Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC4.42□□□□□ -1.7
CNOT4O95628 MIR3942-201ENST00000585264 109 ntBASIC4.42□□□□□ -1.7
CNOT4O95628 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.42□□□□□ -1.7
CNOT4O95628 AL031320.1-201ENST00000604177 357 ntBASIC4.42□□□□□ -1.7
CNOT4O95628 AL592436.1-201ENST00000605135 558 ntBASIC4.42□□□□□ -1.7
CNOT4O95628 AC007546.1-201ENST00000619452 559 ntBASIC4.42□□□□□ -1.7
CNOT4O95628 uc_338.22-201ENST00000622722 187 ntBASIC4.42□□□□□ -1.7
CNOT4O95628 AC091925.1-201ENST00000623204 462 ntBASIC4.42□□□□□ -1.7
CNOT4O95628 AC244517.12-201ENST00000623581 663 ntBASIC4.42□□□□□ -1.7
CNOT4O95628 AC091925.2-201ENST00000625059 256 ntBASIC4.42□□□□□ -1.7
CNOT4O95628 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC4.42□□□□□ -1.7
CNOT4O95628 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
CNOT4O95628 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC4.42□□□□□ -1.7
CNOT4O95628 AC018529.3-201ENST00000624212 2254 ntBASIC4.42□□□□□ -1.7
CNOT4O95628 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
CNOT4O95628 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CNOT4O95628 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CNOT4O95628 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
CNOT4O95628 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
CNOT4O95628 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CNOT4O95628 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
CNOT4O95628 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
CNOT4O95628 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.41□□□□□ -1.7
CNOT4O95628 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CNOT4O95628 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CNOT4O95628 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CNOT4O95628 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
CNOT4O95628 GNAS-202ENST00000306090 477 ntTSL 5 BASIC4.41□□□□□ -1.7
CNOT4O95628 AC007685.1-201ENST00000329806 452 ntBASIC4.41□□□□□ -1.7
CNOT4O95628 RNA5SP502-201ENST00000362694 119 ntBASIC4.41□□□□□ -1.7
CNOT4O95628 RN7SKP95-201ENST00000362860 303 ntBASIC4.41□□□□□ -1.7
CNOT4O95628 SNORA7.2-201ENST00000364446 145 ntBASIC4.41□□□□□ -1.7
CNOT4O95628 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CNOT4O95628 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CNOT4O95628 MIR3074-201ENST00000384885 81 ntBASIC4.41□□□□□ -1.7
CNOT4O95628 AL583834.1-201ENST00000406943 343 ntBASIC4.41□□□□□ -1.7
CNOT4O95628 RNU6-1304P-201ENST00000411374 106 ntBASIC4.41□□□□□ -1.7
CNOT4O95628 CTSL3P-202ENST00000412179 788 ntBASIC4.41□□□□□ -1.7
CNOT4O95628 AC074085.1-201ENST00000413598 418 ntBASIC4.41□□□□□ -1.7
CNOT4O95628 AC007738.1-201ENST00000413892 348 ntBASIC4.41□□□□□ -1.7
CNOT4O95628 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.41□□□□□ -1.7
CNOT4O95628 AC011753.3-201ENST00000443436 406 ntBASIC4.41□□□□□ -1.7
CNOT4O95628 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC4.41□□□□□ -1.7
CNOT4O95628 RPL32P28-201ENST00000443577 397 ntBASIC4.41□□□□□ -1.7
CNOT4O95628 RAC1P7-201ENST00000445367 377 ntBASIC4.41□□□□□ -1.7
CNOT4O95628 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.41□□□□□ -1.7
CNOT4O95628 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC4.41□□□□□ -1.7
CNOT4O95628 RNU6-1208P-201ENST00000459588 107 ntBASIC4.41□□□□□ -1.7
CNOT4O95628 AC106872.2-201ENST00000494303 480 ntBASIC4.41□□□□□ -1.7
CNOT4O95628 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CNOT4O95628 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC4.41□□□□□ -1.7
CNOT4O95628 RPL39P5-202ENST00000512505 151 ntBASIC4.41□□□□□ -1.7
CNOT4O95628 RNA5SP309-201ENST00000516670 106 ntBASIC4.41□□□□□ -1.7
CNOT4O95628 RNU6-273P-201ENST00000516937 96 ntBASIC4.41□□□□□ -1.7
CNOT4O95628 Y_RNA.719-201ENST00000517156 106 ntBASIC4.41□□□□□ -1.7
CNOT4O95628 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC4.41□□□□□ -1.7
CNOT4O95628 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.41□□□□□ -1.7
CNOT4O95628 COPS8P3-201ENST00000526024 482 ntBASIC4.41□□□□□ -1.7
CNOT4O95628 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.41□□□□□ -1.7
CNOT4O95628 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC4.41□□□□□ -1.7
CNOT4O95628 AP000889.2-201ENST00000532684 490 ntBASIC4.41□□□□□ -1.7
CNOT4O95628 TOMM20P2-201ENST00000540082 421 ntBASIC4.41□□□□□ -1.7
CNOT4O95628 AL118558.2-201ENST00000556294 238 ntBASIC4.41□□□□□ -1.7
CNOT4O95628 MIR4703-201ENST00000577728 79 ntBASIC4.41□□□□□ -1.7
CNOT4O95628 COX6CP3-201ENST00000580869 223 ntBASIC4.41□□□□□ -1.7
CNOT4O95628 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC4.41□□□□□ -1.7
CNOT4O95628 AL451044.1-201ENST00000604867 238 ntBASIC4.41□□□□□ -1.7
CNOT4O95628 AC092807.2-201ENST00000609367 243 ntBASIC4.41□□□□□ -1.7
CNOT4O95628 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.41□□□□□ -1.7
CNOT4O95628 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC4.41□□□□□ -1.7
CNOT4O95628 AC112200.1-201ENST00000625015 234 ntBASIC4.41□□□□□ -1.7
CNOT4O95628 AC073869.10-201ENST00000642016 354 ntBASIC4.41□□□□□ -1.7
CNOT4O95628 IRF5P1-201ENST00000504852 2164 ntBASIC4.41□□□□□ -1.7
CNOT4O95628 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.41□□□□□ -1.7
CNOT4O95628 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.41□□□□□ -1.7
CNOT4O95628 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CNOT4O95628 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CNOT4O95628 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CNOT4O95628 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
CNOT4O95628 CD36-221ENST00000534394 1741 ntTSL 2 BASIC4.41□□□□□ -1.7
CNOT4O95628 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC4.4□□□□□ -1.7
CNOT4O95628 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.4□□□□□ -1.7
CNOT4O95628 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.4□□□□□ -1.7
CNOT4O95628 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
CNOT4O95628 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CNOT4O95628 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC4.4□□□□□ -1.71
CNOT4O95628 Y_RNA.28-201ENST00000362554 111 ntBASIC4.4□□□□□ -1.71
CNOT4O95628 SNORA31-201ENST00000362607 130 ntBASIC4.4□□□□□ -1.71
CNOT4O95628 RNU1-32P-201ENST00000363937 159 ntBASIC4.4□□□□□ -1.71
CNOT4O95628 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.71
CNOT4O95628 MIR607-201ENST00000385241 96 ntBASIC4.4□□□□□ -1.71
CNOT4O95628 RNU6-308P-201ENST00000390957 107 ntBASIC4.4□□□□□ -1.71
CNOT4O95628 RN7SKP158-201ENST00000410453 326 ntBASIC4.4□□□□□ -1.71
CNOT4O95628 RPL37P10-201ENST00000412884 288 ntBASIC4.4□□□□□ -1.71
CNOT4O95628 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC4.4□□□□□ -1.71
CNOT4O95628 OR2AS1P-201ENST00000427827 319 ntBASIC4.4□□□□□ -1.71
CNOT4O95628 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC4.4□□□□□ -1.71
CNOT4O95628 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC4.4□□□□□ -1.71
CNOT4O95628 BX323845.1-201ENST00000432417 179 ntBASIC4.4□□□□□ -1.71
CNOT4O95628 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms