Protein–RNA interactions for Protein: O94913

PCF11, Pre-mRNA cleavage complex 2 protein Pcf11, humanhuman

Known RBP Predictions only

Length 1,555 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11O94913 MTND4P13-201ENST00000402078 1023 ntBASIC2.94□□□□□ -1.94
PCF11O94913 AL157827.1-201ENST00000447622 132 ntBASIC2.94□□□□□ -1.94
PCF11O94913 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC2.94□□□□□ -1.94
PCF11O94913 PPP1R2P5-201ENST00000457256 603 ntBASIC2.94□□□□□ -1.94
PCF11O94913 RPS26P21-201ENST00000475397 348 ntBASIC2.94□□□□□ -1.94
PCF11O94913 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC2.94□□□□□ -1.94
PCF11O94913 MTND5P4-201ENST00000514978 288 ntBASIC2.94□□□□□ -1.94
PCF11O94913 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC2.94□□□□□ -1.94
PCF11O94913 AC012360.2-201ENST00000609349 391 ntBASIC2.94□□□□□ -1.94
PCF11O94913 AC010678.1-201ENST00000614118 713 ntBASIC2.94□□□□□ -1.94
PCF11O94913 AC034102.8-201ENST00000615146 484 ntBASIC2.94□□□□□ -1.94
PCF11O94913 AL136164.4-201ENST00000625013 2135 ntBASIC2.94□□□□□ -1.94
PCF11O94913 FAM157B-203ENST00000639350 358 ntBASIC2.94□□□□□ -1.94
PCF11O94913 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
PCF11O94913 MTND4P31-201ENST00000425607 1343 ntBASIC2.94□□□□□ -1.94
PCF11O94913 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.94□□□□□ -1.94
PCF11O94913 AC011978.2-201ENST00000569835 2054 ntBASIC2.93□□□□□ -1.94
PCF11O94913 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
PCF11O94913 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC2.93□□□□□ -1.94
PCF11O94913 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
PCF11O94913 AC027124.2-201ENST00000428249 105 ntBASIC2.93□□□□□ -1.94
PCF11O94913 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC2.93□□□□□ -1.94
PCF11O94913 AC025033.1-201ENST00000463883 194 ntBASIC2.93□□□□□ -1.94
PCF11O94913 NCOR1P1-202ENST00000486162 291 ntBASIC2.93□□□□□ -1.94
PCF11O94913 AC104564.1-201ENST00000493028 407 ntBASIC2.93□□□□□ -1.94
PCF11O94913 TMEM248P1-201ENST00000510579 951 ntBASIC2.93□□□□□ -1.94
PCF11O94913 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC2.93□□□□□ -1.94
PCF11O94913 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC2.93□□□□□ -1.94
PCF11O94913 AC113194.1-201ENST00000606037 500 ntBASIC2.93□□□□□ -1.94
PCF11O94913 AC022709.1-201ENST00000615967 87 ntBASIC2.93□□□□□ -1.94
PCF11O94913 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC2.93□□□□□ -1.94
PCF11O94913 AC103988.1-201ENST00000566382 2177 ntBASIC2.93□□□□□ -1.94
PCF11O94913 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
PCF11O94913 SNORA26.7-201ENST00000391288 122 ntBASIC2.92□□□□□ -1.94
PCF11O94913 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC2.92□□□□□ -1.94
PCF11O94913 RNU4-74P-201ENST00000411280 161 ntBASIC2.92□□□□□ -1.94
PCF11O94913 RPS7P9-201ENST00000414704 586 ntBASIC2.92□□□□□ -1.94
PCF11O94913 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.92□□□□□ -1.94
PCF11O94913 AC023512.1-201ENST00000444513 499 ntBASIC2.92□□□□□ -1.94
PCF11O94913 AC009961.3-201ENST00000449832 765 ntBASIC2.92□□□□□ -1.94
PCF11O94913 AC006483.1-201ENST00000487308 313 ntBASIC2.92□□□□□ -1.94
PCF11O94913 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC2.92□□□□□ -1.94
PCF11O94913 AC021146.7-201ENST00000509604 775 ntBASIC2.92□□□□□ -1.94
PCF11O94913 RNU6-1004P-201ENST00000516584 111 ntBASIC2.92□□□□□ -1.94
PCF11O94913 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC2.92□□□□□ -1.94
PCF11O94913 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC2.92□□□□□ -1.94
PCF11O94913 SNRPGP15-201ENST00000600149 222 ntBASIC2.92□□□□□ -1.94
PCF11O94913 AC092954.1-201ENST00000609121 445 ntBASIC2.92□□□□□ -1.94
PCF11O94913 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC2.92□□□□□ -1.94
PCF11O94913 CKAP2P1-201ENST00000555477 2049 ntBASIC2.92□□□□□ -1.94
PCF11O94913 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
PCF11O94913 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
PCF11O94913 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
PCF11O94913 AC093536.2-201ENST00000565257 1406 ntBASIC2.92□□□□□ -1.94
PCF11O94913 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
PCF11O94913 RNU6-600P-201ENST00000362524 99 ntBASIC2.91□□□□□ -1.94
PCF11O94913 HMGB1P27-201ENST00000431429 603 ntBASIC2.91□□□□□ -1.94
PCF11O94913 CKS1BP5-201ENST00000434172 273 ntBASIC2.91□□□□□ -1.94
PCF11O94913 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC2.91□□□□□ -1.94
PCF11O94913 HMGN2P16-201ENST00000456802 261 ntBASIC2.91□□□□□ -1.94
PCF11O94913 MTND4LP22-201ENST00000508209 276 ntBASIC2.91□□□□□ -1.94
PCF11O94913 RNU1-61P-201ENST00000516107 151 ntBASIC2.91□□□□□ -1.94
PCF11O94913 OR4P1P-201ENST00000530808 1136 ntBASIC2.91□□□□□ -1.94
PCF11O94913 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC2.91□□□□□ -1.94
PCF11O94913 AC002546.1-201ENST00000588041 2504 ntBASIC2.91□□□□□ -1.94
PCF11O94913 MIRLET7G-201ENST00000362280 84 ntBASIC2.91□□□□□ -1.94
PCF11O94913 MIR1294-201ENST00000408503 142 ntBASIC2.91□□□□□ -1.94
PCF11O94913 RPS3AP9-201ENST00000417027 792 ntBASIC2.91□□□□□ -1.94
PCF11O94913 AC234782.4-201ENST00000417646 1048 ntBASIC2.91□□□□□ -1.94
PCF11O94913 PSMA2P3-201ENST00000429685 675 ntBASIC2.91□□□□□ -1.94
PCF11O94913 AL590664.1-201ENST00000448065 339 ntBASIC2.91□□□□□ -1.94
PCF11O94913 AC092155.2-201ENST00000454675 477 ntBASIC2.91□□□□□ -1.94
PCF11O94913 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC2.91□□□□□ -1.94
PCF11O94913 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC2.91□□□□□ -1.94
PCF11O94913 RNA5SP220-201ENST00000516298 104 ntBASIC2.91□□□□□ -1.94
PCF11O94913 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC2.91□□□□□ -1.94
PCF11O94913 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC2.91□□□□□ -1.94
PCF11O94913 AKIRIN1P1-201ENST00000547384 544 ntBASIC2.91□□□□□ -1.94
PCF11O94913 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.91□□□□□ -1.94
PCF11O94913 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC2.91□□□□□ -1.94
PCF11O94913 AC010615.3-201ENST00000597319 394 ntBASIC2.91□□□□□ -1.94
PCF11O94913 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.91□□□□□ -1.94
PCF11O94913 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.91□□□□□ -1.94
PCF11O94913 AL049737.1-201ENST00000413920 1403 ntBASIC2.9□□□□□ -1.94
PCF11O94913 AC012321.1-201ENST00000561622 1588 ntBASIC2.9□□□□□ -1.94
PCF11O94913 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.9□□□□□ -1.94
PCF11O94913 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
PCF11O94913 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.9□□□□□ -1.95
PCF11O94913 Y_RNA.327-201ENST00000365201 102 ntBASIC2.9□□□□□ -1.95
PCF11O94913 RNU6-185P-201ENST00000384421 107 ntBASIC2.9□□□□□ -1.95
PCF11O94913 RPL23AP39-201ENST00000415533 405 ntBASIC2.9□□□□□ -1.95
PCF11O94913 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC2.9□□□□□ -1.95
PCF11O94913 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC2.9□□□□□ -1.95
PCF11O94913 HIGD1AP11-201ENST00000438361 280 ntBASIC2.9□□□□□ -1.95
PCF11O94913 AL513343.1-201ENST00000451818 792 ntBASIC2.9□□□□□ -1.95
PCF11O94913 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
PCF11O94913 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC2.9□□□□□ -1.95
PCF11O94913 RN7SKP277-201ENST00000516895 283 ntBASIC2.9□□□□□ -1.95
PCF11O94913 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.9□□□□□ -1.95
PCF11O94913 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.9□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 121.1 ms