Protein–RNA interactions for Protein: O15347

HMGB3, High mobility group protein B3, humanhuman

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3O15347 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC1.85□□□□□ -2.11
HMGB3O15347 YME1L1P1-201ENST00000429435 297 ntBASIC1.85□□□□□ -2.11
HMGB3O15347 GTF2IP20-201ENST00000431663 360 ntBASIC1.85□□□□□ -2.11
HMGB3O15347 ARF4P4-201ENST00000439608 520 ntBASIC1.85□□□□□ -2.11
HMGB3O15347 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC1.85□□□□□ -2.11
HMGB3O15347 AC025033.1-201ENST00000463883 194 ntBASIC1.85□□□□□ -2.11
HMGB3O15347 AL358832.1-201ENST00000497800 389 ntBASIC1.85□□□□□ -2.11
HMGB3O15347 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
HMGB3O15347 SNORA67.7-201ENST00000516664 135 ntBASIC1.85□□□□□ -2.11
HMGB3O15347 ZNF705CP-201ENST00000530515 889 ntBASIC1.85□□□□□ -2.11
HMGB3O15347 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC1.85□□□□□ -2.11
HMGB3O15347 CFL2-206ENST00000556161 546 ntTSL 4 BASIC1.85□□□□□ -2.11
HMGB3O15347 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC1.85□□□□□ -2.11
HMGB3O15347 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC1.85□□□□□ -2.11
HMGB3O15347 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC1.85□□□□□ -2.11
HMGB3O15347 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC1.85□□□□□ -2.11
HMGB3O15347 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC1.85□□□□□ -2.11
HMGB3O15347 AL020997.2-201ENST00000602607 184 ntBASIC1.85□□□□□ -2.11
HMGB3O15347 AC013444.2-201ENST00000603317 787 ntBASIC1.85□□□□□ -2.11
HMGB3O15347 AC067747.1-201ENST00000608026 250 ntBASIC1.85□□□□□ -2.11
HMGB3O15347 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC1.85□□□□□ -2.11
HMGB3O15347 AL031601.2-202ENST00000622650 282 ntBASIC1.85□□□□□ -2.11
HMGB3O15347 AC090617.9-201ENST00000623751 147 ntBASIC1.85□□□□□ -2.11
HMGB3O15347 AC010872.1-201ENST00000624225 675 ntBASIC1.85□□□□□ -2.11
HMGB3O15347 AC092608.2-201ENST00000624427 218 ntBASIC1.85□□□□□ -2.11
HMGB3O15347 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC1.85□□□□□ -2.11
HMGB3O15347 AC016717.2-201ENST00000609089 5141 ntBASIC1.85□□□□□ -2.11
HMGB3O15347 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
HMGB3O15347 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
HMGB3O15347 MIR7-3-201ENST00000384898 110 ntBASIC1.84□□□□□ -2.11
HMGB3O15347 ATP5F1P3-201ENST00000397213 657 ntBASIC1.84□□□□□ -2.11
HMGB3O15347 AP002784.2-201ENST00000397300 549 ntBASIC1.84□□□□□ -2.11
HMGB3O15347 RPS3AP24-201ENST00000407896 734 ntBASIC1.84□□□□□ -2.11
HMGB3O15347 AL133384.1-201ENST00000412744 351 ntBASIC1.84□□□□□ -2.11
HMGB3O15347 AL356379.1-201ENST00000414105 126 ntBASIC1.84□□□□□ -2.11
HMGB3O15347 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC1.84□□□□□ -2.11
HMGB3O15347 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC1.84□□□□□ -2.11
HMGB3O15347 RPL23AP16-201ENST00000441715 421 ntBASIC1.84□□□□□ -2.11
HMGB3O15347 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC1.84□□□□□ -2.11
HMGB3O15347 RAC1P7-201ENST00000445367 377 ntBASIC1.84□□□□□ -2.11
HMGB3O15347 TRGVB-201ENST00000453257 471 ntBASIC1.84□□□□□ -2.11
HMGB3O15347 AC092155.2-201ENST00000454675 477 ntBASIC1.84□□□□□ -2.11
HMGB3O15347 ANKRD26P4-201ENST00000455755 950 ntBASIC1.84□□□□□ -2.11
HMGB3O15347 MTND4LP3-201ENST00000468320 276 ntBASIC1.84□□□□□ -2.11
HMGB3O15347 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC1.84□□□□□ -2.11
HMGB3O15347 OR9N1P-202ENST00000494289 481 ntBASIC1.84□□□□□ -2.11
HMGB3O15347 SSR3-208ENST00000496050 579 ntTSL 4 BASIC1.84□□□□□ -2.11
HMGB3O15347 AC093767.1-201ENST00000504523 156 ntBASIC1.84□□□□□ -2.11
HMGB3O15347 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
HMGB3O15347 RNU5A-7P-201ENST00000515979 116 ntBASIC1.84□□□□□ -2.11
HMGB3O15347 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
HMGB3O15347 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.84□□□□□ -2.11
HMGB3O15347 ERP27-202ENST00000540097 993 ntTSL 2 BASIC1.84□□□□□ -2.11
HMGB3O15347 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC1.84□□□□□ -2.11
HMGB3O15347 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC1.84□□□□□ -2.11
HMGB3O15347 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC1.84□□□□□ -2.11
HMGB3O15347 AC105224.1-201ENST00000587055 421 ntBASIC1.84□□□□□ -2.11
HMGB3O15347 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC1.84□□□□□ -2.11
HMGB3O15347 AC135507.1-201ENST00000607214 561 ntBASIC1.84□□□□□ -2.11
HMGB3O15347 AL356585.4-201ENST00000623078 1229 ntBASIC1.84□□□□□ -2.11
HMGB3O15347 VPS8-228ENST00000628962 207 ntTSL 5 BASIC1.84□□□□□ -2.11
HMGB3O15347 OFD1P5Y-201ENST00000447585 2590 ntBASIC1.84□□□□□ -2.12
HMGB3O15347 MTCO1P6-201ENST00000481192 1384 ntBASIC1.84□□□□□ -2.12
HMGB3O15347 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
HMGB3O15347 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
HMGB3O15347 MIR1290-201ENST00000408735 78 ntBASIC1.83□□□□□ -2.12
HMGB3O15347 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC1.83□□□□□ -2.12
HMGB3O15347 NPM1P11-201ENST00000417106 855 ntBASIC1.83□□□□□ -2.12
HMGB3O15347 AL009174.1-201ENST00000426577 416 ntBASIC1.83□□□□□ -2.12
HMGB3O15347 RPL31P54-201ENST00000429803 370 ntBASIC1.83□□□□□ -2.12
HMGB3O15347 FCF1P1-201ENST00000432690 571 ntBASIC1.83□□□□□ -2.12
HMGB3O15347 RPS15AP28-201ENST00000435088 386 ntBASIC1.83□□□□□ -2.12
HMGB3O15347 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC1.83□□□□□ -2.12
HMGB3O15347 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC1.83□□□□□ -2.12
HMGB3O15347 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC1.83□□□□□ -2.12
HMGB3O15347 Z82190.1-201ENST00000454534 490 ntBASIC1.83□□□□□ -2.12
HMGB3O15347 SNORA84-201ENST00000459229 133 ntBASIC1.83□□□□□ -2.12
HMGB3O15347 AC104435.1-201ENST00000483483 166 ntBASIC1.83□□□□□ -2.12
HMGB3O15347 GZMAP1-201ENST00000503054 631 ntBASIC1.83□□□□□ -2.12
HMGB3O15347 AC109464.2-201ENST00000510242 943 ntBASIC1.83□□□□□ -2.12
HMGB3O15347 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC1.83□□□□□ -2.12
HMGB3O15347 RN7SKP24-201ENST00000515888 284 ntBASIC1.83□□□□□ -2.12
HMGB3O15347 RNU6-1282P-201ENST00000516735 96 ntBASIC1.83□□□□□ -2.12
HMGB3O15347 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC1.83□□□□□ -2.12
HMGB3O15347 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC1.83□□□□□ -2.12
HMGB3O15347 ATP5F1P7-201ENST00000567330 760 ntBASIC1.83□□□□□ -2.12
HMGB3O15347 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC1.83□□□□□ -2.12
HMGB3O15347 AL109618.2-201ENST00000605527 211 ntBASIC1.83□□□□□ -2.12
HMGB3O15347 AC007619.2-201ENST00000605743 379 ntBASIC1.83□□□□□ -2.12
HMGB3O15347 BX322635.1-201ENST00000605804 496 ntBASIC1.83□□□□□ -2.12
HMGB3O15347 OR10AB1P-201ENST00000609613 938 ntBASIC1.83□□□□□ -2.12
HMGB3O15347 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC1.83□□□□□ -2.12
HMGB3O15347 AC093838.1-201ENST00000613014 469 ntBASIC1.83□□□□□ -2.12
HMGB3O15347 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC1.83□□□□□ -2.12
HMGB3O15347 AL449363.1-201ENST00000617815 186 ntBASIC1.83□□□□□ -2.12
HMGB3O15347 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC1.83□□□□□ -2.12
HMGB3O15347 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
HMGB3O15347 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.82□□□□□ -2.12
HMGB3O15347 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC1.82□□□□□ -2.12
HMGB3O15347 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms