201ENST00000423940 420 ntBASIC2.4□□□□□ -2.03
APOEP02649 MYL8P-204ENST00000431574 518 ntBASIC2.4□□□□□ -2.03
APOEP02649 RPS15AP28-201ENST00000435088 386 ntBASIC2.4□□□□□ -2.03
APOEP02649 AL590762.3-201ENST00000436372 640 ntBASIC2.4□□□□□ -2.03
APOEP02649 NDUFB4P6-201ENST00000436819 366 ntBASIC2.4□□□□□ -2.03
APOEP02649 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC2.4□□□□□ -2.03
APOEP02649 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC2.4□□□□□ -2.03
APOEP02649 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC2.4□□□□□ -2.03
APOEP02649 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.4□□□□□ -2.03
APOEP02649 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.4□□□□□ -2.03
APOEP02649 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.4□□□□□ -2.03
APOEP02649 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.4□□□□□ -2.03
APOEP02649 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
APOEP02649 AC078814.3-201ENST00000553036 491 ntBASIC2.4□□□□□ -2.03
APOEP02649 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2.4□□□□□ -2.03
APOEP02649 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC2.4□□□□□ -2.03
APOEP02649 SNORD53-201ENST00000579969 78 ntBASIC2.4□□□□□ -2.03
APOEP02649 AL355802.4-201ENST00000607635 548 ntBASIC2.4□□□□□ -2.03
APOEP02649 MIR6840-201ENST00000611937 71 ntBASIC2.4□□□□□ -2.03
APOEP02649 AL590808.1-201ENST00000618696 141 ntBASIC2.4□□□□□ -2.03
APOEP02649 MIR203B-201ENST00000636080 86 ntBASIC2.4□□□□□ -2.03
APOEP02649 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
APOEP02649 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
APOEP02649 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
APOEP02649 AC025263.3-201ENST00000622965 1396 ntBASIC2.39□□□□□ -2.03
APOEP02649 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
APOEP02649 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
APOEP02649 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
APOEP02649 RNU1-91P-201ENST00000364746 163 ntBASIC2.39□□□□□ -2.03
APOEP02649 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC2.39□□□□□ -2.03
APOEP02649 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
APOEP02649 U3.29-201ENST00000391296 212 ntBASIC2.39□□□□□ -2.03
APOEP02649 AL589655.1-201ENST00000405398 482 ntBASIC2.39□□□□□ -2.03
APOEP02649 ARL2BPP3-201ENST00000421226 480 ntBASIC2.39□□□□□ -2.03
APOEP02649 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.39□□□□□ -2.03
APOEP02649 AL589880.1-201ENST00000448271 287 ntBASIC2.39□□□□□ -2.03
APOEP02649 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.39□□□□□ -2.03
APOEP02649 PNPLA4P1-201ENST00000458328 305 ntBASIC2.39□□□□□ -2.03
APOEP02649 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.39□□□□□ -2.03
APOEP02649 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.39□□□□□ -2.03
APOEP02649 MTCYBP20-201ENST00000524239 1129 ntBASIC2.39□□□□□ -2.03
APOEP02649 AC009063.1-201ENST00000563342 702 ntBASIC2.39□□□□□ -2.03
APOEP02649 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC2.39□□□□□ -2.03
APOEP02649 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC2.39□□□□□ -2.03
APOEP02649 AC055876.5-201ENST00000605667 259 ntBASIC2.39□□□□□ -2.03
APOEP02649 BX322635.1-201ENST00000605804 496 ntBASIC2.39□□□□□ -2.03
APOEP02649 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.39□□□□□ -2.03
APOEP02649 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.39□□□□□ -2.03
APOEP02649 AP006248.3-201ENST00000623580 594 ntBASIC2.39□□□□□ -2.03
APOEP02649 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.39□□□□□ -2.03
APOEP02649 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
APOEP02649 AC012321.1-201ENST00000561622 1588 ntBASIC2.39□□□□□ -2.03
APOEP02649 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
APOEP02649 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
APOEP02649 RNU1-73P-201ENST00000383971 164 ntBASIC2.38□□□□□ -2.03
APOEP02649 MIR524-201ENST00000385242 87 ntBASIC2.38□□□□□ -2.03
APOEP02649 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
APOEP02649 RSL24D1P4-201ENST00000400938 484 ntBASIC2.38□□□□□ -2.03
APOEP02649 AL136372.1-201ENST00000403060 228 ntBASIC2.38□□□□□ -2.03
APOEP02649 AF274854.1-201ENST00000413236 615 ntBASIC2.38□□□□□ -2.03
APOEP02649 AL135786.1-201ENST00000415892 214 ntBASIC2.38□□□□□ -2.03
APOEP02649 AC006020.1-201ENST00000420179 1854 ntBASIC2.38□□□□□ -2.03
APOEP02649 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC2.38□□□□□ -2.03
APOEP02649 EZH2P1-201ENST00000431167 291 ntBASIC2.38□□□□□ -2.03
APOEP02649 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC2.38□□□□□ -2.03
APOEP02649 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC2.38□□□□□ -2.03
APOEP02649 MTND4LP10-201ENST00000435146 291 ntBASIC2.38□□□□□ -2.03
APOEP02649 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC2.38□□□□□ -2.03
APOEP02649 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.38□□□□□ -2.03
APOEP02649 PGBD4P3-201ENST00000440731 581 ntBASIC2.38□□□□□ -2.03
APOEP02649 AL121871.1-201ENST00000443413 436 ntBASIC2.38□□□□□ -2.03
APOEP02649 AL031659.1-201ENST00000447075 539 ntBASIC2.38□□□□□ -2.03
APOEP02649 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.38□□□□□ -2.03
APOEP02649 AC091917.2-201ENST00000505002 744 ntBASIC2.38□□□□□ -2.03
APOEP02649 RNA5SP471-201ENST00000516971 106 ntBASIC2.38□□□□□ -2.03
APOEP02649 CASP1P1-201ENST00000526345 212 ntBASIC2.38□□□□□ -2.03
APOEP02649 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC2.38□□□□□ -2.03
APOEP02649 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC2.38□□□□□ -2.03
APOEP02649 ATP5F1P7-201ENST00000567330 760 ntBASIC2.38□□□□□ -2.03
APOEP02649 MIR3609-201ENST00000582661 80 ntBASIC2.38□□□□□ -2.03
APOEP02649 SNORD39.3-201ENST00000584451 71 ntBASIC2.38□□□□□ -2.03
APOEP02649 AP004247.3-201ENST00000608682 624 ntBASIC2.38□□□□□ -2.03
APOEP02649 AC027309.3-201ENST00000623419 351 ntBASIC2.38□□□□□ -2.03
APOEP02649 AC005336.3-201ENST00000623833 2679 ntBASIC2.38□□□□□ -2.03
APOEP02649 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.37□□□□□ -2.03
APOEP02649 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
APOEP02649 RPL21P132-201ENST00000331267 462 ntBASIC2.37□□□□□ -2.03
APOEP02649 BTF3P7-201ENST00000407097 488 ntBASIC2.37□□□□□ -2.03
APOEP02649 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.37□□□□□ -2.03
APOEP02649 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.37□□□□□ -2.03
APOEP02649 MTND1P23-201ENST00000416931 372 ntBASIC2.37□□□□□ -2.03
APOEP02649 AC009414.1-201ENST00000427200 443 ntBASIC2.37□□□□□ -2.03
APOEP02649 ZNF965P-201ENST00000432501 817 ntBASIC2.37□□□□□ -2.03
APOEP02649 AC092573.2-201ENST00000434546 243 ntBASIC2.37□□□□□ -2.03
APOEP02649 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.37□□□□□ -2.03
APOEP02649 TRBV26-201ENST00000456572 344 ntBASIC2.37□□□□□ -2.03
APOEP02649 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC2.37□□□□□ -2.03
APOEP02649 AC090096.1-201ENST00000489168 390 ntBASIC2.37□□□□□ -2.03
APOEP02649 RPL23AP49-201ENST00000492925 468 ntBASIC2.37□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms