Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 MTCO1P48-201ENST00000448024 1096 ntBASIC0.74□□□□□ -2.29
USH2AO75445 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC0.74□□□□□ -2.29
USH2AO75445 AC104472.2-201ENST00000469035 601 ntBASIC0.74□□□□□ -2.29
USH2AO75445 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC0.74□□□□□ -2.29
USH2AO75445 RNU6-113P-201ENST00000516653 101 ntBASIC0.74□□□□□ -2.29
USH2AO75445 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC0.74□□□□□ -2.29
USH2AO75445 TPMTP1-201ENST00000592307 737 ntBASIC0.74□□□□□ -2.29
USH2AO75445 BMS1P7-201ENST00000602440 1052 ntBASIC0.74□□□□□ -2.29
USH2AO75445 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC0.74□□□□□ -2.29
USH2AO75445 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
USH2AO75445 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
USH2AO75445 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC0.74□□□□□ -2.29
USH2AO75445 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC0.74□□□□□ -2.29
USH2AO75445 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC0.74□□□□□ -2.29
USH2AO75445 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC0.74□□□□□ -2.29
USH2AO75445 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC0.74□□□□□ -2.29
USH2AO75445 HMGB3P21-201ENST00000452483 547 ntBASIC0.74□□□□□ -2.29
USH2AO75445 RN7SL274P-201ENST00000492268 272 ntBASIC0.74□□□□□ -2.29
USH2AO75445 BOLA3P3-201ENST00000505182 232 ntBASIC0.74□□□□□ -2.29
USH2AO75445 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC0.74□□□□□ -2.29
USH2AO75445 HMGB1P47-201ENST00000511281 589 ntBASIC0.74□□□□□ -2.29
USH2AO75445 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC0.74□□□□□ -2.29
USH2AO75445 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC0.74□□□□□ -2.29
USH2AO75445 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC0.74□□□□□ -2.29
USH2AO75445 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC0.74□□□□□ -2.29
USH2AO75445 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC0.74□□□□□ -2.29
USH2AO75445 VN1R74P-201ENST00000613259 503 ntBASIC0.74□□□□□ -2.29
USH2AO75445 AC006026.1-201ENST00000444025 1803 ntBASIC0.74□□□□□ -2.29
USH2AO75445 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC0.74□□□□□ -2.29
USH2AO75445 SNORD6-201ENST00000365444 73 ntBASIC0.73□□□□□ -2.29
USH2AO75445 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC0.73□□□□□ -2.29
USH2AO75445 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC0.73□□□□□ -2.29
USH2AO75445 CBWD4P-201ENST00000445695 655 ntBASIC0.73□□□□□ -2.29
USH2AO75445 OR7L1P-201ENST00000456181 380 ntBASIC0.73□□□□□ -2.29
USH2AO75445 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC0.73□□□□□ -2.29
USH2AO75445 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC0.73□□□□□ -2.29
USH2AO75445 AC112191.3-201ENST00000604371 277 ntBASIC0.73□□□□□ -2.29
USH2AO75445 uc_338.12-201ENST00000616344 181 ntBASIC0.73□□□□□ -2.29
USH2AO75445 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC0.73□□□□□ -2.29
USH2AO75445 AL513331.1-201ENST00000411908 397 ntBASIC0.73□□□□□ -2.29
USH2AO75445 NEFMP1-201ENST00000443423 1006 ntBASIC0.73□□□□□ -2.29
USH2AO75445 ARL5AP2-201ENST00000444698 533 ntBASIC0.73□□□□□ -2.29
USH2AO75445 AL590664.1-201ENST00000448065 339 ntBASIC0.73□□□□□ -2.29
USH2AO75445 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC0.73□□□□□ -2.29
USH2AO75445 TTC39CP1-201ENST00000512513 755 ntBASIC0.73□□□□□ -2.29
USH2AO75445 RNA5SP385-201ENST00000515947 110 ntBASIC0.73□□□□□ -2.29
USH2AO75445 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC0.73□□□□□ -2.29
USH2AO75445 AC104581.2-201ENST00000572227 430 ntBASIC0.73□□□□□ -2.29
USH2AO75445 AC090525.3-201ENST00000605601 189 ntBASIC0.73□□□□□ -2.29
USH2AO75445 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC0.73□□□□□ -2.29
USH2AO75445 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC0.73□□□□□ -2.29
USH2AO75445 MIR6073-201ENST00000352083 89 ntBASIC0.73□□□□□ -2.29
USH2AO75445 RNA5SP160-201ENST00000364866 120 ntBASIC0.73□□□□□ -2.29
USH2AO75445 U3.37-201ENST00000408528 213 ntBASIC0.73□□□□□ -2.29
USH2AO75445 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC0.73□□□□□ -2.29
USH2AO75445 TATDN1P1-201ENST00000414123 891 ntBASIC0.73□□□□□ -2.29
USH2AO75445 TOMM22P1-201ENST00000418578 312 ntBASIC0.73□□□□□ -2.29
USH2AO75445 SNRPFP3-201ENST00000457792 225 ntBASIC0.73□□□□□ -2.29
USH2AO75445 MTCYBP18-201ENST00000501056 747 ntBASIC0.73□□□□□ -2.29
USH2AO75445 HAUS1P1-201ENST00000505275 832 ntBASIC0.73□□□□□ -2.29
USH2AO75445 HMGB3P26-201ENST00000560051 582 ntBASIC0.73□□□□□ -2.29
USH2AO75445 AC135776.4-201ENST00000624300 1904 ntBASIC0.73□□□□□ -2.29
USH2AO75445 MIR409-201ENST00000362237 79 ntBASIC0.73□□□□□ -2.29
USH2AO75445 Z98749.2-208ENST00000381646 500 ntBASIC0.73□□□□□ -2.29
USH2AO75445 EBAG9P1-201ENST00000418955 543 ntBASIC0.73□□□□□ -2.29
USH2AO75445 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC0.73□□□□□ -2.29
USH2AO75445 AC004854.1-201ENST00000440356 349 ntBASIC0.73□□□□□ -2.29
USH2AO75445 SNX5P1-201ENST00000505757 1041 ntBASIC0.73□□□□□ -2.29
USH2AO75445 HMGB3P15-201ENST00000507326 574 ntBASIC0.73□□□□□ -2.29
USH2AO75445 SNORA31.24-201ENST00000517232 57 ntBASIC0.73□□□□□ -2.29
USH2AO75445 DUXAP5-201ENST00000529668 529 ntBASIC0.73□□□□□ -2.29
USH2AO75445 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC0.73□□□□□ -2.29
USH2AO75445 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC0.73□□□□□ -2.29
USH2AO75445 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC0.73□□□□□ -2.29
USH2AO75445 AC098679.5-201ENST00000624394 571 ntBASIC0.73□□□□□ -2.29
USH2AO75445 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC0.73□□□□□ -2.29
USH2AO75445 AC092638.1-201ENST00000411966 1275 ntBASIC0.72□□□□□ -2.29
USH2AO75445 AL591212.2-201ENST00000433923 257 ntBASIC0.72□□□□□ -2.29
USH2AO75445 PSPHP1-201ENST00000450062 261 ntBASIC0.72□□□□□ -2.29
USH2AO75445 RNU4ATAC15P-201ENST00000516415 126 ntBASIC0.72□□□□□ -2.29
USH2AO75445 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC0.72□□□□□ -2.29
USH2AO75445 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC0.72□□□□□ -2.29
USH2AO75445 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC0.72□□□□□ -2.29
USH2AO75445 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC0.72□□□□□ -2.29
USH2AO75445 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC0.72□□□□□ -2.29
USH2AO75445 AC012119.1-201ENST00000603184 222 ntBASIC0.72□□□□□ -2.29
USH2AO75445 RMST_6.1-201ENST00000611980 203 ntBASIC0.72□□□□□ -2.29
USH2AO75445 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC0.72□□□□□ -2.29
USH2AO75445 RNA5SP354-201ENST00000391247 136 ntBASIC0.72□□□□□ -2.29
USH2AO75445 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC0.72□□□□□ -2.29
USH2AO75445 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.72□□□□□ -2.29
USH2AO75445 SEPT7P3-201ENST00000455017 621 ntBASIC0.72□□□□□ -2.29
USH2AO75445 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC0.72□□□□□ -2.29
USH2AO75445 AL627309.6-201ENST00000606857 840 ntBASIC0.72□□□□□ -2.29
USH2AO75445 AC126177.8-201ENST00000618339 1015 ntBASIC0.72□□□□□ -2.29
USH2AO75445 AC010297.1-201ENST00000623948 149 ntBASIC0.72□□□□□ -2.29
USH2AO75445 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC0.72□□□□□ -2.29
USH2AO75445 AL589743.1-201ENST00000551932 2712 ntBASIC0.72□□□□□ -2.29
USH2AO75445 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC0.72□□□□□ -2.29
USH2AO75445 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC0.72□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms