Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 MTND3P12-201ENST00000559068 328 ntBASIC3.25□□□□□ -1.89
PDGFBP01127 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.25□□□□□ -1.89
PDGFBP01127 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.25□□□□□ -1.89
PDGFBP01127 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.25□□□□□ -1.89
PDGFBP01127 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.25□□□□□ -1.89
PDGFBP01127 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
PDGFBP01127 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
PDGFBP01127 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
PDGFBP01127 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
PDGFBP01127 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
PDGFBP01127 FRG1BP-201ENST00000278882 761 ntBASIC3.24□□□□□ -1.89
PDGFBP01127 Y_RNA.311-201ENST00000365068 96 ntBASIC3.24□□□□□ -1.89
PDGFBP01127 MIR493-201ENST00000385254 89 ntBASIC3.24□□□□□ -1.89
PDGFBP01127 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
PDGFBP01127 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC3.24□□□□□ -1.89
PDGFBP01127 XKRYP1-201ENST00000423438 492 ntBASIC3.24□□□□□ -1.89
PDGFBP01127 AC007742.1-201ENST00000425789 329 ntBASIC3.24□□□□□ -1.89
PDGFBP01127 AC022018.1-201ENST00000430685 241 ntBASIC3.24□□□□□ -1.89
PDGFBP01127 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC3.24□□□□□ -1.89
PDGFBP01127 XKRYP2-201ENST00000432915 492 ntBASIC3.24□□□□□ -1.89
PDGFBP01127 ELOCP26-201ENST00000436067 329 ntBASIC3.24□□□□□ -1.89
PDGFBP01127 RAC1P7-201ENST00000445367 377 ntBASIC3.24□□□□□ -1.89
PDGFBP01127 MTCO2P25-201ENST00000447065 681 ntBASIC3.24□□□□□ -1.89
PDGFBP01127 Z73417.1-201ENST00000447373 778 ntBASIC3.24□□□□□ -1.89
PDGFBP01127 HMGB3P8-201ENST00000449709 577 ntBASIC3.24□□□□□ -1.89
PDGFBP01127 AC005297.2-201ENST00000450430 606 ntBASIC3.24□□□□□ -1.89
PDGFBP01127 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
PDGFBP01127 AC108860.1-201ENST00000484521 383 ntBASIC3.24□□□□□ -1.89
PDGFBP01127 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC3.24□□□□□ -1.89
PDGFBP01127 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.24□□□□□ -1.89
PDGFBP01127 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
PDGFBP01127 BTF3L4P4-201ENST00000506381 449 ntBASIC3.24□□□□□ -1.89
PDGFBP01127 MTND4LP22-201ENST00000508209 276 ntBASIC3.24□□□□□ -1.89
PDGFBP01127 AL359273.1-201ENST00000510918 627 ntBASIC3.24□□□□□ -1.89
PDGFBP01127 AC079395.1-201ENST00000510981 262 ntBASIC3.24□□□□□ -1.89
PDGFBP01127 AC022483.1-201ENST00000514020 567 ntBASIC3.24□□□□□ -1.89
PDGFBP01127 RNA5SP367-201ENST00000516557 118 ntBASIC3.24□□□□□ -1.89
PDGFBP01127 COX6CP8-201ENST00000522620 226 ntBASIC3.24□□□□□ -1.89
PDGFBP01127 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC3.24□□□□□ -1.89
PDGFBP01127 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.24□□□□□ -1.89
PDGFBP01127 MTCO2P15-201ENST00000532655 656 ntBASIC3.24□□□□□ -1.89
PDGFBP01127 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
PDGFBP01127 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
PDGFBP01127 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC3.24□□□□□ -1.89
PDGFBP01127 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC3.24□□□□□ -1.89
PDGFBP01127 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.24□□□□□ -1.89
PDGFBP01127 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC3.24□□□□□ -1.89
PDGFBP01127 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.24□□□□□ -1.89
PDGFBP01127 AC090615.1-201ENST00000577519 154 ntBASIC3.24□□□□□ -1.89
PDGFBP01127 AC015917.1-201ENST00000579654 510 ntBASIC3.24□□□□□ -1.89
PDGFBP01127 ELOCP29-201ENST00000588193 334 ntBASIC3.24□□□□□ -1.89
PDGFBP01127 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.24□□□□□ -1.89
PDGFBP01127 AC025588.2-201ENST00000604851 466 ntBASIC3.24□□□□□ -1.89
PDGFBP01127 TUSC7.1-201ENST00000610969 165 ntBASIC3.24□□□□□ -1.89
PDGFBP01127 AL157817.1-201ENST00000614264 790 ntBASIC3.24□□□□□ -1.89
PDGFBP01127 AL596245.1-201ENST00000618994 362 ntBASIC3.24□□□□□ -1.89
PDGFBP01127 AL607023.1-201ENST00000620045 248 ntBASIC3.24□□□□□ -1.89
PDGFBP01127 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC3.24□□□□□ -1.89
PDGFBP01127 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.24□□□□□ -1.89
PDGFBP01127 AC000403.1-201ENST00000613696 3585 ntBASIC3.24□□□□□ -1.89
PDGFBP01127 AC092326.2-201ENST00000624772 1561 ntBASIC3.24□□□□□ -1.89
PDGFBP01127 FAM133CP-201ENST00000332869 704 ntBASIC3.23□□□□□ -1.89
PDGFBP01127 AC062016.1-201ENST00000355719 319 ntBASIC3.23□□□□□ -1.89
PDGFBP01127 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
PDGFBP01127 HMGN2P8-201ENST00000391458 268 ntBASIC3.23□□□□□ -1.89
PDGFBP01127 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.23□□□□□ -1.89
PDGFBP01127 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
PDGFBP01127 RPS4XP8-201ENST00000402039 771 ntBASIC3.23□□□□□ -1.89
PDGFBP01127 RNA5SP38-201ENST00000410750 119 ntBASIC3.23□□□□□ -1.89
PDGFBP01127 RNA5SP184-201ENST00000411071 108 ntBASIC3.23□□□□□ -1.89
PDGFBP01127 RNA5SP508-201ENST00000411327 119 ntBASIC3.23□□□□□ -1.89
PDGFBP01127 SSXP9-201ENST00000417503 292 ntBASIC3.23□□□□□ -1.89
PDGFBP01127 TIMM9P2-201ENST00000419324 266 ntBASIC3.23□□□□□ -1.89
PDGFBP01127 AL139281.1-201ENST00000422120 335 ntBASIC3.23□□□□□ -1.89
PDGFBP01127 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC3.23□□□□□ -1.89
PDGFBP01127 NUP35P1-201ENST00000422734 947 ntBASIC3.23□□□□□ -1.89
PDGFBP01127 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC3.23□□□□□ -1.89
PDGFBP01127 USP9YP11-201ENST00000427537 717 ntBASIC3.23□□□□□ -1.89
PDGFBP01127 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC3.23□□□□□ -1.89
PDGFBP01127 AL513124.1-201ENST00000450410 614 ntBASIC3.23□□□□□ -1.89
PDGFBP01127 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.23□□□□□ -1.89
PDGFBP01127 AL109933.2-201ENST00000452651 260 ntBASIC3.23□□□□□ -1.89
PDGFBP01127 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC3.23□□□□□ -1.89
PDGFBP01127 RPL7P18-201ENST00000478965 734 ntBASIC3.23□□□□□ -1.89
PDGFBP01127 AC021146.5-201ENST00000503544 545 ntBASIC3.23□□□□□ -1.89
PDGFBP01127 MTCYBP35-201ENST00000503630 1137 ntBASIC3.23□□□□□ -1.89
PDGFBP01127 TMEM251P1-201ENST00000503717 318 ntBASIC3.23□□□□□ -1.89
PDGFBP01127 AC111000.2-201ENST00000507775 550 ntBASIC3.23□□□□□ -1.89
PDGFBP01127 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC3.23□□□□□ -1.89
PDGFBP01127 RNU6-583P-201ENST00000516012 92 ntBASIC3.23□□□□□ -1.89
PDGFBP01127 SNORA70.16-201ENST00000516390 95 ntBASIC3.23□□□□□ -1.89
PDGFBP01127 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.23□□□□□ -1.89
PDGFBP01127 AP006245.1-201ENST00000522549 120 ntBASIC3.23□□□□□ -1.89
PDGFBP01127 LRRC34P1-201ENST00000542742 915 ntBASIC3.23□□□□□ -1.89
PDGFBP01127 OR4T1P-201ENST00000554933 911 ntBASIC3.23□□□□□ -1.89
PDGFBP01127 OR4K7P-201ENST00000580232 945 ntBASIC3.23□□□□□ -1.89
PDGFBP01127 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC3.23□□□□□ -1.89
PDGFBP01127 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC3.23□□□□□ -1.89
PDGFBP01127 AL031281.1-201ENST00000604049 488 ntBASIC3.23□□□□□ -1.89
PDGFBP01127 PRELID3BP8-201ENST00000604148 295 ntBASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms