Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 AC079354.2-201ENST00000453523 154 ntBASIC6.22□□□□□ -1.41
RNF40O75150 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC6.22□□□□□ -1.41
RNF40O75150 Y_RNA.650-201ENST00000459002 102 ntBASIC6.22□□□□□ -1.41
RNF40O75150 RN7SL197P-201ENST00000466981 299 ntBASIC6.22□□□□□ -1.41
RNF40O75150 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC6.22□□□□□ -1.41
RNF40O75150 AL136038.1-201ENST00000497246 351 ntBASIC6.22□□□□□ -1.41
RNF40O75150 GLUD1P3-202ENST00000508551 200 ntBASIC6.22□□□□□ -1.41
RNF40O75150 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC6.22□□□□□ -1.41
RNF40O75150 Y_RNA.777-201ENST00000516982 102 ntBASIC6.22□□□□□ -1.41
RNF40O75150 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC6.22□□□□□ -1.41
RNF40O75150 AC051619.2-201ENST00000559063 397 ntBASIC6.22□□□□□ -1.41
RNF40O75150 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC6.22□□□□□ -1.41
RNF40O75150 FAM60BP-201ENST00000578364 658 ntBASIC6.22□□□□□ -1.41
RNF40O75150 COX6CP7-201ENST00000597056 208 ntBASIC6.22□□□□□ -1.41
RNF40O75150 Y_RNA.771-201ENST00000598668 102 ntBASIC6.22□□□□□ -1.41
RNF40O75150 Y_RNA.789-201ENST00000622480 102 ntBASIC6.22□□□□□ -1.41
RNF40O75150 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC6.22□□□□□ -1.41
RNF40O75150 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC6.22□□□□□ -1.41
RNF40O75150 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
RNF40O75150 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
RNF40O75150 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
RNF40O75150 AC092747.4-201ENST00000620519 1861 ntBASIC6.22□□□□□ -1.41
RNF40O75150 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC6.21□□□□□ -1.41
RNF40O75150 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.41
RNF40O75150 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC6.21□□□□□ -1.41
RNF40O75150 AC009962.1-201ENST00000567327 3813 ntBASIC6.21□□□□□ -1.41
RNF40O75150 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.41
RNF40O75150 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
RNF40O75150 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
RNF40O75150 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
RNF40O75150 AC092079.1-201ENST00000558620 1985 ntBASIC6.21□□□□□ -1.42
RNF40O75150 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
RNF40O75150 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
RNF40O75150 Y_RNA.275-201ENST00000364726 110 ntBASIC6.21□□□□□ -1.42
RNF40O75150 Y_RNA.343-201ENST00000365354 112 ntBASIC6.21□□□□□ -1.42
RNF40O75150 Y_RNA.358-201ENST00000365491 99 ntBASIC6.21□□□□□ -1.42
RNF40O75150 RNU6-658P-201ENST00000384606 106 ntBASIC6.21□□□□□ -1.42
RNF40O75150 AL353621.1-201ENST00000418219 243 ntBASIC6.21□□□□□ -1.42
RNF40O75150 RPL30P3-201ENST00000424262 333 ntBASIC6.21□□□□□ -1.42
RNF40O75150 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC6.21□□□□□ -1.42
RNF40O75150 AP000281.1-201ENST00000444036 316 ntBASIC6.21□□□□□ -1.42
RNF40O75150 RPS11P1-201ENST00000451072 473 ntBASIC6.21□□□□□ -1.42
RNF40O75150 FRG2FP-204ENST00000453982 852 ntBASIC6.21□□□□□ -1.42
RNF40O75150 RPS26P39-201ENST00000469206 341 ntBASIC6.21□□□□□ -1.42
RNF40O75150 RPS18P6-201ENST00000476880 458 ntBASIC6.21□□□□□ -1.42
RNF40O75150 AC012123.2-201ENST00000485809 248 ntBASIC6.21□□□□□ -1.42
RNF40O75150 RN7SL629P-201ENST00000489622 285 ntBASIC6.21□□□□□ -1.42
RNF40O75150 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC6.21□□□□□ -1.42
RNF40O75150 RNU6-919P-201ENST00000516731 104 ntBASIC6.21□□□□□ -1.42
RNF40O75150 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC6.21□□□□□ -1.42
RNF40O75150 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC6.21□□□□□ -1.42
RNF40O75150 MIR4776-2-201ENST00000580204 80 ntBASIC6.21□□□□□ -1.42
RNF40O75150 BDH2P1-201ENST00000602288 736 ntBASIC6.21□□□□□ -1.42
RNF40O75150 AC241377.1-201ENST00000619797 406 ntBASIC6.21□□□□□ -1.42
RNF40O75150 AC091895.1-201ENST00000624494 256 ntBASIC6.21□□□□□ -1.42
RNF40O75150 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
RNF40O75150 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
RNF40O75150 AL034546.1-201ENST00000623740 3693 ntBASIC6.21□□□□□ -1.42
RNF40O75150 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
RNF40O75150 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC6.21□□□□□ -1.42
RNF40O75150 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC6.21□□□□□ -1.42
RNF40O75150 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC6.2□□□□□ -1.42
RNF40O75150 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
RNF40O75150 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
RNF40O75150 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
RNF40O75150 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC6.2□□□□□ -1.42
RNF40O75150 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
RNF40O75150 SNORD116-18-201ENST00000383961 92 ntBASIC6.2□□□□□ -1.42
RNF40O75150 SNORD63-201ENST00000384262 68 ntBASIC6.2□□□□□ -1.42
RNF40O75150 AL096829.1-201ENST00000413677 457 ntBASIC6.2□□□□□ -1.42
RNF40O75150 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC6.2□□□□□ -1.42
RNF40O75150 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC6.2□□□□□ -1.42
RNF40O75150 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC6.2□□□□□ -1.42
RNF40O75150 Y_RNA.638-201ENST00000459374 113 ntBASIC6.2□□□□□ -1.42
RNF40O75150 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC6.2□□□□□ -1.42
RNF40O75150 AL590705.4-201ENST00000532209 134 ntBASIC6.2□□□□□ -1.42
RNF40O75150 MDM2-232ENST00000544561 213 ntTSL 5 BASIC6.2□□□□□ -1.42
RNF40O75150 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC6.2□□□□□ -1.42
RNF40O75150 AC007225.2-201ENST00000562529 256 ntBASIC6.2□□□□□ -1.42
RNF40O75150 AC023824.2-201ENST00000566185 400 ntBASIC6.2□□□□□ -1.42
RNF40O75150 MIR4308-201ENST00000580634 81 ntBASIC6.2□□□□□ -1.42
RNF40O75150 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC6.2□□□□□ -1.42
RNF40O75150 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC6.2□□□□□ -1.42
RNF40O75150 AC006115.2-201ENST00000596823 202 ntBASIC6.2□□□□□ -1.42
RNF40O75150 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC6.2□□□□□ -1.42
RNF40O75150 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC6.2□□□□□ -1.42
RNF40O75150 OR9K1P-202ENST00000641111 3217 ntBASIC6.2□□□□□ -1.42
RNF40O75150 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
RNF40O75150 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC6.2□□□□□ -1.42
RNF40O75150 AC125336.1-201ENST00000508893 2827 ntBASIC6.2□□□□□ -1.42
RNF40O75150 TEK-205ENST00000615002 4666 ntTSL 5 BASIC6.2□□□□□ -1.42
RNF40O75150 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
RNF40O75150 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
RNF40O75150 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
RNF40O75150 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
RNF40O75150 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC6.19□□□□□ -1.42
RNF40O75150 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC6.19□□□□□ -1.42
RNF40O75150 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
RNF40O75150 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
RNF40O75150 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms