Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 AC120349.2-201ENST00000625002 298 ntBASIC2.71□□□□□ -1.98
LSM1O15116 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC2.71□□□□□ -1.98
LSM1O15116 MIR3651-201ENST00000630427 90 ntBASIC2.71□□□□□ -1.98
LSM1O15116 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.71□□□□□ -1.98
LSM1O15116 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
LSM1O15116 AC008669.1-201ENST00000565823 2178 ntBASIC2.71□□□□□ -1.98
LSM1O15116 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.71□□□□□ -1.98
LSM1O15116 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.7□□□□□ -1.98
LSM1O15116 AC093536.2-201ENST00000565257 1406 ntBASIC2.7□□□□□ -1.98
LSM1O15116 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
LSM1O15116 MIR1290-201ENST00000408735 78 ntBASIC2.7□□□□□ -1.98
LSM1O15116 DPRXP1-201ENST00000426312 460 ntBASIC2.7□□□□□ -1.98
LSM1O15116 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC2.7□□□□□ -1.98
LSM1O15116 SEPT7P5-201ENST00000434048 306 ntBASIC2.7□□□□□ -1.98
LSM1O15116 TAAR7P-201ENST00000436141 242 ntBASIC2.7□□□□□ -1.98
LSM1O15116 GTF2IP7-202ENST00000436677 309 ntBASIC2.7□□□□□ -1.98
LSM1O15116 AL714022.1-201ENST00000439897 151 ntBASIC2.7□□□□□ -1.98
LSM1O15116 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.7□□□□□ -1.98
LSM1O15116 TRGVB-201ENST00000453257 471 ntBASIC2.7□□□□□ -1.98
LSM1O15116 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.7□□□□□ -1.98
LSM1O15116 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC2.7□□□□□ -1.98
LSM1O15116 RPL7P49-201ENST00000471402 708 ntBASIC2.7□□□□□ -1.98
LSM1O15116 AC116337.2-201ENST00000477662 156 ntBASIC2.7□□□□□ -1.98
LSM1O15116 VN1R104P-201ENST00000505115 1009 ntBASIC2.7□□□□□ -1.98
LSM1O15116 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC2.7□□□□□ -1.98
LSM1O15116 AC017037.2-201ENST00000513850 890 ntBASIC2.7□□□□□ -1.98
LSM1O15116 SNORA31.21-201ENST00000517180 77 ntBASIC2.7□□□□□ -1.98
LSM1O15116 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.7□□□□□ -1.98
LSM1O15116 AC104417.1-201ENST00000523974 751 ntBASIC2.7□□□□□ -1.98
LSM1O15116 AL133271.1-201ENST00000538229 291 ntBASIC2.7□□□□□ -1.98
LSM1O15116 MGST1-215ENST00000540056 546 ntTSL 3 BASIC2.7□□□□□ -1.98
LSM1O15116 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
LSM1O15116 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC2.7□□□□□ -1.98
LSM1O15116 AC079089.3-201ENST00000603094 673 ntBASIC2.7□□□□□ -1.98
LSM1O15116 DUXAP11-201ENST00000603858 526 ntBASIC2.7□□□□□ -1.98
LSM1O15116 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC2.7□□□□□ -1.98
LSM1O15116 AC011890.2-201ENST00000613393 294 ntBASIC2.7□□□□□ -1.98
LSM1O15116 AC109454.4-201ENST00000623411 649 ntBASIC2.7□□□□□ -1.98
LSM1O15116 AC090772.4-201ENST00000623599 362 ntBASIC2.7□□□□□ -1.98
LSM1O15116 MIR1322-201ENST00000638013 71 ntBASIC2.7□□□□□ -1.98
LSM1O15116 TPTE2P4-201ENST00000258589 1605 ntBASIC2.7□□□□□ -1.98
LSM1O15116 ZNF519P1-201ENST00000449011 1626 ntBASIC2.7□□□□□ -1.98
LSM1O15116 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.7□□□□□ -1.98
LSM1O15116 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
LSM1O15116 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.69□□□□□ -1.98
LSM1O15116 Z82209.1-201ENST00000422141 2135 ntBASIC2.69□□□□□ -1.98
LSM1O15116 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.69□□□□□ -1.98
LSM1O15116 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
LSM1O15116 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
LSM1O15116 MIR26A1-201ENST00000362205 77 ntBASIC2.69□□□□□ -1.98
LSM1O15116 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC2.69□□□□□ -1.98
LSM1O15116 RNU6-198P-201ENST00000384258 104 ntBASIC2.69□□□□□ -1.98
LSM1O15116 MIR627-201ENST00000384979 97 ntBASIC2.69□□□□□ -1.98
LSM1O15116 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC2.69□□□□□ -1.98
LSM1O15116 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.69□□□□□ -1.98
LSM1O15116 B3GALNT1P1-201ENST00000420569 975 ntBASIC2.69□□□□□ -1.98
LSM1O15116 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC2.69□□□□□ -1.98
LSM1O15116 C1DP1-201ENST00000426049 402 ntBASIC2.69□□□□□ -1.98
LSM1O15116 MTCO1P3-201ENST00000429327 192 ntBASIC2.69□□□□□ -1.98
LSM1O15116 AC009296.1-201ENST00000443146 155 ntBASIC2.69□□□□□ -1.98
LSM1O15116 AL121871.1-201ENST00000443413 436 ntBASIC2.69□□□□□ -1.98
LSM1O15116 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.69□□□□□ -1.98
LSM1O15116 PNPLA4P1-201ENST00000458328 305 ntBASIC2.69□□□□□ -1.98
LSM1O15116 OR4G11P-201ENST00000492842 939 ntBASIC2.69□□□□□ -1.98
LSM1O15116 AC023424.2-201ENST00000493479 777 ntBASIC2.69□□□□□ -1.98
LSM1O15116 AC083906.5-201ENST00000503722 328 ntBASIC2.69□□□□□ -1.98
LSM1O15116 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC2.69□□□□□ -1.98
LSM1O15116 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC2.69□□□□□ -1.98
LSM1O15116 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
LSM1O15116 AC008716.1-201ENST00000511084 513 ntBASIC2.69□□□□□ -1.98
LSM1O15116 RNA5SP82-201ENST00000516707 92 ntBASIC2.69□□□□□ -1.98
LSM1O15116 MTCO1P47-201ENST00000523889 1271 ntBASIC2.69□□□□□ -1.98
LSM1O15116 OR4R1P-201ENST00000529879 463 ntBASIC2.69□□□□□ -1.98
LSM1O15116 AC087897.1-201ENST00000550134 156 ntBASIC2.69□□□□□ -1.98
LSM1O15116 AL355836.1-201ENST00000555951 870 ntBASIC2.69□□□□□ -1.98
LSM1O15116 H3F3AP1-201ENST00000559984 334 ntBASIC2.69□□□□□ -1.98
LSM1O15116 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC2.69□□□□□ -1.98
LSM1O15116 SRGNP1-201ENST00000603392 451 ntBASIC2.69□□□□□ -1.98
LSM1O15116 AC013553.2-201ENST00000604244 589 ntBASIC2.69□□□□□ -1.98
LSM1O15116 AC080013.4-201ENST00000607624 649 ntBASIC2.69□□□□□ -1.98
LSM1O15116 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.69□□□□□ -1.98
LSM1O15116 AL161629.2-201ENST00000615347 275 ntBASIC2.69□□□□□ -1.98
LSM1O15116 AC006213.4-201ENST00000616184 634 ntBASIC2.69□□□□□ -1.98
LSM1O15116 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.69□□□□□ -1.98
LSM1O15116 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC2.69□□□□□ -1.98
LSM1O15116 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
LSM1O15116 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
LSM1O15116 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.69□□□□□ -1.98
LSM1O15116 AC135776.4-201ENST00000624300 1904 ntBASIC2.69□□□□□ -1.98
LSM1O15116 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.69□□□□□ -1.98
LSM1O15116 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.68□□□□□ -1.98
LSM1O15116 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.68□□□□□ -1.98
LSM1O15116 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.68□□□□□ -1.98
LSM1O15116 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.68□□□□□ -1.98
LSM1O15116 FRG1BP-201ENST00000278882 761 ntBASIC2.68□□□□□ -1.98
LSM1O15116 RNU6-76P-201ENST00000384060 104 ntBASIC2.68□□□□□ -1.98
LSM1O15116 RNA5SP171-201ENST00000391071 115 ntBASIC2.68□□□□□ -1.98
LSM1O15116 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC2.68□□□□□ -1.98
LSM1O15116 BTF3P8-201ENST00000414577 526 ntBASIC2.68□□□□□ -1.98
LSM1O15116 AC080125.1-201ENST00000414888 684 ntBASIC2.68□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 123.6 ms