Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 NAMPTP2-201ENST00000505629 1115 ntBASIC1.52□□□□□ -2.17
ABCA1O95477 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC1.52□□□□□ -2.17
ABCA1O95477 AC133963.2-201ENST00000513686 578 ntBASIC1.52□□□□□ -2.17
ABCA1O95477 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC1.52□□□□□ -2.17
ABCA1O95477 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC1.52□□□□□ -2.17
ABCA1O95477 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC1.52□□□□□ -2.17
ABCA1O95477 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC1.52□□□□□ -2.17
ABCA1O95477 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC1.52□□□□□ -2.17
ABCA1O95477 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC1.52□□□□□ -2.17
ABCA1O95477 ZNF37BP-203ENST00000452306 1352 ntBASIC1.52□□□□□ -2.17
ABCA1O95477 CNOT6LP1-201ENST00000559681 1462 ntBASIC1.52□□□□□ -2.17
ABCA1O95477 AL137003.2-201ENST00000606924 2538 ntBASIC1.52□□□□□ -2.17
ABCA1O95477 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
ABCA1O95477 RNU6-335P-201ENST00000364563 113 ntBASIC1.52□□□□□ -2.17
ABCA1O95477 SNORA51.11-201ENST00000384442 131 ntBASIC1.52□□□□□ -2.17
ABCA1O95477 HMGN2P35-201ENST00000412164 270 ntBASIC1.52□□□□□ -2.17
ABCA1O95477 DPPA2P1-201ENST00000428060 556 ntBASIC1.52□□□□□ -2.17
ABCA1O95477 PSMA2P3-201ENST00000429685 675 ntBASIC1.52□□□□□ -2.17
ABCA1O95477 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC1.52□□□□□ -2.17
ABCA1O95477 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC1.52□□□□□ -2.17
ABCA1O95477 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC1.52□□□□□ -2.17
ABCA1O95477 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC1.52□□□□□ -2.17
ABCA1O95477 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC1.52□□□□□ -2.17
ABCA1O95477 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC1.52□□□□□ -2.17
ABCA1O95477 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC1.52□□□□□ -2.17
ABCA1O95477 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC1.52□□□□□ -2.17
ABCA1O95477 AC113398.2-201ENST00000507630 558 ntBASIC1.52□□□□□ -2.17
ABCA1O95477 AC107393.1-201ENST00000512403 346 ntBASIC1.52□□□□□ -2.17
ABCA1O95477 RNU6-1308P-201ENST00000516817 103 ntBASIC1.52□□□□□ -2.17
ABCA1O95477 SNORA31.26-201ENST00000517250 137 ntBASIC1.52□□□□□ -2.17
ABCA1O95477 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.52□□□□□ -2.17
ABCA1O95477 MIR3683-201ENST00000580847 82 ntBASIC1.52□□□□□ -2.17
ABCA1O95477 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC1.52□□□□□ -2.17
ABCA1O95477 AC006963.1-201ENST00000624003 1052 ntBASIC1.52□□□□□ -2.17
ABCA1O95477 AC092881.1-201ENST00000638218 2733 ntBASIC1.52□□□□□ -2.17
ABCA1O95477 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
ABCA1O95477 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC1.51□□□□□ -2.17
ABCA1O95477 RNU6-1293P-201ENST00000384077 107 ntBASIC1.51□□□□□ -2.17
ABCA1O95477 RNU2-21P-201ENST00000410368 188 ntBASIC1.51□□□□□ -2.17
ABCA1O95477 RNU2-20P-201ENST00000410425 191 ntBASIC1.51□□□□□ -2.17
ABCA1O95477 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC1.51□□□□□ -2.17
ABCA1O95477 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC1.51□□□□□ -2.17
ABCA1O95477 OR6C72P-201ENST00000451403 892 ntBASIC1.51□□□□□ -2.17
ABCA1O95477 HMGN2P16-201ENST00000456802 261 ntBASIC1.51□□□□□ -2.17
ABCA1O95477 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.51□□□□□ -2.17
ABCA1O95477 RNU7-95P-201ENST00000459222 64 ntBASIC1.51□□□□□ -2.17
ABCA1O95477 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC1.51□□□□□ -2.17
ABCA1O95477 AC022690.1-201ENST00000526681 550 ntBASIC1.51□□□□□ -2.17
ABCA1O95477 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC1.51□□□□□ -2.17
ABCA1O95477 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC1.51□□□□□ -2.17
ABCA1O95477 U6.48-201ENST00000618523 106 ntBASIC1.51□□□□□ -2.17
ABCA1O95477 RNU6-156P-201ENST00000621869 107 ntBASIC1.51□□□□□ -2.17
ABCA1O95477 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC1.51□□□□□ -2.17
ABCA1O95477 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC1.51□□□□□ -2.17
ABCA1O95477 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
ABCA1O95477 AK9-203ENST00000368948 2478 ntTSL 5 BASIC1.51□□□□□ -2.17
ABCA1O95477 VTRNA1-1-201ENST00000363120 99 ntBASIC1.51□□□□□ -2.17
ABCA1O95477 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
ABCA1O95477 RNU4-65P-201ENST00000410473 140 ntBASIC1.51□□□□□ -2.17
ABCA1O95477 AC073264.1-201ENST00000411508 416 ntBASIC1.51□□□□□ -2.17
ABCA1O95477 RPL26P37-201ENST00000411983 438 ntBASIC1.51□□□□□ -2.17
ABCA1O95477 AC023128.2-201ENST00000420880 1223 ntBASIC1.51□□□□□ -2.17
ABCA1O95477 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC1.51□□□□□ -2.17
ABCA1O95477 AL590762.3-201ENST00000436372 640 ntBASIC1.51□□□□□ -2.17
ABCA1O95477 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
ABCA1O95477 XKRY2-201ENST00000442362 1093 ntBASIC1.51□□□□□ -2.17
ABCA1O95477 RPL23AP7-203ENST00000449021 469 ntBASIC1.51□□□□□ -2.17
ABCA1O95477 BUD31P2-201ENST00000449374 300 ntBASIC1.51□□□□□ -2.17
ABCA1O95477 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC1.51□□□□□ -2.17
ABCA1O95477 AL035407.2-201ENST00000454090 378 ntBASIC1.51□□□□□ -2.17
ABCA1O95477 BX322784.1-201ENST00000455793 1077 ntBASIC1.51□□□□□ -2.17
ABCA1O95477 AC079804.2-201ENST00000490376 200 ntBASIC1.51□□□□□ -2.17
ABCA1O95477 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
ABCA1O95477 AC092436.3-201ENST00000511788 257 ntBASIC1.51□□□□□ -2.17
ABCA1O95477 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC1.51□□□□□ -2.17
ABCA1O95477 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.51□□□□□ -2.17
ABCA1O95477 PRELID2P1-201ENST00000552837 301 ntBASIC1.51□□□□□ -2.17
ABCA1O95477 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.51□□□□□ -2.17
ABCA1O95477 AL354943.1-201ENST00000572103 781 ntBASIC1.51□□□□□ -2.17
ABCA1O95477 MIR5089-201ENST00000580047 84 ntBASIC1.51□□□□□ -2.17
ABCA1O95477 MIR4452-201ENST00000583004 71 ntBASIC1.51□□□□□ -2.17
ABCA1O95477 AC013444.2-201ENST00000603317 787 ntBASIC1.51□□□□□ -2.17
ABCA1O95477 KATNBL1P1-201ENST00000605192 748 ntBASIC1.51□□□□□ -2.17
ABCA1O95477 AL390240.1-201ENST00000612950 384 ntBASIC1.51□□□□□ -2.17
ABCA1O95477 AC084768.2-201ENST00000622736 221 ntBASIC1.51□□□□□ -2.17
ABCA1O95477 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC1.51□□□□□ -2.17
ABCA1O95477 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC1.51□□□□□ -2.17
ABCA1O95477 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.5□□□□□ -2.17
ABCA1O95477 ZNF519P1-201ENST00000449011 1626 ntBASIC1.5□□□□□ -2.17
ABCA1O95477 AC080100.1-201ENST00000624239 5356 ntBASIC1.5□□□□□ -2.17
ABCA1O95477 AC099654.7-201ENST00000635788 2127 ntBASIC1.5□□□□□ -2.17
ABCA1O95477 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC1.5□□□□□ -2.17
ABCA1O95477 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC1.5□□□□□ -2.17
ABCA1O95477 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
ABCA1O95477 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC1.5□□□□□ -2.17
ABCA1O95477 RPL21P75-201ENST00000396599 483 ntBASIC1.5□□□□□ -2.17
ABCA1O95477 RPL21P1-201ENST00000399532 476 ntBASIC1.5□□□□□ -2.17
ABCA1O95477 RPL21P28-201ENST00000401418 483 ntBASIC1.5□□□□□ -2.17
ABCA1O95477 AL356057.2-201ENST00000403318 432 ntBASIC1.5□□□□□ -2.17
ABCA1O95477 AL592114.1-201ENST00000403842 483 ntBASIC1.5□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms