Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC3.37□□□□□ -1.87
COL2A1P02458 RNU6-405P-201ENST00000516637 110 ntBASIC3.37□□□□□ -1.87
COL2A1P02458 ADI1P3-201ENST00000549509 470 ntBASIC3.37□□□□□ -1.87
COL2A1P02458 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC3.37□□□□□ -1.87
COL2A1P02458 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.37□□□□□ -1.87
COL2A1P02458 OR4G1P-201ENST00000588632 938 ntBASIC3.37□□□□□ -1.87
COL2A1P02458 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC3.37□□□□□ -1.87
COL2A1P02458 AL592221.1-201ENST00000605266 382 ntBASIC3.37□□□□□ -1.87
COL2A1P02458 AC011374.2-201ENST00000607135 526 ntBASIC3.37□□□□□ -1.87
COL2A1P02458 AL592494.3-201ENST00000609485 464 ntBASIC3.37□□□□□ -1.87
COL2A1P02458 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC3.37□□□□□ -1.87
COL2A1P02458 AP001005.3-201ENST00000622049 129 ntBASIC3.37□□□□□ -1.87
COL2A1P02458 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
COL2A1P02458 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC3.37□□□□□ -1.87
COL2A1P02458 AC107081.3-201ENST00000612715 2034 ntBASIC3.37□□□□□ -1.87
COL2A1P02458 ELF2P3-201ENST00000445099 1506 ntBASIC3.37□□□□□ -1.87
COL2A1P02458 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
COL2A1P02458 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.36□□□□□ -1.87
COL2A1P02458 AL391994.1-201ENST00000254724 282 ntBASIC3.36□□□□□ -1.87
COL2A1P02458 RNU6-805P-201ENST00000365643 106 ntBASIC3.36□□□□□ -1.87
COL2A1P02458 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
COL2A1P02458 SNORA75-201ENST00000384158 137 ntBASIC3.36□□□□□ -1.87
COL2A1P02458 SNORA67.4-201ENST00000384688 142 ntBASIC3.36□□□□□ -1.87
COL2A1P02458 RNU6-244P-201ENST00000391028 104 ntBASIC3.36□□□□□ -1.87
COL2A1P02458 DNAJC19P6-201ENST00000401853 280 ntBASIC3.36□□□□□ -1.87
COL2A1P02458 RNA5SP508-201ENST00000411327 119 ntBASIC3.36□□□□□ -1.87
COL2A1P02458 DNAJA1P2-201ENST00000421360 1197 ntBASIC3.36□□□□□ -1.87
COL2A1P02458 AL022400.1-201ENST00000423946 935 ntBASIC3.36□□□□□ -1.87
COL2A1P02458 MTND4P28-201ENST00000426217 387 ntBASIC3.36□□□□□ -1.87
COL2A1P02458 MTND1P2-201ENST00000430604 821 ntBASIC3.36□□□□□ -1.87
COL2A1P02458 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC3.36□□□□□ -1.87
COL2A1P02458 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC3.36□□□□□ -1.87
COL2A1P02458 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC3.36□□□□□ -1.87
COL2A1P02458 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.36□□□□□ -1.87
COL2A1P02458 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC3.36□□□□□ -1.87
COL2A1P02458 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC3.36□□□□□ -1.87
COL2A1P02458 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC3.36□□□□□ -1.87
COL2A1P02458 RPL7L1P1-201ENST00000448259 785 ntBASIC3.36□□□□□ -1.87
COL2A1P02458 MRPL42P4-201ENST00000453267 443 ntBASIC3.36□□□□□ -1.87
COL2A1P02458 RPL21P134-201ENST00000453468 483 ntBASIC3.36□□□□□ -1.87
COL2A1P02458 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC3.36□□□□□ -1.87
COL2A1P02458 CREM-226ENST00000469949 721 ntTSL 3 BASIC3.36□□□□□ -1.87
COL2A1P02458 AC072039.1-201ENST00000477611 581 ntBASIC3.36□□□□□ -1.87
COL2A1P02458 RPL7P18-201ENST00000478965 734 ntBASIC3.36□□□□□ -1.87
COL2A1P02458 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.36□□□□□ -1.87
COL2A1P02458 RNU4-29P-201ENST00000515943 174 ntBASIC3.36□□□□□ -1.87
COL2A1P02458 RNU6-507P-201ENST00000516045 100 ntBASIC3.36□□□□□ -1.87
COL2A1P02458 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC3.36□□□□□ -1.87
COL2A1P02458 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.36□□□□□ -1.87
COL2A1P02458 ATP5F1P5-201ENST00000526403 760 ntBASIC3.36□□□□□ -1.87
COL2A1P02458 AC109635.3-201ENST00000529536 185 ntBASIC3.36□□□□□ -1.87
COL2A1P02458 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
COL2A1P02458 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.36□□□□□ -1.87
COL2A1P02458 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC3.36□□□□□ -1.87
COL2A1P02458 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC3.36□□□□□ -1.87
COL2A1P02458 AC074051.3-201ENST00000570238 358 ntBASIC3.36□□□□□ -1.87
COL2A1P02458 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC3.36□□□□□ -1.87
COL2A1P02458 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC3.36□□□□□ -1.87
COL2A1P02458 AC091135.1-201ENST00000585943 307 ntBASIC3.36□□□□□ -1.87
COL2A1P02458 AL137072.1-201ENST00000603444 466 ntBASIC3.36□□□□□ -1.87
COL2A1P02458 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC3.36□□□□□ -1.87
COL2A1P02458 AC018714.1-201ENST00000605028 208 ntBASIC3.36□□□□□ -1.87
COL2A1P02458 AC091946.2-201ENST00000606105 291 ntBASIC3.36□□□□□ -1.87
COL2A1P02458 OR6R2P-201ENST00000609216 300 ntBASIC3.36□□□□□ -1.87
COL2A1P02458 AL157786.1-207ENST00000627771 695 ntBASIC3.36□□□□□ -1.87
COL2A1P02458 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.36□□□□□ -1.87
COL2A1P02458 OR5AK4P-201ENST00000635912 903 ntBASIC3.36□□□□□ -1.87
COL2A1P02458 MIR4278-201ENST00000636094 69 ntBASIC3.36□□□□□ -1.87
COL2A1P02458 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
COL2A1P02458 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
COL2A1P02458 MTCO1P18-201ENST00000455518 1419 ntBASIC3.36□□□□□ -1.87
COL2A1P02458 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
COL2A1P02458 MIR887-201ENST00000401258 79 ntBASIC3.35□□□□□ -1.87
COL2A1P02458 AL079342.2-201ENST00000403367 482 ntBASIC3.35□□□□□ -1.87
COL2A1P02458 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC3.35□□□□□ -1.87
COL2A1P02458 AC245054.2-201ENST00000415639 319 ntBASIC3.35□□□□□ -1.87
COL2A1P02458 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC3.35□□□□□ -1.87
COL2A1P02458 B3GALNT1P1-201ENST00000420569 975 ntBASIC3.35□□□□□ -1.87
COL2A1P02458 CYCSP46-201ENST00000423569 204 ntBASIC3.35□□□□□ -1.87
COL2A1P02458 ZNF863P-201ENST00000426746 417 ntBASIC3.35□□□□□ -1.87
COL2A1P02458 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC3.35□□□□□ -1.87
COL2A1P02458 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC3.35□□□□□ -1.87
COL2A1P02458 AC234064.1-201ENST00000436312 247 ntBASIC3.35□□□□□ -1.87
COL2A1P02458 AC098614.3-201ENST00000438957 440 ntBASIC3.35□□□□□ -1.87
COL2A1P02458 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC3.35□□□□□ -1.87
COL2A1P02458 AL050341.1-201ENST00000447743 313 ntBASIC3.35□□□□□ -1.87
COL2A1P02458 UQCRHP3-201ENST00000451503 251 ntBASIC3.35□□□□□ -1.87
COL2A1P02458 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC3.35□□□□□ -1.87
COL2A1P02458 SUMO2P2-201ENST00000456482 255 ntBASIC3.35□□□□□ -1.87
COL2A1P02458 AC092989.1-201ENST00000481235 277 ntBASIC3.35□□□□□ -1.87
COL2A1P02458 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC3.35□□□□□ -1.87
COL2A1P02458 AC098799.2-201ENST00000509466 868 ntBASIC3.35□□□□□ -1.87
COL2A1P02458 AC109471.1-201ENST00000511631 612 ntBASIC3.35□□□□□ -1.87
COL2A1P02458 RNU6-991P-201ENST00000516168 107 ntBASIC3.35□□□□□ -1.87
COL2A1P02458 AC106038.2-201ENST00000520706 568 ntBASIC3.35□□□□□ -1.87
COL2A1P02458 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC3.35□□□□□ -1.87
COL2A1P02458 ANP32BP3-201ENST00000559213 706 ntBASIC3.35□□□□□ -1.87
COL2A1P02458 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC3.35□□□□□ -1.87
COL2A1P02458 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.35□□□□□ -1.87
COL2A1P02458 AP004372.1-201ENST00000604842 844 ntBASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 173.7 ms