Protein–RNA interactions for Protein: O95025

SEMA3D, Semaphorin-3D, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3DO95025 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.55□□□□□ -2
SEMA3DO95025 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.55□□□□□ -2
SEMA3DO95025 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.54□□□□□ -2
SEMA3DO95025 RNU6-236P-201ENST00000363886 106 ntBASIC2.54□□□□□ -2
SEMA3DO95025 RNU1-112P-201ENST00000364401 164 ntBASIC2.54□□□□□ -2
SEMA3DO95025 SNORD51-201ENST00000384320 80 ntBASIC2.54□□□□□ -2
SEMA3DO95025 MIR128-1-201ENST00000384921 82 ntBASIC2.54□□□□□ -2
SEMA3DO95025 ANAPC10P1-201ENST00000395991 556 ntBASIC2.54□□□□□ -2
SEMA3DO95025 AL360182.1-201ENST00000397433 468 ntBASIC2.54□□□□□ -2
SEMA3DO95025 AL079342.2-201ENST00000403367 482 ntBASIC2.54□□□□□ -2
SEMA3DO95025 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC2.54□□□□□ -2
SEMA3DO95025 AC099677.1-201ENST00000420575 175 ntBASIC2.54□□□□□ -2
SEMA3DO95025 AL513175.2-201ENST00000422071 443 ntBASIC2.54□□□□□ -2
SEMA3DO95025 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC2.54□□□□□ -2
SEMA3DO95025 PSMA6P3-201ENST00000428242 164 ntBASIC2.54□□□□□ -2
SEMA3DO95025 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC2.54□□□□□ -2
SEMA3DO95025 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC2.54□□□□□ -2
SEMA3DO95025 PTGES3P1-201ENST00000439531 483 ntBASIC2.54□□□□□ -2
SEMA3DO95025 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC2.54□□□□□ -2
SEMA3DO95025 AL645638.1-201ENST00000440519 361 ntBASIC2.54□□□□□ -2
SEMA3DO95025 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC2.54□□□□□ -2
SEMA3DO95025 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC2.54□□□□□ -2
SEMA3DO95025 ST13P20-201ENST00000447996 1065 ntBASIC2.54□□□□□ -2
SEMA3DO95025 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC2.54□□□□□ -2
SEMA3DO95025 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.54□□□□□ -2
SEMA3DO95025 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.54□□□□□ -2
SEMA3DO95025 snoU109.4-201ENST00000458953 143 ntBASIC2.54□□□□□ -2
SEMA3DO95025 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC2.54□□□□□ -2
SEMA3DO95025 AC126182.1-201ENST00000478134 357 ntBASIC2.54□□□□□ -2
SEMA3DO95025 UBE2Q2P9-201ENST00000490086 202 ntBASIC2.54□□□□□ -2
SEMA3DO95025 CBX3P3-201ENST00000508108 532 ntBASIC2.54□□□□□ -2
SEMA3DO95025 CDC42P4-201ENST00000510507 563 ntBASIC2.54□□□□□ -2
SEMA3DO95025 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC2.54□□□□□ -2
SEMA3DO95025 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC2.54□□□□□ -2
SEMA3DO95025 RNU6-1095P-201ENST00000516148 108 ntBASIC2.54□□□□□ -2
SEMA3DO95025 AC027309.2-201ENST00000520566 192 ntBASIC2.54□□□□□ -2
SEMA3DO95025 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.54□□□□□ -2
SEMA3DO95025 AC068339.2-201ENST00000534395 618 ntBASIC2.54□□□□□ -2
SEMA3DO95025 MGST1-215ENST00000540056 546 ntTSL 3 BASIC2.54□□□□□ -2
SEMA3DO95025 AC018630.1-201ENST00000541376 925 ntBASIC2.54□□□□□ -2
SEMA3DO95025 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC2.54□□□□□ -2
SEMA3DO95025 AC079600.2-201ENST00000550076 130 ntBASIC2.54□□□□□ -2
SEMA3DO95025 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.54□□□□□ -2
SEMA3DO95025 ELOCP29-201ENST00000588193 334 ntBASIC2.54□□□□□ -2
SEMA3DO95025 AL160237.3-201ENST00000604114 1013 ntBASIC2.54□□□□□ -2
SEMA3DO95025 AC106900.2-201ENST00000604994 317 ntBASIC2.54□□□□□ -2
SEMA3DO95025 AP002802.2-201ENST00000605877 235 ntBASIC2.54□□□□□ -2
SEMA3DO95025 AC245517.5-201ENST00000611529 162 ntBASIC2.54□□□□□ -2
SEMA3DO95025 AC126544.2-201ENST00000625174 749 ntBASIC2.54□□□□□ -2
SEMA3DO95025 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
SEMA3DO95025 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.53□□□□□ -2
SEMA3DO95025 Z99496.1-201ENST00000469424 1477 ntBASIC2.53□□□□□ -2
SEMA3DO95025 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.53□□□□□ -2
SEMA3DO95025 SNORA48.2-201ENST00000390926 124 ntBASIC2.53□□□□□ -2
SEMA3DO95025 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC2.53□□□□□ -2
SEMA3DO95025 CYCSP45-201ENST00000402289 315 ntBASIC2.53□□□□□ -2
SEMA3DO95025 UQCRFS1P3-201ENST00000407697 385 ntBASIC2.53□□□□□ -2
SEMA3DO95025 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC2.53□□□□□ -2
SEMA3DO95025 DPRXP1-201ENST00000426312 460 ntBASIC2.53□□□□□ -2
SEMA3DO95025 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC2.53□□□□□ -2
SEMA3DO95025 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC2.53□□□□□ -2
SEMA3DO95025 AC129850.1-201ENST00000436203 508 ntBASIC2.53□□□□□ -2
SEMA3DO95025 MTCYBP42-201ENST00000444653 1130 ntBASIC2.53□□□□□ -2
SEMA3DO95025 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC2.53□□□□□ -2
SEMA3DO95025 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC2.53□□□□□ -2
SEMA3DO95025 AC079776.3-201ENST00000450665 370 ntBASIC2.53□□□□□ -2
SEMA3DO95025 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC2.53□□□□□ -2
SEMA3DO95025 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC2.53□□□□□ -2
SEMA3DO95025 AC092798.1-201ENST00000458542 409 ntBASIC2.53□□□□□ -2
SEMA3DO95025 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC2.53□□□□□ -2
SEMA3DO95025 RPS3AP14-201ENST00000483907 780 ntBASIC2.53□□□□□ -2
SEMA3DO95025 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
SEMA3DO95025 AC097462.2-201ENST00000504623 481 ntBASIC2.53□□□□□ -2
SEMA3DO95025 AC010460.2-201ENST00000509054 677 ntBASIC2.53□□□□□ -2
SEMA3DO95025 RNA5SP282-201ENST00000516355 108 ntBASIC2.53□□□□□ -2
SEMA3DO95025 SNORA31.21-201ENST00000517180 77 ntBASIC2.53□□□□□ -2
SEMA3DO95025 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC2.53□□□□□ -2
SEMA3DO95025 AP001189.2-201ENST00000527320 189 ntBASIC2.53□□□□□ -2
SEMA3DO95025 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC2.53□□□□□ -2
SEMA3DO95025 APAF1-207ENST00000547743 651 ntTSL 3 BASIC2.53□□□□□ -2
SEMA3DO95025 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.53□□□□□ -2
SEMA3DO95025 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC2.53□□□□□ -2
SEMA3DO95025 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.53□□□□□ -2
SEMA3DO95025 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC2.53□□□□□ -2
SEMA3DO95025 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC2.53□□□□□ -2
SEMA3DO95025 AC010738.1-201ENST00000604970 987 ntBASIC2.53□□□□□ -2
SEMA3DO95025 AC135507.2-201ENST00000612443 309 ntBASIC2.53□□□□□ -2
SEMA3DO95025 AC010975.3-201ENST00000618727 978 ntBASIC2.53□□□□□ -2
SEMA3DO95025 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC2.53□□□□□ -2
SEMA3DO95025 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC2.53□□□□□ -2
SEMA3DO95025 U6.101-201ENST00000637707 76 ntBASIC2.53□□□□□ -2
SEMA3DO95025 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
SEMA3DO95025 AC093536.2-201ENST00000565257 1406 ntBASIC2.52□□□□□ -2.01
SEMA3DO95025 AP000526.1-201ENST00000603308 1388 ntBASIC2.52□□□□□ -2.01
SEMA3DO95025 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
SEMA3DO95025 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
SEMA3DO95025 GNG5P1-201ENST00000255500 204 ntBASIC2.52□□□□□ -2.01
SEMA3DO95025 RNU5D-1-201ENST00000363299 116 ntBASIC2.52□□□□□ -2.01
SEMA3DO95025 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC2.52□□□□□ -2.01
SEMA3DO95025 SNRPEP2-201ENST00000397592 279 ntBASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms