Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC5.65□□□□□ -1.5
GFRA3O60609 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC5.65□□□□□ -1.5
GFRA3O60609 AC000068.2-201ENST00000608816 460 ntBASIC5.65□□□□□ -1.5
GFRA3O60609 AP001318.4-201ENST00000616637 121 ntBASIC5.65□□□□□ -1.5
GFRA3O60609 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5.65□□□□□ -1.5
GFRA3O60609 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
GFRA3O60609 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
GFRA3O60609 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.65□□□□□ -1.51
GFRA3O60609 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
GFRA3O60609 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.51
GFRA3O60609 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
GFRA3O60609 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
GFRA3O60609 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
GFRA3O60609 C5orf34-201ENST00000306862 2507 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
GFRA3O60609 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
GFRA3O60609 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
GFRA3O60609 AC093010.2-202ENST00000493033 3023 ntTSL 2 BASIC5.64□□□□□ -1.51
GFRA3O60609 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
GFRA3O60609 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
GFRA3O60609 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC5.64□□□□□ -1.51
GFRA3O60609 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC5.64□□□□□ -1.51
GFRA3O60609 OR9K1P-202ENST00000641111 3217 ntBASIC5.64□□□□□ -1.51
GFRA3O60609 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
GFRA3O60609 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
GFRA3O60609 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
GFRA3O60609 RNU6-626P-201ENST00000363354 107 ntBASIC5.64□□□□□ -1.51
GFRA3O60609 RNA5SP335-201ENST00000363817 110 ntBASIC5.64□□□□□ -1.51
GFRA3O60609 RNA5SP87-201ENST00000384155 118 ntBASIC5.64□□□□□ -1.51
GFRA3O60609 RNU6-820P-201ENST00000384273 107 ntBASIC5.64□□□□□ -1.51
GFRA3O60609 RNU6-381P-201ENST00000391259 108 ntBASIC5.64□□□□□ -1.51
GFRA3O60609 MIR541-201ENST00000401360 84 ntBASIC5.64□□□□□ -1.51
GFRA3O60609 ELOCP19-201ENST00000411919 318 ntBASIC5.64□□□□□ -1.51
GFRA3O60609 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC5.64□□□□□ -1.51
GFRA3O60609 TBCAP2-201ENST00000416175 326 ntBASIC5.64□□□□□ -1.51
GFRA3O60609 AC068287.1-201ENST00000430283 295 ntBASIC5.64□□□□□ -1.51
GFRA3O60609 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC5.64□□□□□ -1.51
GFRA3O60609 HIGD1AP2-201ENST00000446367 280 ntBASIC5.64□□□□□ -1.51
GFRA3O60609 RPS20P10-201ENST00000451209 253 ntBASIC5.64□□□□□ -1.51
GFRA3O60609 AL136126.1-201ENST00000473603 402 ntBASIC5.64□□□□□ -1.51
GFRA3O60609 AC117440.1-201ENST00000474107 571 ntBASIC5.64□□□□□ -1.51
GFRA3O60609 HMGB1P21-201ENST00000502313 581 ntBASIC5.64□□□□□ -1.51
GFRA3O60609 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC5.64□□□□□ -1.51
GFRA3O60609 RFPL4AP3-201ENST00000515267 345 ntBASIC5.64□□□□□ -1.51
GFRA3O60609 RNA5SP400-201ENST00000517155 111 ntBASIC5.64□□□□□ -1.51
GFRA3O60609 AC116158.1-201ENST00000560231 2129 ntBASIC5.64□□□□□ -1.51
GFRA3O60609 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC5.64□□□□□ -1.51
GFRA3O60609 TXNP4-201ENST00000575018 310 ntBASIC5.64□□□□□ -1.51
GFRA3O60609 MIR4744-201ENST00000581563 82 ntBASIC5.64□□□□□ -1.51
GFRA3O60609 AC123912.5-201ENST00000605470 343 ntBASIC5.64□□□□□ -1.51
GFRA3O60609 MIR92B-201ENST00000607575 96 ntBASIC5.64□□□□□ -1.51
GFRA3O60609 FTO-223ENST00000640179 210 ntTSL 5 BASIC5.64□□□□□ -1.51
GFRA3O60609 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC5.64□□□□□ -1.51
GFRA3O60609 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
GFRA3O60609 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
GFRA3O60609 AC016251.2-201ENST00000623393 3089 ntBASIC5.64□□□□□ -1.51
GFRA3O60609 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
GFRA3O60609 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
GFRA3O60609 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
GFRA3O60609 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC5.64□□□□□ -1.51
GFRA3O60609 AP000866.6-201ENST00000638898 3579 ntBASIC5.64□□□□□ -1.51
GFRA3O60609 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.64□□□□□ -1.51
GFRA3O60609 AC092593.1-201ENST00000515413 1815 ntBASIC5.64□□□□□ -1.51
GFRA3O60609 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
GFRA3O60609 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
GFRA3O60609 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC5.64□□□□□ -1.51
GFRA3O60609 SLF2-202ENST00000370269 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
GFRA3O60609 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC5.64□□□□□ -1.51
GFRA3O60609 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
GFRA3O60609 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
GFRA3O60609 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC5.64□□□□□ -1.51
GFRA3O60609 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
GFRA3O60609 AIMP1-203ENST00000442366 2519 ntAPPRIS P3 TSL 5 BASIC5.64□□□□□ -1.51
GFRA3O60609 PDE4B-207ENST00000480109 2037 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
GFRA3O60609 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC5.63□□□□□ -1.51
GFRA3O60609 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC5.63□□□□□ -1.51
GFRA3O60609 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
GFRA3O60609 AL596244.1-201ENST00000567068 3779 ntBASIC5.63□□□□□ -1.51
GFRA3O60609 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC5.63□□□□□ -1.51
GFRA3O60609 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC5.63□□□□□ -1.51
GFRA3O60609 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
GFRA3O60609 AMY1B-202ENST00000370080 1787 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
GFRA3O60609 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC5.63□□□□□ -1.51
GFRA3O60609 OTX2-AS1-201ENST00000534909 2428 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
GFRA3O60609 AC130650.2-201ENST00000618736 2403 ntBASIC5.63□□□□□ -1.51
GFRA3O60609 RN7SKP104-201ENST00000362605 328 ntBASIC5.63□□□□□ -1.51
GFRA3O60609 Y_RNA.251-201ENST00000364551 99 ntBASIC5.63□□□□□ -1.51
GFRA3O60609 RPS4XP3-201ENST00000398541 413 ntBASIC5.63□□□□□ -1.51
GFRA3O60609 MIR1193-201ENST00000408109 78 ntBASIC5.63□□□□□ -1.51
GFRA3O60609 SNORA11F-201ENST00000408237 128 ntBASIC5.63□□□□□ -1.51
GFRA3O60609 RNU6-607P-201ENST00000411283 108 ntBASIC5.63□□□□□ -1.51
GFRA3O60609 AL133482.1-201ENST00000415988 498 ntBASIC5.63□□□□□ -1.51
GFRA3O60609 RPL23AP33-201ENST00000442301 452 ntBASIC5.63□□□□□ -1.51
GFRA3O60609 RPS17P13-201ENST00000448974 407 ntBASIC5.63□□□□□ -1.51
GFRA3O60609 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC5.63□□□□□ -1.51
GFRA3O60609 IGLV2-34-201ENST00000490007 283 ntBASIC5.63□□□□□ -1.51
GFRA3O60609 AC146944.2-203ENST00000502493 354 ntBASIC5.63□□□□□ -1.51
GFRA3O60609 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC5.63□□□□□ -1.51
GFRA3O60609 AC139495.1-202ENST00000513164 354 ntBASIC5.63□□□□□ -1.51
GFRA3O60609 DEFB108D-201ENST00000527787 222 ntBASIC5.63□□□□□ -1.51
GFRA3O60609 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms